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The map label for this gene is ygaF [H]

Identifier: 119356712

GI number: 119356712

Start: 1008735

End: 1009205

Strand: Direct

Name: ygaF [H]

Synonym: Cpha266_0884

Alternate gene names: 119356712

Gene position: 1008735-1009205 (Clockwise)

Preceding gene: 119356710

Following gene: 119356713

Centisome position: 32.19

GC content: 41.19

Gene sequence:

>471_bases
ATGTCATTACTGCAAGAGGGCTCAGTCGCGCCGCCGATAACAACAATAGATCAGCACGGAAAAAACGTAACGCTGCATGA
ATATAAAGGAAAAAAAGTAGTCTTGTATTTCTATCCCAAGGATGATACCCCTGGATGTACGAAGGAAGCTTGCGCATTTC
GCGATAATTTGCCTAACTTTAACAATCTGGATGCTGAAATTCTTGGCGTAAGTGTTGACAGTGTTGAAAAACACAAAAAA
TTTGCTGAAAAATATACGCTACCCTTCCGCCTTCTTGTTGACGATGAGAAAAAAATCGTACAAGACTATGGCGTATGGGG
TCTGAAAAAGTTTATGGGTAAGGAGTATATGGGTATCAACAGAGTCACCTATCTGATCAATGAAGAGGGGGTGATTGAAA
AAGTATGGCCGAAAGTTTCTCCGGCAGGACATGCCGAAGAGATATTGAACTATTTGCAGCAAAAAACGTGA

Upstream 100 bases:

>100_bases
GAAAGAATACGGTTTCATTATCAGATAAGTGGGAAACTTTTTGTGACAGCTCGTTATTTAACAAGGGTAAACATTCAAGC
AACATAAATTAGTTTCACGC

Downstream 100 bases:

>100_bases
CAGAACACGCATGGTAAACGAATTTGAAAAACTTCAGTCAGGCAAACTGCTCCTTGCTTCAGCAAATCTTCTTGAATCAA
ATTTCAAGAGAACGGTGCTG

Product: redoxin domain-containing protein

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSLLQEGSVAPPITTIDQHGKNVTLHEYKGKKVVLYFYPKDDTPGCTKEACAFRDNLPNFNNLDAEILGVSVDSVEKHKK
FAEKYTLPFRLLVDDEKKIVQDYGVWGLKKFMGKEYMGINRVTYLINEEGVIEKVWPKVSPAGHAEEILNYLQQKT

Sequences:

>Translated_156_residues
MSLLQEGSVAPPITTIDQHGKNVTLHEYKGKKVVLYFYPKDDTPGCTKEACAFRDNLPNFNNLDAEILGVSVDSVEKHKK
FAEKYTLPFRLLVDDEKKIVQDYGVWGLKKFMGKEYMGINRVTYLINEEGVIEKVWPKVSPAGHAEEILNYLQQKT
>Mature_155_residues
SLLQEGSVAPPITTIDQHGKNVTLHEYKGKKVVLYFYPKDDTPGCTKEACAFRDNLPNFNNLDAEILGVSVDSVEKHKKF
AEKYTLPFRLLVDDEKKIVQDYGVWGLKKFMGKEYMGINRVTYLINEEGVIEKVWPKVSPAGHAEEILNYLQQKT

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI32189392, Length=148, Percent_Identity=35.8108108108108, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI4505591, Length=145, Percent_Identity=33.1034482758621, Blast_Score=71, Evalue=3e-13,
Organism=Homo sapiens, GI32455266, Length=145, Percent_Identity=33.1034482758621, Blast_Score=71, Evalue=3e-13,
Organism=Homo sapiens, GI32455264, Length=145, Percent_Identity=33.1034482758621, Blast_Score=71, Evalue=3e-13,
Organism=Homo sapiens, GI32483377, Length=157, Percent_Identity=31.8471337579618, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI5802974, Length=134, Percent_Identity=33.5820895522388, Blast_Score=64, Evalue=8e-11,
Organism=Escherichia coli, GI1788825, Length=154, Percent_Identity=42.2077922077922, Blast_Score=146, Evalue=6e-37,
Organism=Saccharomyces cerevisiae, GI6322180, Length=109, Percent_Identity=35.7798165137615, Blast_Score=74, Evalue=8e-15,
Organism=Drosophila melanogaster, GI17738015, Length=149, Percent_Identity=32.2147651006711, Blast_Score=70, Evalue=4e-13,
Organism=Drosophila melanogaster, GI17157991, Length=141, Percent_Identity=30.4964539007092, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24641739, Length=141, Percent_Identity=30.4964539007092, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17795; Mature: 17663

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLQEGSVAPPITTIDQHGKNVTLHEYKGKKVVLYFYPKDDTPGCTKEACAFRDNLPNF
CCCCCCCCCCCCCCCHHHCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCC
NNLDAEILGVSVDSVEKHKKFAEKYTLPFRLLVDDEKKIVQDYGVWGLKKFMGKEYMGIN
CCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCHHHHHHHCCCCCCCC
RVTYLINEEGVIEKVWPKVSPAGHAEEILNYLQQKT
EEEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SLLQEGSVAPPITTIDQHGKNVTLHEYKGKKVVLYFYPKDDTPGCTKEACAFRDNLPNF
CCCCCCCCCCCCCCHHHCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCC
NNLDAEILGVSVDSVEKHKKFAEKYTLPFRLLVDDEKKIVQDYGVWGLKKFMGKEYMGIN
CCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCHHHHHHHCCCCCCCC
RVTYLINEEGVIEKVWPKVSPAGHAEEILNYLQQKT
EEEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]