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The map label for this gene is tnpB [H]

Identifier: 119356882

GI number: 119356882

Start: 1198585

End: 1199217

Strand: Reverse

Name: tnpB [H]

Synonym: Cpha266_1057

Alternate gene names: 119356882

Gene position: 1199217-1198585 (Counterclockwise)

Preceding gene: 119356885

Following gene: 119356881

Centisome position: 38.27

GC content: 51.18

Gene sequence:

>633_bases
TTGCTCCATGACCTTGATCATTACGACTCGGGAGTGCAGAACGGGATCAGCCAAGTCCAGCTCCGGCAGTTACGGCAACT
GCTCTGGCTCGACCAGAACTACAACCTGATCCTTATCGGGCCAAGCGGCACAGGCAAAAGCTATCTTGCCGGCGGGCTCT
GCCATGAAGCCCTCAAACTCGGCTATCACGCACTGTTCCGGACTATGGATGAGCTCATCCAGACCATCAGGTTCAAAGAT
GTTACAACGGCGGCGGCAAGGGAGTACAAACGATTAGTGCATGCGCACCTGCTTGTTATCGACGATATCATGATGTTCCC
GCTTGAAAAAAGTGTAGCTGTCGGCCTGTTCCAGCTCATCAACCAGCTGCATGAACAGACATCATTCATCATTACCACCA
ACAAAAACCCGAAAGAGTGGGCAGAGATGCTGGGCGATGAGGTTCTTGCTACGGCGCTGCTTGATCGGCTGCTCTACAAA
TGCGAAGTCATCAAACTAACCGATAAAAGCTACCGGCTCGAACACCGTACAACCATCTTCGAACAACAGCAACCGGCGGA
AGGAGGCGCCACACGGAAAAAAAAGCTACTATCGCTTCAAAAAGTCGTAGTAGATCATGCTGAAATGACGTAA

Upstream 100 bases:

>100_bases
GCGAACCATCCTATAGCGATTTTGCGCTGGCCCTGCTCGAAACTGAAATCTCCTGCCGACGGAAAATCTTGAACGGCGAC
AGAAAGCAGCCAACCTGCCG

Downstream 100 bases:

>100_bases
TTTAAAGCCGCTGCCTGGGTGATTGCTAATTTCCGAAATTGGCTGATTTTTAATTTCCGACTACAACTGGTCCGGCATTC
TGCGATGGTTCACTTTTCAA

Product: IstB ATP binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MLHDLDHYDSGVQNGISQVQLRQLRQLLWLDQNYNLILIGPSGTGKSYLAGGLCHEALKLGYHALFRTMDELIQTIRFKD
VTTAAAREYKRLVHAHLLVIDDIMMFPLEKSVAVGLFQLINQLHEQTSFIITTNKNPKEWAEMLGDEVLATALLDRLLYK
CEVIKLTDKSYRLEHRTTIFEQQQPAEGGATRKKKLLSLQKVVVDHAEMT

Sequences:

>Translated_210_residues
MLHDLDHYDSGVQNGISQVQLRQLRQLLWLDQNYNLILIGPSGTGKSYLAGGLCHEALKLGYHALFRTMDELIQTIRFKD
VTTAAAREYKRLVHAHLLVIDDIMMFPLEKSVAVGLFQLINQLHEQTSFIITTNKNPKEWAEMLGDEVLATALLDRLLYK
CEVIKLTDKSYRLEHRTTIFEQQQPAEGGATRKKKLLSLQKVVVDHAEMT
>Mature_210_residues
MLHDLDHYDSGVQNGISQVQLRQLRQLLWLDQNYNLILIGPSGTGKSYLAGGLCHEALKLGYHALFRTMDELIQTIRFKD
VTTAAAREYKRLVHAHLLVIDDIMMFPLEKSVAVGLFQLINQLHEQTSFIITTNKNPKEWAEMLGDEVLATALLDRLLYK
CEVIKLTDKSYRLEHRTTIFEQQQPAEGGATRKKKLLSLQKVVVDHAEMT

Specific function: This Protein Is Required For Chromosomal Replication. It Forms, In Concert With DNAb Protein And Other Prepriming Proteins DNAt, N, N', N'' A Prepriming Protein Complex On The Specific Site Of The Template DNA Recognized By Protein N'. [C]

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 24000; Mature: 24000

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHDLDHYDSGVQNGISQVQLRQLRQLLWLDQNYNLILIGPSGTGKSYLAGGLCHEALKL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH
GYHALFRTMDELIQTIRFKDVTTAAAREYKRLVHAHLLVIDDIMMFPLEKSVAVGLFQLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
NQLHEQTSFIITTNKNPKEWAEMLGDEVLATALLDRLLYKCEVIKLTDKSYRLEHRTTIF
HHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHH
EQQQPAEGGATRKKKLLSLQKVVVDHAEMT
HCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLHDLDHYDSGVQNGISQVQLRQLRQLLWLDQNYNLILIGPSGTGKSYLAGGLCHEALKL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH
GYHALFRTMDELIQTIRFKDVTTAAAREYKRLVHAHLLVIDDIMMFPLEKSVAVGLFQLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
NQLHEQTSFIITTNKNPKEWAEMLGDEVLATALLDRLLYKCEVIKLTDKSYRLEHRTTIF
HHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHH
EQQQPAEGGATRKKKLLSLQKVVVDHAEMT
HCCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7517394 [H]