| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356676
Identifier: 119356676
GI number: 119356676
Start: 966966
End: 967976
Strand: Reverse
Name: 119356676
Synonym: Cpha266_0845
Alternate gene names: NA
Gene position: 967976-966966 (Counterclockwise)
Preceding gene: 119356677
Following gene: 119356675
Centisome position: 30.89
GC content: 51.93
Gene sequence:
>1011_bases ATGACGATCAACTATTTCACCGAAACGCACCCGGCCTACCGTGACAAACTCACCATTCTGGTGATGGCACAGGTTCGAAA AGAGTTCGGCGCTGAAGTTGAACCATTTCTCCTCCATAAACCGATTCCGGAACTCCTTGCAGGATCATGGATGGCATGCA GGGAAACACTGATTTCAGGCATCGCAAACCGCGAGGCAAAAGAGGTTGTTGCCGCCGTCACCTCTATGATGAACCGATGT CCTTACTGTGTCGATGCACACACCGTCATGGCGCTCGGCGCATCGGGACGCGATTATACCGGAACCATTGCGTCCGGCAG GTATGAAACCATCCGTGACCCCTTTATGCGCAGCATGGCAGAGTGGGGATCGGCAACCCGTTCACCCGATTCTCCGGTTC TTCGATACCCGCCGTTTAATCCCGATGAAGCCCCGGAATATATTGGAACGGTACTCTTTTTCAACTATATCAATCGCATG GCAACCATCCTCCTTGGAGCTTCACCGCTCCCTTTCACTGATGGAATCATGAAAAACATCTCAATGCGACTTGCTGCTTT TTTTTTCAGTTCAGCAATTCACCGCACCAAACAACCGGGAACATCTCTTGACCTTCTGCCAAACGAGCCGTTGCCGGATG ATCTTGCATGGGCAAAACCATCTCCCTTTGTTTCCGGTGCTTTGGCAAGATTCTCGGCAGCCATCGAAAAAGCAGCAGAA ACAGTACTTACCGAAAAAACAGCGGGCATGGTCATTGATCAGCTTGACAGGTGGGATGGCAGTGATCCCGGCATCAGCAG CAGTTGGTGCGAACATCTCCTTTTCCGCCTCAATGATTCGGAAAAAACCGTTGCCCGCCTCGCCCTTCTTACAGCAATCG CTCCCTGGCAGATCAGCAACGAGATGGTCAGGGCATTTTCAGCATACCATTCCGGCGACAAGGCGCTACTCTCTATCCTC TCCTGGAGCAGCCTTTCGGCAGCAAGAAGAATCAGCCGATGGCTCGCATAA
Upstream 100 bases:
>100_bases CAGCATGAACTATCACCTCTTCAACGTCAGGACAGCCATTCAAAAAAAAGCAGCAGCCGAGGCATAGAGCCCGGCTGTTG ATCGAAGAAAGCCTGTTTTC
Downstream 100 bases:
>100_bases CACATTCCTCTGGTTTTAACGACAATTCCTGTTGCAGGTTACCGTAAAAAATGCCATCATCATGAATACCGGCAATTGAT ATAACCGGGATATGGCCGAA
Product: alkylhydroperoxidase
Products: NA
Alternate protein names: Alkylhydroperoxidase Like Protein AhpD Family; Carboxymuconolactone Decarboxylase Family Protein; Carboxymuconolactone Decarboxylase
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTINYFTETHPAYRDKLTILVMAQVRKEFGAEVEPFLLHKPIPELLAGSWMACRETLISGIANREAKEVVAAVTSMMNRC PYCVDAHTVMALGASGRDYTGTIASGRYETIRDPFMRSMAEWGSATRSPDSPVLRYPPFNPDEAPEYIGTVLFFNYINRM ATILLGASPLPFTDGIMKNISMRLAAFFFSSAIHRTKQPGTSLDLLPNEPLPDDLAWAKPSPFVSGALARFSAAIEKAAE TVLTEKTAGMVIDQLDRWDGSDPGISSSWCEHLLFRLNDSEKTVARLALLTAIAPWQISNEMVRAFSAYHSGDKALLSIL SWSSLSAARRISRWLA
Sequences:
>Translated_336_residues MTINYFTETHPAYRDKLTILVMAQVRKEFGAEVEPFLLHKPIPELLAGSWMACRETLISGIANREAKEVVAAVTSMMNRC PYCVDAHTVMALGASGRDYTGTIASGRYETIRDPFMRSMAEWGSATRSPDSPVLRYPPFNPDEAPEYIGTVLFFNYINRM ATILLGASPLPFTDGIMKNISMRLAAFFFSSAIHRTKQPGTSLDLLPNEPLPDDLAWAKPSPFVSGALARFSAAIEKAAE TVLTEKTAGMVIDQLDRWDGSDPGISSSWCEHLLFRLNDSEKTVARLALLTAIAPWQISNEMVRAFSAYHSGDKALLSIL SWSSLSAARRISRWLA >Mature_335_residues TINYFTETHPAYRDKLTILVMAQVRKEFGAEVEPFLLHKPIPELLAGSWMACRETLISGIANREAKEVVAAVTSMMNRCP YCVDAHTVMALGASGRDYTGTIASGRYETIRDPFMRSMAEWGSATRSPDSPVLRYPPFNPDEAPEYIGTVLFFNYINRMA TILLGASPLPFTDGIMKNISMRLAAFFFSSAIHRTKQPGTSLDLLPNEPLPDDLAWAKPSPFVSGALARFSAAIEKAAET VLTEKTAGMVIDQLDRWDGSDPGISSSWCEHLLFRLNDSEKTVARLALLTAIAPWQISNEMVRAFSAYHSGDKALLSILS WSSLSAARRISRWLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37176; Mature: 37045
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINYFTETHPAYRDKLTILVMAQVRKEFGAEVEPFLLHKPIPELLAGSWMACRETLISG CEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHCCCHHHHHHHHHHH IANREAKEVVAAVTSMMNRCPYCVDAHTVMALGASGRDYTGTIASGRYETIRDPFMRSMA HHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH EWGSATRSPDSPVLRYPPFNPDEAPEYIGTVLFFNYINRMATILLGASPLPFTDGIMKNI HHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH SMRLAAFFFSSAIHRTKQPGTSLDLLPNEPLPDDLAWAKPSPFVSGALARFSAAIEKAAE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH TVLTEKTAGMVIDQLDRWDGSDPGISSSWCEHLLFRLNDSEKTVARLALLTAIAPWQISN HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH EMVRAFSAYHSGDKALLSILSWSSLSAARRISRWLA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TINYFTETHPAYRDKLTILVMAQVRKEFGAEVEPFLLHKPIPELLAGSWMACRETLISG EECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHCCCHHHHHHHHHHH IANREAKEVVAAVTSMMNRCPYCVDAHTVMALGASGRDYTGTIASGRYETIRDPFMRSMA HHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH EWGSATRSPDSPVLRYPPFNPDEAPEYIGTVLFFNYINRMATILLGASPLPFTDGIMKNI HHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH SMRLAAFFFSSAIHRTKQPGTSLDLLPNEPLPDDLAWAKPSPFVSGALARFSAAIEKAAE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH TVLTEKTAGMVIDQLDRWDGSDPGISSSWCEHLLFRLNDSEKTVARLALLTAIAPWQISN HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH EMVRAFSAYHSGDKALLSILSWSSLSAARRISRWLA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA