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The map label for this gene is yrrC [H]

Identifier: 119356669

GI number: 119356669

Start: 951556

End: 953751

Strand: Reverse

Name: yrrC [H]

Synonym: Cpha266_0838

Alternate gene names: 119356669

Gene position: 953751-951556 (Counterclockwise)

Preceding gene: 119356671

Following gene: 119356668

Centisome position: 30.43

GC content: 51.91

Gene sequence:

>2196_bases
ATGCCAGAAAAAACGACTCCCGCGCCAAAGCATGAAAGGATTTCCGGCTCTGTCGAGCGGGTAACCTTTTACAGCGAGGA
GTCCGGATTCAGCGTTCTGAAGGTTCGGGTGAAAGGCAACCGCGACCTCGTATCGGTGGTGGGAACTTCACCGGCAATCT
CTCCCGGTGAGTTTGTAGAGTGCCAGGGCATATGGCATAACGACCGGGTACACGGGCTCCAGTTCAAGGCTGAGCACATC
ACGGTTATTCCGCCAACAACCGCTTCAGGAATCGAGAAATATCTTGCATCGGGGATGGTGCGCGGTATTGGCGCTTTTTA
TGCAAAAACGCTTGTCAGGGAGTTCGGCGCAAGAGTACTCGATGTTATTGAAAACACCCCGGAAAAGTTACTCGACATTC
CCGGCATCGGAAAAAAACGCCTCGACATTATCACAAAATCGTGGGCCGAACAAAAAGCCATTCGCGACATCATGGTTTTT
CTGCAGTCGCACGGCGTTGGCGTAGCAAGAGCCTTCCGGATATACAAGACATACAGGGAAGATGCCATCCGCCTCGTAAC
GGAAAATCCCTACCGCCTTTCGCTCGATATCGAGGGAGTCGGGTTTCTCACCGCCGACACCATAGCCGATAAACTCGGCA
TCTCTCAGGACTCTCTGATCAGGGCTGAAGCGGGCGTACGCCACATGTTGCAGGAACTTGCCACCGAAGGGCACTGTGCC
GTACCGGCAGAACGACTTATTGCCGAATCGGCAGCCATGCTTGCTGTTGAAGTCGATATTGTCACCGAGGCAGTAAAACA
GCAGACAGAAAAAAAACATCTTTTGTGTGAAGAGATCGACGGCCGACAGTGCCTCTACATTGCTCCGCTCTACCGCGCCG
AACGGGGAGTTGCCTCAGGGCTTCACCGCCTGATGGAGGGCCCCCTTCCATGGAAAGAGGTCAATCCCGATCAGAGCATT
GGTTCGGTTGAGCAAAAAACAGGCCTGCTGCTCTCCCCTTCCCAGAAAGAGGCGGTGGCTCTGGTACTGAAAAGCAAGGT
TTCCGTCATAACCGGCGGGCCCGGTGTGGGAAAAACAACGCTGGTCAACGTTATTCTTTCCATTATCAGCTCCCTGAATG
TGAAGGTCTCGCTTTGCGCTCCAACCGGACGCGCAGCAAAACGCCTGTCGGAATCAACCGGACTTGAGGCAAAGACGATC
CACCGGCTGCTTGAATTTGATCCGATACTGTTCAACTTCAAACGTGGCGAAGGCAACAAGCTCGATACAAACCTTGTTGT
CGTGGATGAAACATCGATGGTTGACGTGATTCTCATGAACAAACTGCTTCTGGCCATTCCCGACAAAGCGGCACTGCTTC
TGGTCGGGGATGTCGATCAATTGCCCTCTGTCGGACCCGGCGCGGTGCTTTCGGATATCATCACTTCAGGAGTTATACCA
ACAGTACGATTGACAGAAATCTTCCGGCAGGCTGCGGAATCGAGCATTATTATCAATGCGCACCAGATCAACCAGGGAAA
AATACCGACGAATGCTGATGGCGATGCGCTGACCGACTTCTACTTCATTGCATCGACAACGCCAGAGGATATTCATAGAA
AACTGCTCACCATGGTCACAGAACGCATTCCTAAACGATTCGGCTTTCACCCTGTAAGAGACATTCAGGTACTGACGCCG
ATGAACCGGGGCGGACTTGGATCACGCTCGCTCAATATCGAACTGCAACAGGCGCTCAACAAGGAGTCGATGCCGCAGAT
TAACCGGTTCGGAACGACATTCTCGCCCGGCGACAAGGTTATCCAGATGGTAAACAACTATGACAAGGAGATTTTTAATG
GCGATATCGGTCTTGTCGTATCAATAAATACCGATGAAGGAGTCCTCTCTGTTGAATACGACCGTCGGGTGATTACCTAT
GAGTTTTCGGAACTCGATGAAATAGCTCTTGCCTACGCCACCAGCATCCACAAAAGTCAGGGATCAGAATACCCGGCTGT
CGTCATACCGCTTGCCATGCAGCACTTCACGCTGCTTGAAAGAAATCTGCTCTACACAGCGGTAACACGAGGCAAAAAAC
TCGTTGTCATCATCGGTCAGCCTAAAGCACTTGCAACTGCTGTAGGGAACCATAGAGCGAACCAGCGCCTGACCAACCTT
TCGAGAAGGCTTGCTGAATGCACAGAAACCCCATGA

Upstream 100 bases:

>100_bases
TGCAGAAAGAATATTTTGTTACCATGATATAGTTTTAAAAGCAGCGACCTCCTATAAAACAGCCGCTGCAGAGAGCGTCC
ATACATACGACCAAACAGCA

Downstream 100 bases:

>100_bases
AAAACCAGCCGGAAATCTCTTTGATTGAGCTTTTTTACTATATTTGGCGCAGAGCTTATAGCGAATAATTTTTTGTAACC
GTAACGTTCCCGGTCATTTT

Product: RecD/TraA family helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 731; Mature: 730

Protein sequence:

>731_residues
MPEKTTPAPKHERISGSVERVTFYSEESGFSVLKVRVKGNRDLVSVVGTSPAISPGEFVECQGIWHNDRVHGLQFKAEHI
TVIPPTTASGIEKYLASGMVRGIGAFYAKTLVREFGARVLDVIENTPEKLLDIPGIGKKRLDIITKSWAEQKAIRDIMVF
LQSHGVGVARAFRIYKTYREDAIRLVTENPYRLSLDIEGVGFLTADTIADKLGISQDSLIRAEAGVRHMLQELATEGHCA
VPAERLIAESAAMLAVEVDIVTEAVKQQTEKKHLLCEEIDGRQCLYIAPLYRAERGVASGLHRLMEGPLPWKEVNPDQSI
GSVEQKTGLLLSPSQKEAVALVLKSKVSVITGGPGVGKTTLVNVILSIISSLNVKVSLCAPTGRAAKRLSESTGLEAKTI
HRLLEFDPILFNFKRGEGNKLDTNLVVVDETSMVDVILMNKLLLAIPDKAALLLVGDVDQLPSVGPGAVLSDIITSGVIP
TVRLTEIFRQAAESSIIINAHQINQGKIPTNADGDALTDFYFIASTTPEDIHRKLLTMVTERIPKRFGFHPVRDIQVLTP
MNRGGLGSRSLNIELQQALNKESMPQINRFGTTFSPGDKVIQMVNNYDKEIFNGDIGLVVSINTDEGVLSVEYDRRVITY
EFSELDEIALAYATSIHKSQGSEYPAVVIPLAMQHFTLLERNLLYTAVTRGKKLVVIIGQPKALATAVGNHRANQRLTNL
SRRLAECTETP

Sequences:

