| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356967
Identifier: 119356967
GI number: 119356967
Start: 1296359
End: 1297138
Strand: Reverse
Name: 119356967
Synonym: Cpha266_1150
Alternate gene names: NA
Gene position: 1297138-1296359 (Counterclockwise)
Preceding gene: 119356976
Following gene: 119356966
Centisome position: 41.39
GC content: 48.85
Gene sequence:
>780_bases ATGCTGTCCGAGAAAATTTCACATTTTGCCGCTGAAGGAATCTCCAGTTTCAGCTTCAGCGAGCTTGAGCAAAGAATCAG CTCTTCTCCCACTGCTCTCAAGTCGGCCTTGCGCCGTTTGATGAAAAAAGGAGAAATTGCGATGCCCTATCAGGGGTTTT ATGTGATTGTCCCCCCTGAATATCGTTCGCTTGGATGCCGCCCGGCAGAGCAGTTCATCCCTGATTTGATGAACTACCTG GGGGAATATTACTATGTCGGGCTTTTGAGTGCTGCGGAGTACCACGGTGCAGCTCATCATCGCCCCCAAGTTTTTCAGGT TATGGTAGCCAAACCGCGAAGAACCATTATCTCCGGCAAAGTTCAGGTCAACTTCATCGTCAGAGGTAATATTGAGGCTA TTCCAACTCAACCACGCAATACGGTATCCGGTATTATGAAACTATCAACGCCAGAAGCGACAGCTTTTGATCTTGCAGGA TATTACAGGCACTGTGGATGGCTGGATAATGTTGCCACCGTGCTGTCGGAAATGGTCGAAGTCATTGATCCCGAAAAGTT GGTGACGGTTGCTGAACTGTCGCCGATAACCTGGGTGCAGCGGCTGGGATATTTATTGGAAACCGTTGGTTCTGAGGAGA TATGGCAGCCACTGGCAGGGTATGTCAACGCCAAAAATCCTGTACGCTCACCCCTGCTACCATCAGCTACAATCAAAGGC GCCAGGTTTAACAAGCGCTGGCAGATTTACGTTAATACCAAAGTGGAGTCAGAGATTTGA
Upstream 100 bases:
>100_bases AAGCAATCGGTGGTAAAGTTCCCCCACTAAAAATGCATATATCATTTGCGAATACAAATAAAAAATAATAGTTTTTGCAA ACAATACATGCAGAAACACT
Downstream 100 bases:
>100_bases TACCTCAAGCCTACATCATTGAATGGCGCAAAAACGCTCCTTGGTCACAGCCCTCTCAAGTTGAACAGGATCTCGTGATA TGCAGGGCTCTGGTAGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MLSEKISHFAAEGISSFSFSELEQRISSSPTALKSALRRLMKKGEIAMPYQGFYVIVPPEYRSLGCRPAEQFIPDLMNYL GEYYYVGLLSAAEYHGAAHHRPQVFQVMVAKPRRTIISGKVQVNFIVRGNIEAIPTQPRNTVSGIMKLSTPEATAFDLAG YYRHCGWLDNVATVLSEMVEVIDPEKLVTVAELSPITWVQRLGYLLETVGSEEIWQPLAGYVNAKNPVRSPLLPSATIKG ARFNKRWQIYVNTKVESEI
Sequences:
>Translated_259_residues MLSEKISHFAAEGISSFSFSELEQRISSSPTALKSALRRLMKKGEIAMPYQGFYVIVPPEYRSLGCRPAEQFIPDLMNYL GEYYYVGLLSAAEYHGAAHHRPQVFQVMVAKPRRTIISGKVQVNFIVRGNIEAIPTQPRNTVSGIMKLSTPEATAFDLAG YYRHCGWLDNVATVLSEMVEVIDPEKLVTVAELSPITWVQRLGYLLETVGSEEIWQPLAGYVNAKNPVRSPLLPSATIKG ARFNKRWQIYVNTKVESEI >Mature_259_residues MLSEKISHFAAEGISSFSFSELEQRISSSPTALKSALRRLMKKGEIAMPYQGFYVIVPPEYRSLGCRPAEQFIPDLMNYL GEYYYVGLLSAAEYHGAAHHRPQVFQVMVAKPRRTIISGKVQVNFIVRGNIEAIPTQPRNTVSGIMKLSTPEATAFDLAG YYRHCGWLDNVATVLSEMVEVIDPEKLVTVAELSPITWVQRLGYLLETVGSEEIWQPLAGYVNAKNPVRSPLLPSATIKG ARFNKRWQIYVNTKVESEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29057; Mature: 29057
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSEKISHFAAEGISSFSFSELEQRISSSPTALKSALRRLMKKGEIAMPYQGFYVIVPPE CCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCCCEEEEECCC YRSLGCRPAEQFIPDLMNYLGEYYYVGLLSAAEYHGAAHHRPQVFQVMVAKPRRTIISGK HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHEEECE VQVNFIVRGNIEAIPTQPRNTVSGIMKLSTPEATAFDLAGYYRHCGWLDNVATVLSEMVE EEEEEEEECCCEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH VIDPEKLVTVAELSPITWVQRLGYLLETVGSEEIWQPLAGYVNAKNPVRSPLLPSATIKG HHCHHHHEEHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC ARFNKRWQIYVNTKVESEI CCCCCEEEEEEECCCCCCC >Mature Secondary Structure MLSEKISHFAAEGISSFSFSELEQRISSSPTALKSALRRLMKKGEIAMPYQGFYVIVPPE CCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCCCEEEEECCC YRSLGCRPAEQFIPDLMNYLGEYYYVGLLSAAEYHGAAHHRPQVFQVMVAKPRRTIISGK HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHEEECE VQVNFIVRGNIEAIPTQPRNTVSGIMKLSTPEATAFDLAGYYRHCGWLDNVATVLSEMVE EEEEEEEECCCEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH VIDPEKLVTVAELSPITWVQRLGYLLETVGSEEIWQPLAGYVNAKNPVRSPLLPSATIKG HHCHHHHEEHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC ARFNKRWQIYVNTKVESEI CCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA