Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is yugP [H]

Identifier: 119356976

GI number: 119356976

Start: 1306173

End: 1306865

Strand: Reverse

Name: yugP [H]

Synonym: Cpha266_1159

Alternate gene names: 119356976

Gene position: 1306865-1306173 (Counterclockwise)

Preceding gene: 119356980

Following gene: 119356967

Centisome position: 41.7

GC content: 53.54

Gene sequence:

>693_bases
ATGTTTTTTGATCCATTATACTTTCTTTTTGCCCTGCCGCCCATGCTTCTTGGTTTGTGGGCTCAGTTCAGGGTTAAATC
GGCTTTCAGCAAATACTCTCAGATCAGAACCAACAGCGGCATCAATGGAGCAGAGGCCGCAAAAAGGATTCTTCTGCGCG
GCGGCTTGCAGAATGTTACCGTAGAGGCCACCAGAGGGTCTCTTTCCGATCACTACGATCCCCGAAGCAAAACCCTGCGT
TTAAGCGAAGAGGTCTATGGGCTTCCAAGCATCGCGGCTGTCGGTGTTGCAGCACACGAAGCCGGTCACGCCCTGCAGGA
CAAGGAGGGCTACAAGCCACTCCGGTTACGAGCGGTTATGGTGCCGGCAGTCTCGCTGGGAAGCAATCTCGGGCCGATTA
TTTTCATGGCCGGACTCTTTCTTGCAGGAACCATCGGCACAACGCTTGCCTGGGTTGGCATTACCCTTTTTGCCGCAGCC
GCGCTCTTTGCGCTCGTTACCCTTCCTGTTGAATTCGATGCAAGCAGACGAGCAAAAGAGCTGCTTGTCTCTCAGGGTAT
AGTTTCAAGCGCTGAAATGGAGGGCGTCAATGCCGTTCTTAATGCCGCAGCTCTGACCTATGTTGCTGCCGCAGCGCAGG
CTGTCATGCAGCTTCTGTACTTCGTCACCCTGATGAACAGAAGGGATTCGTAA

Upstream 100 bases:

>100_bases
ATTTTACTTTTAAGAAACTAATTTTAAAGTTCATATGTTTTTTTGTGATATGATTATTTGAGATAACGATTGATACCATT
AACCGAAGCCATACCGTTCC

Downstream 100 bases:

>100_bases
AGAGCTCTGTATTCACAAGCAGAAACAGTCTTCGGATCGGAAATCCGTTCCGAAACAGAAAGAGTGAACGCTCCAAAACC
AAAAAAACCGGGTACTTGCC

Product: peptidase, membrane zinc metallopeptidase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MFFDPLYFLFALPPMLLGLWAQFRVKSAFSKYSQIRTNSGINGAEAAKRILLRGGLQNVTVEATRGSLSDHYDPRSKTLR
LSEEVYGLPSIAAVGVAAHEAGHALQDKEGYKPLRLRAVMVPAVSLGSNLGPIIFMAGLFLAGTIGTTLAWVGITLFAAA
ALFALVTLPVEFDASRRAKELLVSQGIVSSAEMEGVNAVLNAAALTYVAAAAQAVMQLLYFVTLMNRRDS

Sequences:

>Translated_230_residues
MFFDPLYFLFALPPMLLGLWAQFRVKSAFSKYSQIRTNSGINGAEAAKRILLRGGLQNVTVEATRGSLSDHYDPRSKTLR
LSEEVYGLPSIAAVGVAAHEAGHALQDKEGYKPLRLRAVMVPAVSLGSNLGPIIFMAGLFLAGTIGTTLAWVGITLFAAA
ALFALVTLPVEFDASRRAKELLVSQGIVSSAEMEGVNAVLNAAALTYVAAAAQAVMQLLYFVTLMNRRDS
>Mature_230_residues
MFFDPLYFLFALPPMLLGLWAQFRVKSAFSKYSQIRTNSGINGAEAAKRILLRGGLQNVTVEATRGSLSDHYDPRSKTLR
LSEEVYGLPSIAAVGVAAHEAGHALQDKEGYKPLRLRAVMVPAVSLGSNLGPIIFMAGLFLAGTIGTTLAWVGITLFAAA
ALFALVTLPVEFDASRRAKELLVSQGIVSSAEMEGVNAVLNAAALTYVAAAAQAVMQLLYFVTLMNRRDS

Specific function: Unknown

COG id: COG2738

COG function: function code R; Predicted Zn-dependent protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007395 [H]

Pfam domain/function: PF04298 Zn_peptidase_2 [H]

EC number: NA

Molecular weight: Translated: 24651; Mature: 24651

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFDPLYFLFALPPMLLGLWAQFRVKSAFSKYSQIRTNSGINGAEAAKRILLRGGLQNVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEE
VEATRGSLSDHYDPRSKTLRLSEEVYGLPSIAAVGVAAHEAGHALQDKEGYKPLRLRAVM
EEECCCCCCCCCCCHHHHEEHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
VPAVSLGSNLGPIIFMAGLFLAGTIGTTLAWVGITLFAAAALFALVTLPVEFDASRRAKE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LLVSQGIVSSAEMEGVNAVLNAAALTYVAAAAQAVMQLLYFVTLMNRRDS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFFDPLYFLFALPPMLLGLWAQFRVKSAFSKYSQIRTNSGINGAEAAKRILLRGGLQNVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEE
VEATRGSLSDHYDPRSKTLRLSEEVYGLPSIAAVGVAAHEAGHALQDKEGYKPLRLRAVM
EEECCCCCCCCCCCHHHHEEHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
VPAVSLGSNLGPIIFMAGLFLAGTIGTTLAWVGITLFAAAALFALVTLPVEFDASRRAKE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LLVSQGIVSSAEMEGVNAVLNAAALTYVAAAAQAVMQLLYFVTLMNRRDS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]