>Translated_731_residues
MPEKTTPAPKHERISGSVERVTFYSEESGFSVLKVRVKGNRDLVSVVGTSPAISPGEFVECQGIWHNDRVHGLQFKAEHI
TVIPPTTASGIEKYLASGMVRGIGAFYAKTLVREFGARVLDVIENTPEKLLDIPGIGKKRLDIITKSWAEQKAIRDIMVF
LQSHGVGVARAFRIYKTYREDAIRLVTENPYRLSLDIEGVGFLTADTIADKLGISQDSLIRAEAGVRHMLQELATEGHCA
VPAERLIAESAAMLAVEVDIVTEAVKQQTEKKHLLCEEIDGRQCLYIAPLYRAERGVASGLHRLMEGPLPWKEVNPDQSI
GSVEQKTGLLLSPSQKEAVALVLKSKVSVITGGPGVGKTTLVNVILSIISSLNVKVSLCAPTGRAAKRLSESTGLEAKTI
HRLLEFDPILFNFKRGEGNKLDTNLVVVDETSMVDVILMNKLLLAIPDKAALLLVGDVDQLPSVGPGAVLSDIITSGVIP
TVRLTEIFRQAAESSIIINAHQINQGKIPTNADGDALTDFYFIASTTPEDIHRKLLTMVTERIPKRFGFHPVRDIQVLTP
MNRGGLGSRSLNIELQQALNKESMPQINRFGTTFSPGDKVIQMVNNYDKEIFNGDIGLVVSINTDEGVLSVEYDRRVITY
EFSELDEIALAYATSIHKSQGSEYPAVVIPLAMQHFTLLERNLLYTAVTRGKKLVVIIGQPKALATAVGNHRANQRLTNL
SRRLAECTETP
>Mature_730_residues
PEKTTPAPKHERISGSVERVTFYSEESGFSVLKVRVKGNRDLVSVVGTSPAISPGEFVECQGIWHNDRVHGLQFKAEHIT
VIPPTTASGIEKYLASGMVRGIGAFYAKTLVREFGARVLDVIENTPEKLLDIPGIGKKRLDIITKSWAEQKAIRDIMVFL
QSHGVGVARAFRIYKTYREDAIRLVTENPYRLSLDIEGVGFLTADTIADKLGISQDSLIRAEAGVRHMLQELATEGHCAV
PAERLIAESAAMLAVEVDIVTEAVKQQTEKKHLLCEEIDGRQCLYIAPLYRAERGVASGLHRLMEGPLPWKEVNPDQSIG
SVEQKTGLLLSPSQKEAVALVLKSKVSVITGGPGVGKTTLVNVILSIISSLNVKVSLCAPTGRAAKRLSESTGLEAKTIH
RLLEFDPILFNFKRGEGNKLDTNLVVVDETSMVDVILMNKLLLAIPDKAALLLVGDVDQLPSVGPGAVLSDIITSGVIPT
VRLTEIFRQAAESSIIINAHQINQGKIPTNADGDALTDFYFIASTTPEDIHRKLLTMVTERIPKRFGFHPVRDIQVLTPM
NRGGLGSRSLNIELQQALNKESMPQINRFGTTFSPGDKVIQMVNNYDKEIFNGDIGLVVSINTDEGVLSVEYDRRVITYE
FSELDEIALAYATSIHKSQGSEYPAVVIPLAMQHFTLLERNLLYTAVTRGKKLVVIIGQPKALATAVGNHRANQRLTNLS
RRLAECTETP

Specific function: Exhibits Several Catalytic Activities, Including ATP-Dependent Exonuclease, ATP-Stimulated Endonuclease, ATP-Dependent Unwinding And DNA-Dependent ATPase Activities. Strand Cleavage Occurs 5' To 3' During The Unwinding Of Duplex DNA At Chi Sequences, Whi

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789182, Length=565, Percent_Identity=27.6106194690265, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006345 [H]

