| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is bchC [H]
Identifier: 119356821
GI number: 119356821
Start: 1133099
End: 1134055
Strand: Reverse
Name: bchC [H]
Synonym: Cpha266_0994
Alternate gene names: 119356821
Gene position: 1134055-1133099 (Counterclockwise)
Preceding gene: 119356822
Following gene: 119356820
Centisome position: 36.19
GC content: 47.75
Gene sequence:
>957_bases ATGCAGGGTGACGCAAAAGCAATTGTCTTTCAGAAAGCCAATAAAATGAAGTTGCAATCTGTACCATATCGGGCAGATCA AGCAGAGGATGTTCTGGTTAAAACTATTGCAAGCACCATTACTCCGGGACACGACAGGCTTCTTCTCACCAATAAACCGG TATCACACAGAGTCCTTAACTATCCGCTGATGCCAGGAAGCGAATCTATCGGCCAGGTTATTGCAACCGGTTCCGGTGTA ACCGATCTTCATCCTGGAGATTTTGTCTATACATTCAAAGGAAACCGGTGGGAGGGAATCGAGCCCTATTACGGCTGCCA TGGCGAAGTCATTCCGACATCACGAAATAATCTGCTCCCGCTTGGTCGTCAGCCTATTCACCGGGATCTATTGACCGGGC TGCTTGGCTATGCGATAAGCGCTCTCGAAAAAGTCAACATCAACAAGGATTCAAGGATACTCATTGTCGGTCTCGGATCG GTAGGCCTTATGGTTTCAGAATACCTCTACAGTATTGGCGTCAGGCATATTGATGCCGTTGAAACCTTCAGCATCAGGGG ACAACTCTCATCTGCAGAACATATCGCACTTGATATCGGCGACTTTACGGCCGAATTCAACGACTGTTTCGATATGGTGA TTGAATGTACGGGACGCATTCTCATGATTGAAAAAGCCGTACGCCTCATGAAACCAGGAGCAACTGTCCTGCTGATGGGC AATTATGAGGTCATGGGGTATGATTATCGCCTGATTCAGCAAAAGGAACCAGCCATCGTCTGTTCCTGCCTCACCGCACC GGAGCACATGCAGAAAGCCCTGGCTGTGCTTGAAAACAATCAGTTCGATACCGAAAAGTTCTTTACCCATGTATTTCCTG TCAGCCAGTTTGAACTCGCCTATCGCATGGCGCTTGACAGCAAGGAGTCCATTAAAACAGTCATAAGCTGGGTATAG
Upstream 100 bases:
>100_bases GGGCAGTAGCAGGATCCCTTGTTATCAGCTTGATTTCATGGGTTCTCGGATCTTTTCTGATGCCATAATCAATAACGCAT ACAGCAATAAATTTTCGACC
Downstream 100 bases:
>100_bases GATGAACCTATGGGCATCTCTACGGCGGAAGCAGTAGGCCTTACTGCTGTCTCAAAAACATTCGGCACCTGTAAGGCAAA CCACAACATTTCGCTCTCCA
Product: alcohol dehydrogenase
Products: L-tagatose phosphate; NADH [C]
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MQGDAKAIVFQKANKMKLQSVPYRADQAEDVLVKTIASTITPGHDRLLLTNKPVSHRVLNYPLMPGSESIGQVIATGSGV TDLHPGDFVYTFKGNRWEGIEPYYGCHGEVIPTSRNNLLPLGRQPIHRDLLTGLLGYAISALEKVNINKDSRILIVGLGS VGLMVSEYLYSIGVRHIDAVETFSIRGQLSSAEHIALDIGDFTAEFNDCFDMVIECTGRILMIEKAVRLMKPGATVLLMG NYEVMGYDYRLIQQKEPAIVCSCLTAPEHMQKALAVLENNQFDTEKFFTHVFPVSQFELAYRMALDSKESIKTVISWV
Sequences:
>Translated_318_residues MQGDAKAIVFQKANKMKLQSVPYRADQAEDVLVKTIASTITPGHDRLLLTNKPVSHRVLNYPLMPGSESIGQVIATGSGV TDLHPGDFVYTFKGNRWEGIEPYYGCHGEVIPTSRNNLLPLGRQPIHRDLLTGLLGYAISALEKVNINKDSRILIVGLGS VGLMVSEYLYSIGVRHIDAVETFSIRGQLSSAEHIALDIGDFTAEFNDCFDMVIECTGRILMIEKAVRLMKPGATVLLMG NYEVMGYDYRLIQQKEPAIVCSCLTAPEHMQKALAVLENNQFDTEKFFTHVFPVSQFELAYRMALDSKESIKTVISWV >Mature_318_residues MQGDAKAIVFQKANKMKLQSVPYRADQAEDVLVKTIASTITPGHDRLLLTNKPVSHRVLNYPLMPGSESIGQVIATGSGV TDLHPGDFVYTFKGNRWEGIEPYYGCHGEVIPTSRNNLLPLGRQPIHRDLLTGLLGYAISALEKVNINKDSRILIVGLGS VGLMVSEYLYSIGVRHIDAVETFSIRGQLSSAEHIALDIGDFTAEFNDCFDMVIECTGRILMIEKAVRLMKPGATVLLMG NYEVMGYDYRLIQQKEPAIVCSCLTAPEHMQKALAVLENNQFDTEKFFTHVFPVSQFELAYRMALDSKESIKTVISWV
Specific function: This protein catalyzes the penultimate step in bacteriochlorophyll a biosynthesis [H]
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR005903 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N [H]
EC number: 1.1.1.251 [C]
Molecular weight: Translated: 35343; Mature: 35343
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGDAKAIVFQKANKMKLQSVPYRADQAEDVLVKTIASTITPGHDRLLLTNKPVSHRVLN CCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHEE YPLMPGSESIGQVIATGSGVTDLHPGDFVYTFKGNRWEGIEPYYGCHGEVIPTSRNNLLP CCCCCCCHHHHHHEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCC LGRQPIHRDLLTGLLGYAISALEKVNINKDSRILIVGLGSVGLMVSEYLYSIGVRHIDAV CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHCCHH ETFSIRGQLSSAEHIALDIGDFTAEFNDCFDMVIECTGRILMIEKAVRLMKPGATVLLMG HEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCEEEEEE NYEVMGYDYRLIQQKEPAIVCSCLTAPEHMQKALAVLENNQFDTEKFFTHVFPVSQFELA CEEEEECCEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH YRMALDSKESIKTVISWV HHHHCCCHHHHHHHHHCC >Mature Secondary Structure MQGDAKAIVFQKANKMKLQSVPYRADQAEDVLVKTIASTITPGHDRLLLTNKPVSHRVLN CCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHEE YPLMPGSESIGQVIATGSGVTDLHPGDFVYTFKGNRWEGIEPYYGCHGEVIPTSRNNLLP CCCCCCCHHHHHHEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCC LGRQPIHRDLLTGLLGYAISALEKVNINKDSRILIVGLGSVGLMVSEYLYSIGVRHIDAV CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHCCHH ETFSIRGQLSSAEHIALDIGDFTAEFNDCFDMVIECTGRILMIEKAVRLMKPGATVLLMG HEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCEEEEEE NYEVMGYDYRLIQQKEPAIVCSCLTAPEHMQKALAVLENNQFDTEKFFTHVFPVSQFELA CEEEEECCEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH YRMALDSKESIKTVISWV HHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Galactitol-phosphate; NAD+ [C]
Specific reaction: Galactitol-phosphate + NAD+ = L-tagatose phosphate + NADH [C]
General reaction: Oxidation; Reduction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8437569; 10648776 [H]