| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is aroK
Identifier: 119356668
GI number: 119356668
Start: 950866
End: 951438
Strand: Reverse
Name: aroK
Synonym: Cpha266_0837
Alternate gene names: 119356668
Gene position: 951438-950866 (Counterclockwise)
Preceding gene: 119356669
Following gene: 119356667
Centisome position: 30.36
GC content: 45.38
Gene sequence:
>573_bases ATGAAACATCACTCTCTCATCTTTTTAACCGGATTCAGCGGATCTGGCAAATCCACCATTGGTCCGCTACTGGCGAACTC TCTTGGTTACGACTTTATTGATCTCGATCAGGCCATTGAAGCAATTACCGGTAAGTCGGTATCGAGAATTTTTGCCGAAG AGGGCGAATCATACTTCAGAAAACTTGAACTTGACACACTGAAAACAGTGACCAACAGAGAAGAGCTTATCGTCTCGCTT GGAGGCGGAGCGCTTGAAAGCAATGAGTGCTATACGTTAATCAAGGAAAAGGGCACACTGGTTTATCTGAAATCAGGTTC AGGAACCCTGACAAAAAGGCTCTGCCATAAAACCGACCGACCGCTCCTGAAGAGTGAACAGGGTGGCAAGCTCTCAAACG GAGAGATTGAACAGAAAATAAGAGAACTCCTTGCCCGTCGGGAACCAAGGTACAACAGCGCAACAATTACCGTTCAAACC GATACCGGAAGAATAGGTTCAACGGTCGAAGAACTTACCCGAAAAATAAACCGGTATGTAAGAAAAACAACCGGAAATTC AAGGGCGAAATAA
Upstream 100 bases:
>100_bases TCTTTGATTGAGCTTTTTTACTATATTTGGCGCAGAGCTTATAGCGAATAATTTTTTGTAACCGTAACGTTCCCGGTCAT TTTTCAGGGCATCATGGGCC
Downstream 100 bases:
>100_bases ACCCAAAGCAACGTTATTCGTGAACACCATCATAGTCAAGACACCGGTCACCCGACATCTCGGAGAGCTCTTCAGCAAAA ACGGTCTTTCAAAAAAAACC
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKHHSLIFLTGFSGSGKSTIGPLLANSLGYDFIDLDQAIEAITGKSVSRIFAEEGESYFRKLELDTLKTVTNREELIVSL GGGALESNECYTLIKEKGTLVYLKSGSGTLTKRLCHKTDRPLLKSEQGGKLSNGEIEQKIRELLARREPRYNSATITVQT DTGRIGSTVEELTRKINRYVRKTTGNSRAK
Sequences:
>Translated_190_residues MKHHSLIFLTGFSGSGKSTIGPLLANSLGYDFIDLDQAIEAITGKSVSRIFAEEGESYFRKLELDTLKTVTNREELIVSL GGGALESNECYTLIKEKGTLVYLKSGSGTLTKRLCHKTDRPLLKSEQGGKLSNGEIEQKIRELLARREPRYNSATITVQT DTGRIGSTVEELTRKINRYVRKTTGNSRAK >Mature_190_residues MKHHSLIFLTGFSGSGKSTIGPLLANSLGYDFIDLDQAIEAITGKSVSRIFAEEGESYFRKLELDTLKTVTNREELIVSL GGGALESNECYTLIKEKGTLVYLKSGSGTLTKRLCHKTDRPLLKSEQGGKLSNGEIEQKIRELLARREPRYNSATITVQT DTGRIGSTVEELTRKINRYVRKTTGNSRAK
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=163, Percent_Identity=34.9693251533742, Blast_Score=85, Evalue=2e-18, Organism=Escherichia coli, GI1786587, Length=145, Percent_Identity=30.3448275862069, Blast_Score=64, Evalue=8e-12,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_CHLPD (A1BER1)
Other databases:
- EMBL: CP000492 - RefSeq: YP_911312.1 - ProteinModelPortal: A1BER1 - SMR: A1BER1 - STRING: A1BER1 - GeneID: 4570374 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_0837 - NMPDR: fig|290317.7.peg.890 - eggNOG: COG0703 - HOGENOM: HBG335815 - OMA: MIISERV - ProtClustDB: PRK00131 - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 21029; Mature: 21029
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: BINDING 36-36 BINDING 60-60 BINDING 82-82 BINDING 120-120 BINDING 147-147
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHHSLIFLTGFSGSGKSTIGPLLANSLGYDFIDLDQAIEAITGKSVSRIFAEEGESYFR CCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHH KLELDTLKTVTNREELIVSLGGGALESNECYTLIKEKGTLVYLKSGSGTLTKRLCHKTDR HHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHCCC PLLKSEQGGKLSNGEIEQKIRELLARREPRYNSATITVQTDTGRIGSTVEELTRKINRYV CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH RKTTGNSRAK HHCCCCCCCC >Mature Secondary Structure MKHHSLIFLTGFSGSGKSTIGPLLANSLGYDFIDLDQAIEAITGKSVSRIFAEEGESYFR CCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHH KLELDTLKTVTNREELIVSLGGGALESNECYTLIKEKGTLVYLKSGSGTLTKRLCHKTDR HHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHCCC PLLKSEQGGKLSNGEIEQKIRELLARREPRYNSATITVQTDTGRIGSTVEELTRKINRYV CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH RKTTGNSRAK HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA