| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is inlA [H]
Identifier: 119357009
GI number: 119357009
Start: 1349493
End: 1350695
Strand: Reverse
Name: inlA [H]
Synonym: Cpha266_1193
Alternate gene names: 119357009
Gene position: 1350695-1349493 (Counterclockwise)
Preceding gene: 119357014
Following gene: 119357006
Centisome position: 43.1
GC content: 43.56
Gene sequence:
>1203_bases TTGGAGCAGAACACCTATAACAAATGCCCGGTATGCAGTTTTCCGCTCTCCCTTGAAAGCGCTGTATGCCCGAGGTGCGG TAATGACATTCTTGAAGATATCTCTTCTCTTGATCAGCAAAGCGAGGAGCTTCATCGAAAAACAATGGATGAAAAAAAAG CCGAATGGTACACCTGGTGTATAACTGAAAATCTCAATATTTCCGATAACGAACTATCGACAAAACCTCCTGATAGAGAG AAGACATCAGAGTCCAGACATCTCTTCTCTACTCCTGATGAACAGGAATTGCTCCGTACCGCATCAAAAGCGATCCTTCT GAAGGATCATTCGTTACGAAAAAAATGGTGGCAAGCGCTCAGTGCCGACTGGAAAGAGGTTATTAAAAACACCATAAAAA TAGTTCGCGAACCCAATGATCAGGAAATCCTTGATTTTTTTCAAACCACTCATTTCCGATGTGACAACAGAAGGATTCAC GACCTCTGGCCAATACGAATACTGGAAAATCTTGTACAACTTCGTTGCGATGAATCGCCGGTTGAAAGTCTTGAACCCCT CGCGCATCTCAGCTCGCTGCAACGAATCTATGCCTTTGATTGTGATTTCTCCTCGCTTGAGCCCCTTCGCAAACTGAAAC ATCTGAAATTGCTCTGGATATCGAGCACCCAGATAAGTAACCTTGACCCTCTCCGTGAACTTACCAGTCTTGAGGAGCTG TACTGTTCGGAAACCCTTGTAAAAGATCTGGATGCACTGGCGGAACTGGTCAATCTTGAAAAGCTCAGTTGTTATAAAAC CGAAATCGCATCTATTGAGCCTCTGGCAAATCTTTCGAACCTTATTGAGTTGGGCATCAACAACTCGAATGTCACCGATA TCCGACCGCTTTCAAAACTTACCGGTATTGAATACCTGCGGTGCAATAAAACAGGAATCATGAATCTTGAACCACTGGCA AACCTTGCAGGACTCAGAGAACTGAGTATTTCAAGAACACGGGTGGAGAGCCTTGAACCTCTTGCGGAACTTATGGAGCT TGAAGAACTTGATTTTTCAAATACGGAAGTACAATCCATTCTCCCCCTCATGCAACTCGAAAAACTTGAAAAAATCGAGC TCTCTGCAGGAACGGTTCCTGAAAAAGAACTGGAAAGATTTATTGAATTGCATCCTGATTGCGAAATTCTTCTGACGCAA TAA
Upstream 100 bases:
>100_bases ATACTATACGAGCGTTTTATATCTCCATATCGCATTTTTTCTTATTATTTTAAGGCAAACGCATCAAAATATTCCCTCAA TGATTTAAGACCCGACCATT
Downstream 100 bases:
>100_bases TGGAATTCGGCTCATAAAAGGCAAAAAAAGGGTGGCAGAAAATCGCCGCCACCTTTTTTACCTTTTATGCTGCCTGCATG CTATCCGATATACATCAGAG
Product: internalin-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MEQNTYNKCPVCSFPLSLESAVCPRCGNDILEDISSLDQQSEELHRKTMDEKKAEWYTWCITENLNISDNELSTKPPDRE KTSESRHLFSTPDEQELLRTASKAILLKDHSLRKKWWQALSADWKEVIKNTIKIVREPNDQEILDFFQTTHFRCDNRRIH DLWPIRILENLVQLRCDESPVESLEPLAHLSSLQRIYAFDCDFSSLEPLRKLKHLKLLWISSTQISNLDPLRELTSLEEL YCSETLVKDLDALAELVNLEKLSCYKTEIASIEPLANLSNLIELGINNSNVTDIRPLSKLTGIEYLRCNKTGIMNLEPLA NLAGLRELSISRTRVESLEPLAELMELEELDFSNTEVQSILPLMQLEKLEKIELSAGTVPEKELERFIELHPDCEILLTQ
Sequences:
>Translated_400_residues MEQNTYNKCPVCSFPLSLESAVCPRCGNDILEDISSLDQQSEELHRKTMDEKKAEWYTWCITENLNISDNELSTKPPDRE KTSESRHLFSTPDEQELLRTASKAILLKDHSLRKKWWQALSADWKEVIKNTIKIVREPNDQEILDFFQTTHFRCDNRRIH DLWPIRILENLVQLRCDESPVESLEPLAHLSSLQRIYAFDCDFSSLEPLRKLKHLKLLWISSTQISNLDPLRELTSLEEL YCSETLVKDLDALAELVNLEKLSCYKTEIASIEPLANLSNLIELGINNSNVTDIRPLSKLTGIEYLRCNKTGIMNLEPLA NLAGLRELSISRTRVESLEPLAELMELEELDFSNTEVQSILPLMQLEKLEKIELSAGTVPEKELERFIELHPDCEILLTQ >Mature_400_residues MEQNTYNKCPVCSFPLSLESAVCPRCGNDILEDISSLDQQSEELHRKTMDEKKAEWYTWCITENLNISDNELSTKPPDRE KTSESRHLFSTPDEQELLRTASKAILLKDHSLRKKWWQALSADWKEVIKNTIKIVREPNDQEILDFFQTTHFRCDNRRIH DLWPIRILENLVQLRCDESPVESLEPLAHLSSLQRIYAFDCDFSSLEPLRKLKHLKLLWISSTQISNLDPLRELTSLEEL YCSETLVKDLDALAELVNLEKLSCYKTEIASIEPLANLSNLIELGINNSNVTDIRPLSKLTGIEYLRCNKTGIMNLEPLA NLAGLRELSISRTRVESLEPLAELMELEELDFSNTEVQSILPLMQLEKLEKIELSAGTVPEKELERFIELHPDCEILLTQ
