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The map label for this gene is 119357045

Identifier: 119357045

GI number: 119357045

Start: 1398995

End: 1399867

Strand: Reverse

Name: 119357045

Synonym: Cpha266_1232

Alternate gene names: NA

Gene position: 1399867-1398995 (Counterclockwise)

Preceding gene: 119357050

Following gene: 119357044

Centisome position: 44.67

GC content: 48.57

Gene sequence:

>873_bases
ATGTCTTACGGCGCCGCGTTGTTCTTGTCAATATTTAATCGATCAAATCAGCAGGGCCAAACGCCAACCACTCAATACAT
GAAAATTCTGCCTGTTATCAATTCAAGCTTCCAGACACTGGAACATATCATAAATATTATGCAGGCAGGTACATGGGAGT
GGAATATTCAGACCGGAATCGTTCGCGTCAACCGTTTCTGGTATGCGATGCTCGGCTATGATGAAGCTGAACCTGAAATG
TCGATGCAAGCATGGCAGGATATGATCCATCATGATGATATACAGCATGTTATGGATGCTGTACATGAGCATCTTTCCGG
GGGTACGGCAATTTACCAGTCGGAATTCCGCCTGCGGAATCGCGATGGCGGTTGGGTCTGGGTTCAGGCGAAAGGCAAAA
TCGTCGAGTATGACAATAATCGATCCCCCCTGTATTTCTCCGGCACCCATATCGACATCACGAAACAGAAAACAGACGAA
GATGCTCTTCTGGCAGCCAACAGCAAATACCGGTTTCTCTGCCGCAATACCAGCGATGCGATACTTTTTCTCAAGAACGG
CATTATTGTCGAAGGAAATCCTGGAGCGTTCGAGCTCTTTGGCTGTAAAGACATAAGTCCACTGCTCGATAAGCACCCAG
CAATGATCTCCCCGGAATACCAGCCCGACGGATCAGAAAGCCGGCAAAAAGCCGAAGCGCATATGCAATCCGCTGCATCA
GGCGAACCACAATGCTTTGAATGGGTACATACCCGAATAAATGGAGAGTCGTTCCTTACCGAAGTGCATCTGCAACACAT
CCCCGCCTACGGCGAAGGTTCAATCCTTGCTCTTGTTCGGACACGAAACAAGCAGCTCGTCCAGAACGGATGA

Upstream 100 bases:

>100_bases
TGATGCGACGATATTTTTTTCAATCCCGATAAGTTTATCAGTGCGCCATCCGGAGGACGCGATTCGATTGCTCACGAATT
ATTCACACAAAAAGGGAACC

Downstream 100 bases:

>100_bases
TAGCTATTGTGCCAAAGAAGCCGCCCGCCTGATGCTCAACCCGGCTTGCAGAAGGGAGCACAATCGCCGATGTGTGGCTG
TAAAGTTCTGATCGCAAGCT

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: Diguanylate Cyclase With PAS/PAC Sensor; PAS/PAC Sensor Hybrid Histidine Kinase; Multi-Sensor Signal Transduction Histidine Kinase; Two-Component Hybrid Sensor And Regulator; PAS/PAC Sensor Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; PAS Fold Family; Sensory Box Protein; Signal Transduction Histidine Kinase; PAS Sensor Protein; Diguanylate Cyclase And Metal Dependent Phosphohydrolase; Diguanylate Cyclase/Phosphodiesterase; Sensory Box Histidine Kinase/Response Regulator; Sensor Histidine Kinase; GGDEF Domain-Containing Protein; Diguanylate Cyclase; Sensory Box Histidine Kinase; Signal Transduction Histidine Kinase-Like Protein; Diguanylate Phosphodiesterase; Two-Component Hybrid Sensor Kinase/Response Regulator; Hybrid Sensor Histidine Kinase; HTR-Like Protein; Sensory Box Sensor Histidine Kinase; Pas/Pac Sensor Signal Transduction Histidine Kinase; Two Component LuxR Family Transcriptional Regulator; Signal Transduction Histidine-Protein Kinase BarA; Histidine Kinase; Sensor Protein FixL; Signal-Transducing Histidine Kinase/Response Regulator; Signaling-Like Protein; Diguanylate Cyclase With Pas/Pac Sensor; Signal-Transducing Histidine Kinase; Cyclic Di-GMP Signal Transduction Protein; Signal-Transducing Kinase With PAS/PAC Domain; PAS/PAC Domain-Containing Protein; GGDEF/PAS Domain-Containing Protein; Redox Sensing Protein; Sensor Protein; Ggdef Domain Protein; PasGgdef; Two-Component Sensor Protein; Sensory Box-Containing Diguanylate Cyclase; GGDEF PAS Signalling Domain-Containing Protein; Bacterio-Opsin Activator-Like Protein; Signal Transduction Protein; PAS Domain-Containing Protein; Sensory Box Sensor Histidine Kinase/Response Regulator; Light And Oxygen Sensing Histidine Kinase; Histidine Kinase Sensor Protein; Transcriptional Regulator XRE Family; Multi-Sensor Histidine Kinase; Diguanylate Cyclase With PAS/PAC And GAF Sensors; Sensory Box/GGDEF Family Protein; Diguanylate Cyclase/Phosphodiesterase With; PASGGDEF Domain-Containing Protein; Histidine Protein Kinase; Hybrid Histidine Kinase; PAS/PAC Sensor-Containing Diguanylate Cyclase; Sensory/Regulatory Protein RpfC

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSYGAALFLSIFNRSNQQGQTPTTQYMKILPVINSSFQTLEHIINIMQAGTWEWNIQTGIVRVNRFWYAMLGYDEAEPEM
SMQAWQDMIHHDDIQHVMDAVHEHLSGGTAIYQSEFRLRNRDGGWVWVQAKGKIVEYDNNRSPLYFSGTHIDITKQKTDE
DALLAANSKYRFLCRNTSDAILFLKNGIIVEGNPGAFELFGCKDISPLLDKHPAMISPEYQPDGSESRQKAEAHMQSAAS
GEPQCFEWVHTRINGESFLTEVHLQHIPAYGEGSILALVRTRNKQLVQNG

Sequences:

>Translated_290_residues
MSYGAALFLSIFNRSNQQGQTPTTQYMKILPVINSSFQTLEHIINIMQAGTWEWNIQTGIVRVNRFWYAMLGYDEAEPEM
SMQAWQDMIHHDDIQHVMDAVHEHLSGGTAIYQSEFRLRNRDGGWVWVQAKGKIVEYDNNRSPLYFSGTHIDITKQKTDE
DALLAANSKYRFLCRNTSDAILFLKNGIIVEGNPGAFELFGCKDISPLLDKHPAMISPEYQPDGSESRQKAEAHMQSAAS
GEPQCFEWVHTRINGESFLTEVHLQHIPAYGEGSILALVRTRNKQLVQNG
>Mature_289_residues
SYGAALFLSIFNRSNQQGQTPTTQYMKILPVINSSFQTLEHIINIMQAGTWEWNIQTGIVRVNRFWYAMLGYDEAEPEMS
MQAWQDMIHHDDIQHVMDAVHEHLSGGTAIYQSEFRLRNRDGGWVWVQAKGKIVEYDNNRSPLYFSGTHIDITKQKTDED
ALLAANSKYRFLCRNTSDAILFLKNGIIVEGNPGAFELFGCKDISPLLDKHPAMISPEYQPDGSESRQKAEAHMQSAASG
EPQCFEWVHTRINGESFLTEVHLQHIPAYGEGSILALVRTRNKQLVQNG

Specific function: Unknown

COG id: COG2202

COG function: function code T; FOG: PAS/PAC domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32951; Mature: 32819

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYGAALFLSIFNRSNQQGQTPTTQYMKILPVINSSFQTLEHIINIMQAGTWEWNIQTGI
CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECE
VRVNRFWYAMLGYDEAEPEMSMQAWQDMIHHDDIQHVMDAVHEHLSGGTAIYQSEFRLRN
EEEEHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEC
RDGGWVWVQAKGKIVEYDNNRSPLYFSGTHIDITKQKTDEDALLAANSKYRFLCRNTSDA
CCCCEEEEEECCEEEEECCCCCCEEEECCEEEEECCCCCCCEEEEECCCEEEEEECCCCE
ILFLKNGIIVEGNPGAFELFGCKDISPLLDKHPAMISPEYQPDGSESRQKAEAHMQSAAS
EEEEECCEEEECCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
GEPQCFEWVHTRINGESFLTEVHLQHIPAYGEGSILALVRTRNKQLVQNG
CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHCCC
>Mature Secondary Structure 
SYGAALFLSIFNRSNQQGQTPTTQYMKILPVINSSFQTLEHIINIMQAGTWEWNIQTGI
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECE
VRVNRFWYAMLGYDEAEPEMSMQAWQDMIHHDDIQHVMDAVHEHLSGGTAIYQSEFRLRN
EEEEHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEC
RDGGWVWVQAKGKIVEYDNNRSPLYFSGTHIDITKQKTDEDALLAANSKYRFLCRNTSDA
CCCCEEEEEECCEEEEECCCCCCEEEECCEEEEECCCCCCCEEEEECCCEEEEEECCCCE
ILFLKNGIIVEGNPGAFELFGCKDISPLLDKHPAMISPEYQPDGSESRQKAEAHMQSAAS
EEEEECCEEEECCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
GEPQCFEWVHTRINGESFLTEVHLQHIPAYGEGSILALVRTRNKQLVQNG
CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA