| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356675
Identifier: 119356675
GI number: 119356675
Start: 966215
End: 966874
Strand: Reverse
Name: 119356675
Synonym: Cpha266_0844
Alternate gene names: NA
Gene position: 966874-966215 (Counterclockwise)
Preceding gene: 119356676
Following gene: 119356673
Centisome position: 30.85
GC content: 47.42
Gene sequence:
>660_bases ATGGCCGAAAGCACTCTGCGCAAGAGTATGAAAAACGCCATATTACGCAAGACCCCGAAAAAAAGAACCATGAAAGCCCT CTTCAAACTGATCTCATTATTTGTTCTTACCGCTTGTACGTCAGCAGGAATTTTTTTTATCAGTCTTGGCTATCTCGTCT CGCTTTACGCCGAAAAACCCAAACCGGCAGATGTGATTATCGTTCTGGGGGGGGATAACGGACTTCGGGTAAAAAAAGGA GCGGAACTATACAATGACGGCTATGCACCCCGAGTCATTCTCACCGGCATTGATGCGAGGTTTTACCGTCCATCGCATCC CGACTGGCGTGAACGGCGCATGAGAGCTCTCGGTGTTCCGAAAAAATCAATCAGGATTGACACCCGATCGGCAAGCTCAT GGGAAGAGGCCCTGAACAGTTCCAGGCTCATGGAAAAAAAAGGGTGGAAAACAGCCATTGTCGTCAGCGATCCGCCCCAC CTCTTCAGACTTCACAGAACGTGGAAAAAAGCCTTTTCCGGATCAGCAAAACAGTTCATCCTTGTGCCCACAAAACCACA ATGGTGGAACCCTTTGCTCTGGTGGAAAAACAAAAAAAGCTATTCTTTTGTGATCAGCGAATTCCAGAAAAGCCTCTACT ATTCCGTCATGTACTTCTGA
Upstream 100 bases:
>100_bases CTCGCATAACACATTCCTCTGGTTTTAACGACAATTCCTGTTGCAGGTTACCGTAAAAAATGCCATCATCATGAATACCG GCAATTGATATAACCGGGAT
Downstream 100 bases:
>100_bases AAACGGAAACCCGGGTGACCTCGCAGGTAATTTCCCGGATCACCCCTCCGTTTTCAGATGCCGAACCTCGCCCTTGCATC AGAAAGGGCACCGGACAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MAESTLRKSMKNAILRKTPKKRTMKALFKLISLFVLTACTSAGIFFISLGYLVSLYAEKPKPADVIIVLGGDNGLRVKKG AELYNDGYAPRVILTGIDARFYRPSHPDWRERRMRALGVPKKSIRIDTRSASSWEEALNSSRLMEKKGWKTAIVVSDPPH LFRLHRTWKKAFSGSAKQFILVPTKPQWWNPLLWWKNKKSYSFVISEFQKSLYYSVMYF
Sequences:
>Translated_219_residues MAESTLRKSMKNAILRKTPKKRTMKALFKLISLFVLTACTSAGIFFISLGYLVSLYAEKPKPADVIIVLGGDNGLRVKKG AELYNDGYAPRVILTGIDARFYRPSHPDWRERRMRALGVPKKSIRIDTRSASSWEEALNSSRLMEKKGWKTAIVVSDPPH LFRLHRTWKKAFSGSAKQFILVPTKPQWWNPLLWWKNKKSYSFVISEFQKSLYYSVMYF >Mature_218_residues AESTLRKSMKNAILRKTPKKRTMKALFKLISLFVLTACTSAGIFFISLGYLVSLYAEKPKPADVIIVLGGDNGLRVKKGA ELYNDGYAPRVILTGIDARFYRPSHPDWRERRMRALGVPKKSIRIDTRSASSWEEALNSSRLMEKKGWKTAIVVSDPPHL FRLHRTWKKAFSGSAKQFILVPTKPQWWNPLLWWKNKKSYSFVISEFQKSLYYSVMYF
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25300; Mature: 25169
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESTLRKSMKNAILRKTPKKRTMKALFKLISLFVLTACTSAGIFFISLGYLVSLYAEKP CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC KPADVIIVLGGDNGLRVKKGAELYNDGYAPRVILTGIDARFYRPSHPDWRERRMRALGVP CCCEEEEEEECCCCEEECCCCHHHCCCCCCEEEEEECCCEEECCCCCCHHHHHHHHHCCC KKSIRIDTRSASSWEEALNSSRLMEKKGWKTAIVVSDPPHLFRLHRTWKKAFSGSAKQFI CHHEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEE LVPTKPQWWNPLLWWKNKKSYSFVISEFQKSLYYSVMYF EEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AESTLRKSMKNAILRKTPKKRTMKALFKLISLFVLTACTSAGIFFISLGYLVSLYAEKP CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC KPADVIIVLGGDNGLRVKKGAELYNDGYAPRVILTGIDARFYRPSHPDWRERRMRALGVP CCCEEEEEEECCCCEEECCCCHHHCCCCCCEEEEEECCCEEECCCCCCHHHHHHHHHCCC KKSIRIDTRSASSWEEALNSSRLMEKKGWKTAIVVSDPPHLFRLHRTWKKAFSGSAKQFI CHHEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEE LVPTKPQWWNPLLWWKNKKSYSFVISEFQKSLYYSVMYF EEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA