| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is folD [H]
Identifier: 119356824
GI number: 119356824
Start: 1135922
End: 1136848
Strand: Reverse
Name: folD [H]
Synonym: Cpha266_0997
Alternate gene names: 119356824
Gene position: 1136848-1135922 (Counterclockwise)
Preceding gene: 119356833
Following gene: 119356823
Centisome position: 36.28
GC content: 50.38
Gene sequence:
>927_bases ATGGAGTGTGGCATCTCTATAACCATGAAAAAGACCATGATGCAGATTATTGACGGTAAAAAAATTTCTCAGGATCTGAA AAATGAACTGAAAACCGATGTAGCCCACTTTCAGGCGAGCATCGGAAAAGTTCCCGGCCTGACGGTCATTATTGTTGGAC ACGACCCCGCCTCACAGGTTTACGTGCGCAACAAGGCTAAAAGCTGCCTTGAAATTGGCATGCACTCAACCGTCATCGAA ATGCCGCACGACACCCCGCAGGAGACGCTGCTCCAGGCCATCAGAGAACTGAACCAGGATCCGGCCGTACACGGCATTCT GGTTCAGCAGCCGCTGCCGAAACAGATCGACGAGTTTGCCGTCACCCTTGCCATTGACCCATCCAAAGATGTTGACGGGT TTCATCCGGAAAACCTTGGCCGCCTTGTCATGGGCCATCTTGATAAATGTTTTGTCAGTTGCACTCCGTATGGCATTCTC GAACTGCTTGACCGCTACAACATCGAAACCAAAGGAAAACACTGCGTGGTTGTCGGACGAAGCAATATTGTCGGAAAACC CATGGCAAACCTGATGATGCAGAAACTCGATGCAACCAACTGCACTGTTACCGTCTGCCATTCGGCAACCAGAGATATTC CATCTTTTACAAAACAGGCCGACATTCTCATAGCCGCTCTCGGCAAAGCCCGCTTTATTACGGCAGATATGGTCAAACCC GGCGCAGTGGTGATTGATGTAGGGATCAACCGCATTGAAGATCCTTCAACAAAAAGCGGTTACCGTCTGGTTGGAGATGT TGACTATGATGGAGTTGCGGCACTTGCGTCAGCCATAACACCCGTTCCGGGCGGAGTCGGGCCTATGACCATTGCGATGC TGTTGAAAAACACACTCCAGTCGTTCCGCCGCATCAACAACCTTTAG
Upstream 100 bases:
>100_bases TAAAAAACCTAACTTAACAAAAATCAGGCAAATGCAGCGGGCGGAACAAAAGCTGTTGGAGTAAAATGAAAAATCGCGAT ATTGGTTTTAACCCTTACCA
Downstream 100 bases:
>100_bases GAGGCCATGTCCCGTCCAGCAACACGGTATCAATGCACGCAATGCGGCGCAGTGACCCTTAAATATCAGGGGAAATGCTT CGCCTGCCAGAGTTGGGGAA
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MECGISITMKKTMMQIIDGKKISQDLKNELKTDVAHFQASIGKVPGLTVIIVGHDPASQVYVRNKAKSCLEIGMHSTVIE MPHDTPQETLLQAIRELNQDPAVHGILVQQPLPKQIDEFAVTLAIDPSKDVDGFHPENLGRLVMGHLDKCFVSCTPYGIL ELLDRYNIETKGKHCVVVGRSNIVGKPMANLMMQKLDATNCTVTVCHSATRDIPSFTKQADILIAALGKARFITADMVKP GAVVIDVGINRIEDPSTKSGYRLVGDVDYDGVAALASAITPVPGGVGPMTIAMLLKNTLQSFRRINNL
Sequences:
>Translated_308_residues MECGISITMKKTMMQIIDGKKISQDLKNELKTDVAHFQASIGKVPGLTVIIVGHDPASQVYVRNKAKSCLEIGMHSTVIE MPHDTPQETLLQAIRELNQDPAVHGILVQQPLPKQIDEFAVTLAIDPSKDVDGFHPENLGRLVMGHLDKCFVSCTPYGIL ELLDRYNIETKGKHCVVVGRSNIVGKPMANLMMQKLDATNCTVTVCHSATRDIPSFTKQADILIAALGKARFITADMVKP GAVVIDVGINRIEDPSTKSGYRLVGDVDYDGVAALASAITPVPGGVGPMTIAMLLKNTLQSFRRINNL >Mature_308_residues MECGISITMKKTMMQIIDGKKISQDLKNELKTDVAHFQASIGKVPGLTVIIVGHDPASQVYVRNKAKSCLEIGMHSTVIE MPHDTPQETLLQAIRELNQDPAVHGILVQQPLPKQIDEFAVTLAIDPSKDVDGFHPENLGRLVMGHLDKCFVSCTPYGIL ELLDRYNIETKGKHCVVVGRSNIVGKPMANLMMQKLDATNCTVTVCHSATRDIPSFTKQADILIAALGKARFITADMVKP GAVVIDVGINRIEDPSTKSGYRLVGDVDYDGVAALASAITPVPGGVGPMTIAMLLKNTLQSFRRINNL
