| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356822
Identifier: 119356822
GI number: 119356822
Start: 1134088
End: 1134429
Strand: Reverse
Name: 119356822
Synonym: Cpha266_0995
Alternate gene names: NA
Gene position: 1134429-1134088 (Counterclockwise)
Preceding gene: 119356823
Following gene: 119356821
Centisome position: 36.2
GC content: 46.49
Gene sequence:
>342_bases ATGATACAAATCCTCATTCTTTGGCTTATCAACGCTGTTGCCGTGTATGCCACCGCCCATCTTCTGGGTGGCATTCATGT AAAAAGTTTCGGCGCAGCAATCATTGTGGCACTGATACTCGGACTCGTCAATGCTATTGTAAGGCCGGTACTCGTCTTTT TGTCAATCCCGTTCATCATTGTGACGCTTGGGCTCTTCCTGCTTGTCATCAATGCCCTGATGCTGCAATTATCAGCCTCT CTGGTCAACGGTTTTTCTATTGACAGTTTCTGGTGGGCAGTAGCAGGATCCCTTGTTATCAGCTTGATTTCATGGGTTCT CGGATCTTTTCTGATGCCATAA
Upstream 100 bases:
>100_bases CAATCGCTCTGTTCACAGGGTATTTCTTTTTCCTCTCCGTCTTCTTACATTGTCACAATATGAAAAATACAGAACAAGAA CACCCGCAGCCGGAGCGATC
Downstream 100 bases:
>100_bases TCAATAACGCATACAGCAATAAATTTTCGACCATGCAGGGTGACGCAAAAGCAATTGTCTTTCAGAAAGCCAATAAAATG AAGTTGCAATCTGTACCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MIQILILWLINAVAVYATAHLLGGIHVKSFGAAIIVALILGLVNAIVRPVLVFLSIPFIIVTLGLFLLVINALMLQLSAS LVNGFSIDSFWWAVAGSLVISLISWVLGSFLMP
Sequences:
>Translated_113_residues MIQILILWLINAVAVYATAHLLGGIHVKSFGAAIIVALILGLVNAIVRPVLVFLSIPFIIVTLGLFLLVINALMLQLSAS LVNGFSIDSFWWAVAGSLVISLISWVLGSFLMP >Mature_113_residues MIQILILWLINAVAVYATAHLLGGIHVKSFGAAIIVALILGLVNAIVRPVLVFLSIPFIIVTLGLFLLVINALMLQLSAS LVNGFSIDSFWWAVAGSLVISLISWVLGSFLMP
Specific function: Unknown
COG id: COG1950
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007165 [H]
Pfam domain/function: PF04020 DUF360 [H]
EC number: NA
Molecular weight: Translated: 12098; Mature: 12098
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQILILWLINAVAVYATAHLLGGIHVKSFGAAIIVALILGLVNAIVRPVLVFLSIPFII CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTLGLFLLVINALMLQLSASLVNGFSIDSFWWAVAGSLVISLISWVLGSFLMP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIQILILWLINAVAVYATAHLLGGIHVKSFGAAIIVALILGLVNAIVRPVLVFLSIPFII CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTLGLFLLVINALMLQLSASLVNGFSIDSFWWAVAGSLVISLISWVLGSFLMP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8550407; 12000953 [H]