| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is ald [H]
Identifier: 119356703
GI number: 119356703
Start: 996912
End: 998132
Strand: Reverse
Name: ald [H]
Synonym: Cpha266_0875
Alternate gene names: 119356703
Gene position: 998132-996912 (Counterclockwise)
Preceding gene: 119356704
Following gene: 119356700
Centisome position: 31.85
GC content: 48.81
Gene sequence:
>1221_bases ATGGGATACAGTGGTGATACAGAAAGTATTGAGTTTGAGCTTGGAGTAAAAACCCTTGAGCGCTGGCTGATCAAGCCTGG AAAAACGATGAACATCGTTCTCGGTATTCCAAAAGAACGCGCTCAGGACGAACGACGGGTCGCCATCTCTCCTGCCGGCG TGCAGATTCTGACCGAACATGGAATCAGGGTGGTTATTGAACAGTCGGCCGGACATTTCTGTAATTTTTCCGATATCGAT TATTCTGAAGCAGGTGCGGTTATTGTTGCTTCACCTGAAGAACTTTTTGCCGATTCCAACGTCATTGTCAAGGTTTCTCC GCCTCAGCCGGAAGAACTGCCCCTGTTCACTCCCGGCCAGATGCTGATTTCAGCGCTGCATCTTGGAACAGTAAGCCGCC ACGTCATCGAAACGCTGCTGGAAAAAAACATCACCGCTCTTGGTTTTGAATTTATCGAGACCAAAGATGGCGAACTGCCG ATTGTCAGAACGCTGAGTGAAATAGCAGGCTCTCTTGCTATTCAAACCGCTGCAAAATATCTTGAAACCGGCTATGGAGG CAGCGGAATTCTTCTTGGCGGCATTGCCGGGGTGCCTCCTGCACACGTCACAATCGTAGGCGCCGGCACAGTAGGCCTTT TTGCGGCTCAGGATGCGCTCGGACTTGGAGCCCAGGTAACAGTTATCGACAAGGAGATCAACCGACTGAGAAGATTTGAA GCTTTTTTCAACCGGCATCTGGTCACCGCAATAGCCAATGATCACTACATAGCCGAAATTGCCCGATTTTCGGATGTCAT GATCGGTGCGTTGAGCCCGAAACAAAAAATAATAAAACCGCTCGTAAGCGAACAGGTCGTCAAATCCATGAAACCGGGTT CCGTCATTATTGACGTTTCTATCGACCAGGGCGCATGTTTCTCAACAAGCCGGCACACCTCCCACACCAATCCTATTTAT GTCAAGCACGGAGTAACACATTATTGCGTCCCTAACATACCCTCAGCCGTTGCAAAAACCGCTTCATTTGCTCTCACCAA CACCCTGCTGCCGTTTCTCCTGAAACTATCGGAGCATGAAACCATTTCCGATATTCTCTGGAAAAGCCACAGCCTGAGAA AAGGCACCTATATATTCAAGGGATATGTAACCCGGAAAATTCTTGCGGAGCTTCTCGATTTTCCTTTCCGCGAAATTGAC ATGTTGCTTGCTGCGAGTTGA
Upstream 100 bases:
>100_bases TAAAAATTACAGCAAAATAAGTGCAACTGCCCCCTGACGTGAAGGTTCCTCCCACCTTTCCTTGCGACAGAAGGCGAAAC CATTTTACCCGATTTGCTTG
Downstream 100 bases:
>100_bases GTTCCCGTTCAGGGTATGGCATCAGAGATATGCAAGCGGCTTACCCATCTGTCGGGCAATATAGGAGGCACATGAAACGC CTGAATAGGTCACAGCAATA
Product: L-alanine dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MGYSGDTESIEFELGVKTLERWLIKPGKTMNIVLGIPKERAQDERRVAISPAGVQILTEHGIRVVIEQSAGHFCNFSDID YSEAGAVIVASPEELFADSNVIVKVSPPQPEELPLFTPGQMLISALHLGTVSRHVIETLLEKNITALGFEFIETKDGELP IVRTLSEIAGSLAIQTAAKYLETGYGGSGILLGGIAGVPPAHVTIVGAGTVGLFAAQDALGLGAQVTVIDKEINRLRRFE AFFNRHLVTAIANDHYIAEIARFSDVMIGALSPKQKIIKPLVSEQVVKSMKPGSVIIDVSIDQGACFSTSRHTSHTNPIY VKHGVTHYCVPNIPSAVAKTASFALTNTLLPFLLKLSEHETISDILWKSHSLRKGTYIFKGYVTRKILAELLDFPFREID MLLAAS
Sequences:
>Translated_406_residues MGYSGDTESIEFELGVKTLERWLIKPGKTMNIVLGIPKERAQDERRVAISPAGVQILTEHGIRVVIEQSAGHFCNFSDID YSEAGAVIVASPEELFADSNVIVKVSPPQPEELPLFTPGQMLISALHLGTVSRHVIETLLEKNITALGFEFIETKDGELP IVRTLSEIAGSLAIQTAAKYLETGYGGSGILLGGIAGVPPAHVTIVGAGTVGLFAAQDALGLGAQVTVIDKEINRLRRFE AFFNRHLVTAIANDHYIAEIARFSDVMIGALSPKQKIIKPLVSEQVVKSMKPGSVIIDVSIDQGACFSTSRHTSHTNPIY VKHGVTHYCVPNIPSAVAKTASFALTNTLLPFLLKLSEHETISDILWKSHSLRKGTYIFKGYVTRKILAELLDFPFREID MLLAAS >Mature_405_residues GYSGDTESIEFELGVKTLERWLIKPGKTMNIVLGIPKERAQDERRVAISPAGVQILTEHGIRVVIEQSAGHFCNFSDIDY SEAGAVIVASPEELFADSNVIVKVSPPQPEELPLFTPGQMLISALHLGTVSRHVIETLLEKNITALGFEFIETKDGELPI VRTLSEIAGSLAIQTAAKYLETGYGGSGILLGGIAGVPPAHVTIVGAGTVGLFAAQDALGLGAQVTVIDKEINRLRRFEA FFNRHLVTAIANDHYIAEIARFSDVMIGALSPKQKIIKPLVSEQVVKSMKPGSVIIDVSIDQGACFSTSRHTSHTNPIYV KHGVTHYCVPNIPSAVAKTASFALTNTLLPFLLKLSEHETISDILWKSHSLRKGTYIFKGYVTRKILAELLDFPFREIDM LLAAS
Specific function: This enzyme is a key factor in the assimilation of L- alanine as an energy source through the tricarboxylic acid cycle during sporulation [H]
COG id: COG0686
COG function: function code E; Alanine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=371, Percent_Identity=29.3800539083558, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI122939153, Length=371, Percent_Identity=29.3800539083558, Blast_Score=121, Evalue=1e-27, Organism=Escherichia coli, GI1787887, Length=355, Percent_Identity=28.7323943661972, Blast_Score=105, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17550456, Length=350, Percent_Identity=29.7142857142857, Blast_Score=140, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR008141 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.4.1.1 [H]
Molecular weight: Translated: 44080; Mature: 43948
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYSGDTESIEFELGVKTLERWLIKPGKTMNIVLGIPKERAQDERRVAISPAGVQILTEH CCCCCCCCCEEEEECHHHHHHHHCCCCCEEEEEEECCHHHCCCCCEEEECCCCEEEEECC GIRVVIEQSAGHFCNFSDIDYSEAGAVIVASPEELFADSNVIVKVSPPQPEELPLFTPGQ CEEEEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCEEEEECCCCCCCCCCCCCHH MLISALHLGTVSRHVIETLLEKNITALGFEFIETKDGELPIVRTLSEIAGSLAIQTAAKY HHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH LETGYGGSGILLGGIAGVPPAHVTIVGAGTVGLFAAQDALGLGAQVTVIDKEINRLRRFE HHCCCCCCCEEECCCCCCCCCEEEEEECCCHHHEEHHHHHCCCCEEEEEHHHHHHHHHHH AFFNRHLVTAIANDHYIAEIARFSDVMIGALSPKQKIIKPLVSEQVVKSMKPGSVIIDVS HHHCCCEEEEECCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE IDQGACFSTSRHTSHTNPIYVKHGVTHYCVPNIPSAVAKTASFALTNTLLPFLLKLSEHE ECCCCCCCCCCCCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TISDILWKSHSLRKGTYIFKGYVTRKILAELLDFPFREIDMLLAAS HHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHCCC >Mature Secondary Structure GYSGDTESIEFELGVKTLERWLIKPGKTMNIVLGIPKERAQDERRVAISPAGVQILTEH CCCCCCCCEEEEECHHHHHHHHCCCCCEEEEEEECCHHHCCCCCEEEECCCCEEEEECC GIRVVIEQSAGHFCNFSDIDYSEAGAVIVASPEELFADSNVIVKVSPPQPEELPLFTPGQ CEEEEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCEEEEECCCCCCCCCCCCCHH MLISALHLGTVSRHVIETLLEKNITALGFEFIETKDGELPIVRTLSEIAGSLAIQTAAKY HHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH LETGYGGSGILLGGIAGVPPAHVTIVGAGTVGLFAAQDALGLGAQVTVIDKEINRLRRFE HHCCCCCCCEEECCCCCCCCCEEEEEECCCHHHEEHHHHHCCCCEEEEEHHHHHHHHHHH AFFNRHLVTAIANDHYIAEIARFSDVMIGALSPKQKIIKPLVSEQVVKSMKPGSVIIDVS HHHCCCEEEEECCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE IDQGACFSTSRHTSHTNPIYVKHGVTHYCVPNIPSAVAKTASFALTNTLLPFLLKLSEHE ECCCCCCCCCCCCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TISDILWKSHSLRKGTYIFKGYVTRKILAELLDFPFREIDMLLAAS HHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2340274 [H]