Specific function: Mediates the entry of Listeria monocytogenes into cells [H]
COG id: COG4886
COG function: function code S; Leucine-rich repeat (LRR) protein
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 14 LRR (leucine-rich) repeats [H]
Homologues:
Organism=Caenorhabditis elegans, GI17554124, Length=224, Percent_Identity=24.1071428571429, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI21358617, Length=182, Percent_Identity=31.8681318681319, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014755 - InterPro: IPR019948 - InterPro: IPR014756 - InterPro: IPR001611 - InterPro: IPR013378 - InterPro: IPR019931 - InterPro: IPR012569 - InterPro: IPR001899 [H]
Pfam domain/function: PF09479 Flg_new; PF00746 Gram_pos_anchor; PF00560 LRR_1; PF08191 LRR_adjacent [H]
EC number: NA
Molecular weight: Translated: 46161; Mature: 46161
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQNTYNKCPVCSFPLSLESAVCPRCGNDILEDISSLDQQSEELHRKTMDEKKAEWYTWC CCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE ITENLNISDNELSTKPPDREKTSESRHLFSTPDEQELLRTASKAILLKDHSLRKKWWQAL EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCHHHHHHHHHHH SADWKEVIKNTIKIVREPNDQEILDFFQTTHFRCDNRRIHDLWPIRILENLVQLRCDESP HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCH VESLEPLAHLSSLQRIYAFDCDFSSLEPLRKLKHLKLLWISSTQISNLDPLRELTSLEEL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHH YCSETLVKDLDALAELVNLEKLSCYKTEIASIEPLANLSNLIELGINNSNVTDIRPLSKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH TGIEYLRCNKTGIMNLEPLANLAGLRELSISRTRVESLEPLAELMELEELDFSNTEVQSI CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LPLMQLEKLEKIELSAGTVPEKELERFIELHPDCEILLTQ HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECC >Mature Secondary Structure MEQNTYNKCPVCSFPLSLESAVCPRCGNDILEDISSLDQQSEELHRKTMDEKKAEWYTWC CCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE ITENLNISDNELSTKPPDREKTSESRHLFSTPDEQELLRTASKAILLKDHSLRKKWWQAL EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCHHHHHHHHHHH SADWKEVIKNTIKIVREPNDQEILDFFQTTHFRCDNRRIHDLWPIRILENLVQLRCDESP HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCH VESLEPLAHLSSLQRIYAFDCDFSSLEPLRKLKHLKLLWISSTQISNLDPLRELTSLEEL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHH YCSETLVKDLDALAELVNLEKLSCYKTEIASIEPLANLSNLIELGINNSNVTDIRPLSKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH TGIEYLRCNKTGIMNLEPLANLAGLRELSISRTRVESLEPLAELMELEELDFSNTEVQSI CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LPLMQLEKLEKIELSAGTVPEKELERFIELHPDCEILLTQ HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9541569 [H]