Pfam domain/function: NA

EC number: 3.1.11.5

Molecular weight: Translated: 80110; Mature: 79978

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEKTTPAPKHERISGSVERVTFYSEESGFSVLKVRVKGNRDLVSVVGTSPAISPGEFVE
CCCCCCCCCCCHHCCCCEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEE
CQGIWHNDRVHGLQFKAEHITVIPPTTASGIEKYLASGMVRGIGAFYAKTLVREFGARVL
EECCCCCCCEECEEEEECEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVIENTPEKLLDIPGIGKKRLDIITKSWAEQKAIRDIMVFLQSHGVGVARAFRIYKTYRE
HHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
DAIRLVTENPYRLSLDIEGVGFLTADTIADKLGISQDSLIRAEAGVRHMLQELATEGHCA
HHEEEEECCCEEEEEEECCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
VPAERLIAESAAMLAVEVDIVTEAVKQQTEKKHLLCEEIDGRQCLYIAPLYRAERGVASG
CCHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHH
LHRLMEGPLPWKEVNPDQSIGSVEQKTGLLLSPSQKEAVALVLKSKVSVITGGPGVGKTT
HHHHHCCCCCCCCCCCCCCCCCHHHHCCCEECCCCHHHHHHHHHCCEEEEECCCCCCHHH
LVNVILSIISSLNVKVSLCAPTGRAAKRLSESTGLEAKTIHRLLEFDPILFNFKRGEGNK
HHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCE
LDTNLVVVDETSMVDVILMNKLLLAIPDKAALLLVGDVDQLPSVGPGAVLSDIITSGVIP
ECCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECHHHCCCCCCHHHHHHHHHCCCCC
TVRLTEIFRQAAESSIIINAHQINQGKIPTNADGDALTDFYFIASTTPEDIHRKLLTMVT
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH
ERIPKRFGFHPVRDIQVLTPMNRGGLGSRSLNIELQQALNKESMPQINRFGTTFSPGDKV
HHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEHHHHHCCCCCCCHHHHCCCCCCCHHHH
IQMVNNYDKEIFNGDIGLVVSINTDEGVLSVEYDRRVITYEFSELDEIALAYATSIHKSQ
HHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHCC
GSEYPAVVIPLAMQHFTLLERNLLYTAVTRGKKLVVIIGQPKALATAVGNHRANQRLTNL
CCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCHHHHHHHHHH
SRRLAECTETP
HHHHHHHCCCC
>Mature Secondary Structure 
PEKTTPAPKHERISGSVERVTFYSEESGFSVLKVRVKGNRDLVSVVGTSPAISPGEFVE
CCCCCCCCCCHHCCCCEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEE
CQGIWHNDRVHGLQFKAEHITVIPPTTASGIEKYLASGMVRGIGAFYAKTLVREFGARVL
EECCCCCCCEECEEEEECEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVIENTPEKLLDIPGIGKKRLDIITKSWAEQKAIRDIMVFLQSHGVGVARAFRIYKTYRE
HHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
DAIRLVTENPYRLSLDIEGVGFLTADTIADKLGISQDSLIRAEAGVRHMLQELATEGHCA
HHEEEEECCCEEEEEEECCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
VPAERLIAESAAMLAVEVDIVTEAVKQQTEKKHLLCEEIDGRQCLYIAPLYRAERGVASG
CCHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHH
LHRLMEGPLPWKEVNPDQSIGSVEQKTGLLLSPSQKEAVALVLKSKVSVITGGPGVGKTT
HHHHHCCCCCCCCCCCCCCCCCHHHHCCCEECCCCHHHHHHHHHCCEEEEECCCCCCHHH
LVNVILSIISSLNVKVSLCAPTGRAAKRLSESTGLEAKTIHRLLEFDPILFNFKRGEGNK
HHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCE
LDTNLVVVDETSMVDVILMNKLLLAIPDKAALLLVGDVDQLPSVGPGAVLSDIITSGVIP
ECCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECHHHCCCCCCHHHHHHHHHCCCCC
TVRLTEIFRQAAESSIIINAHQINQGKIPTNADGDALTDFYFIASTTPEDIHRKLLTMVT
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH
ERIPKRFGFHPVRDIQVLTPMNRGGLGSRSLNIELQQALNKESMPQINRFGTTFSPGDKV
HHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEHHHHHCCCCCCCHHHHCCCCCCCHHHH
IQMVNNYDKEIFNGDIGLVVSINTDEGVLSVEYDRRVITYEFSELDEIALAYATSIHKSQ
HHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHCC
GSEYPAVVIPLAMQHFTLLERNLLYTAVTRGKKLVVIIGQPKALATAVGNHRANQRLTNL
CCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCHHHHHHHHHH
SRRLAECTETP
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: DNA-dependent ATPase activity; Phosphoric ester hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]