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The map label for this gene is yoqW [H]

Identifier: 119356881

GI number: 119356881

Start: 1197332

End: 1198027

Strand: Reverse

Name: yoqW [H]

Synonym: Cpha266_1054

Alternate gene names: 119356881

Gene position: 1198027-1197332 (Counterclockwise)

Preceding gene: 119356882

Following gene: 119356879

Centisome position: 38.23

GC content: 47.84

Gene sequence:

>696_bases
ATGTGCGGCAGGTTCGGATTTTTTGAGCTGAAATATTTCATCGAGTTGCTTCGTCAGCTCGAAATTCCCTTTGAGGAAGA
CGAGACCTATCGTTTCGCGCCGGGGTACAATATTGCGCCTGAAAGTTCTGTAACGGTTCTGCTGGGAAATCACAACACGG
CTACCCTCACCAATGCTCAATGGGGACTGATTCCTCATTGGGCAAAAAGCATTCCAAAAGTTCGCCCGATCAATGCGAGA
AGCGAAAGTCTTGATACAAAGCCCTACTTCAGGCATATGTTCCGTAATAACCACTGCCTGATTCCCGCAAGCGGATTTTA
CGAGTGGAAGCGGACCGAAGAAGCCCGTAAACAGCCTTATTATATTCACCGCACCGATAATCGCCCAATGGCATTTGCCG
CTCTCTGGGATCGATGGAAACCTCCGGAAAAGAATGAAAAACCCATCATTTCCTGCGGTATCATCACCACAGAAGCCAAT
CGTGAAATGCTGAGCGTTCACGACAGGATGCCGGTTATTCTGGAACCTGAAACCTGGAAAGATTGGCTTGAAGCCGGAAA
AACCGGTATCGAAAATCTGCTTCGGCCTGCTCGTGAAGGGACAATTGAACTCTACCCGGTCTCAACGCTGCTGAATAACC
CGCAATACATCAAAAAGAATTGTATCGATCGCCTTGATTCTGAAGCTCCTCTTTAA

Upstream 100 bases:

>100_bases
CTTTACTGCCTGTTGAAACCCGGATCGTGTAATTTTTTATGACTTTTGTTCTGTTTCGTTATACTTTTTATTCAATTGCT
CCACGTCAACAGCTTTGGTT

Downstream 100 bases:

>100_bases
GCGAGTAACGACTGGCCAGGCAACATGAGAACTTTTTTTTGAACATCAATGCAGATCGCAAAGTCCCGCATACGGACCAG
ACTTTGCGATCTGCATTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MCGRFGFFELKYFIELLRQLEIPFEEDETYRFAPGYNIAPESSVTVLLGNHNTATLTNAQWGLIPHWAKSIPKVRPINAR
SESLDTKPYFRHMFRNNHCLIPASGFYEWKRTEEARKQPYYIHRTDNRPMAFAALWDRWKPPEKNEKPIISCGIITTEAN
REMLSVHDRMPVILEPETWKDWLEAGKTGIENLLRPAREGTIELYPVSTLLNNPQYIKKNCIDRLDSEAPL

Sequences:

>Translated_231_residues
MCGRFGFFELKYFIELLRQLEIPFEEDETYRFAPGYNIAPESSVTVLLGNHNTATLTNAQWGLIPHWAKSIPKVRPINAR
SESLDTKPYFRHMFRNNHCLIPASGFYEWKRTEEARKQPYYIHRTDNRPMAFAALWDRWKPPEKNEKPIISCGIITTEAN
REMLSVHDRMPVILEPETWKDWLEAGKTGIENLLRPAREGTIELYPVSTLLNNPQYIKKNCIDRLDSEAPL
>Mature_231_residues
MCGRFGFFELKYFIELLRQLEIPFEEDETYRFAPGYNIAPESSVTVLLGNHNTATLTNAQWGLIPHWAKSIPKVRPINAR
SESLDTKPYFRHMFRNNHCLIPASGFYEWKRTEEARKQPYYIHRTDNRPMAFAALWDRWKPPEKNEKPIISCGIITTEAN
REMLSVHDRMPVILEPETWKDWLEAGKTGIENLLRPAREGTIELYPVSTLLNNPQYIKKNCIDRLDSEAPL

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=238, Percent_Identity=26.4705882352941, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI54607104, Length=238, Percent_Identity=26.4705882352941, Blast_Score=84, Evalue=1e-16,
Organism=Escherichia coli, GI48994894, Length=195, Percent_Identity=30.7692307692308, Blast_Score=92, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6323761, Length=242, Percent_Identity=30.1652892561983, Blast_Score=95, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21355761, Length=228, Percent_Identity=27.1929824561404, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 27009; Mature: 27009

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFGFFELKYFIELLRQLEIPFEEDETYRFAPGYNIAPESSVTVLLGNHNTATLTNAQ
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCEEEEECCC
WGLIPHWAKSIPKVRPINARSESLDTKPYFRHMFRNNHCLIPASGFYEWKRTEEARKQPY
CCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCE
YIHRTDNRPMAFAALWDRWKPPEKNEKPIISCGIITTEANREMLSVHDRMPVILEPETWK
EEEECCCCCEEHHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHCCCCEEECCHHHH
DWLEAGKTGIENLLRPAREGTIELYPVSTLLNNPQYIKKNCIDRLDSEAPL
HHHHHCHHHHHHHHHHHHCCCEEEEEHHHHHCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MCGRFGFFELKYFIELLRQLEIPFEEDETYRFAPGYNIAPESSVTVLLGNHNTATLTNAQ
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCEEEEECCC
WGLIPHWAKSIPKVRPINARSESLDTKPYFRHMFRNNHCLIPASGFYEWKRTEEARKQPY
CCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCE
YIHRTDNRPMAFAALWDRWKPPEKNEKPIISCGIITTEANREMLSVHDRMPVILEPETWK
EEEECCCCCEEHHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHCCCCEEECCHHHH
DWLEAGKTGIENLLRPAREGTIELYPVSTLLNNPQYIKKNCIDRLDSEAPL
HHHHHCHHHHHHHHHHHHCCCEEEEEHHHHHCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]