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=294, Percent_Identity=42.5170068027211, Blast_Score=238, Evalue=6e-63, Organism=Homo sapiens, GI94721354, Length=299, Percent_Identity=45.1505016722408, Blast_Score=233, Evalue=1e-61, Organism=Homo sapiens, GI222418558, Length=296, Percent_Identity=44.2567567567568, Blast_Score=231, Evalue=9e-61, Organism=Homo sapiens, GI36796743, Length=202, Percent_Identity=30.1980198019802, Blast_Score=84, Evalue=1e-16, Organism=Escherichia coli, GI1786741, Length=287, Percent_Identity=48.0836236933798, Blast_Score=253, Evalue=1e-68, Organism=Caenorhabditis elegans, GI17568735, Length=263, Percent_Identity=42.5855513307985, Blast_Score=198, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6319558, Length=301, Percent_Identity=43.5215946843854, Blast_Score=251, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6321643, Length=299, Percent_Identity=42.1404682274247, Blast_Score=243, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6322933, Length=327, Percent_Identity=26.9113149847095, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI17136816, Length=298, Percent_Identity=48.3221476510067, Blast_Score=263, Evalue=8e-71, Organism=Drosophila melanogaster, GI17136818, Length=298, Percent_Identity=48.3221476510067, Blast_Score=263, Evalue=9e-71, Organism=Drosophila melanogaster, GI62472483, Length=300, Percent_Identity=45.6666666666667, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI45551871, Length=300, Percent_Identity=45.6666666666667, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI24645718, Length=294, Percent_Identity=46.2585034013605, Blast_Score=255, Evalue=3e-68, Organism=Drosophila melanogaster, GI17137370, Length=294, Percent_Identity=46.2585034013605, Blast_Score=255, Evalue=3e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 33437; Mature: 33437
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECGISITMKKTMMQIIDGKKISQDLKNELKTDVAHFQASIGKVPGLTVIIVGHDPASQV CCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH YVRNKAKSCLEIGMHSTVIEMPHDTPQETLLQAIRELNQDPAVHGILVQQPLPKQIDEFA HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHEE VTLAIDPSKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLDRYNIETKGKHCVVVGR EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEC SNIVGKPMANLMMQKLDATNCTVTVCHSATRDIPSFTKQADILIAALGKARFITADMVKP CCCCCCHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHEEECCCCCEEECCCCCC GAVVIDVGINRIEDPSTKSGYRLVGDVDYDGVAALASAITPVPGGVGPMTIAMLLKNTLQ CEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH SFRRINNL HHHHHCCC >Mature Secondary Structure MECGISITMKKTMMQIIDGKKISQDLKNELKTDVAHFQASIGKVPGLTVIIVGHDPASQV CCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH YVRNKAKSCLEIGMHSTVIEMPHDTPQETLLQAIRELNQDPAVHGILVQQPLPKQIDEFA HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHEE VTLAIDPSKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLDRYNIETKGKHCVVVGR EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEC SNIVGKPMANLMMQKLDATNCTVTVCHSATRDIPSFTKQADILIAALGKARFITADMVKP CCCCCCHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHEEECCCCCEEECCCCCC GAVVIDVGINRIEDPSTKSGYRLVGDVDYDGVAALASAITPVPGGVGPMTIAMLLKNTLQ CEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH SFRRINNL HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA