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The map label for this gene is asnC [C]

Identifier: 119356662

GI number: 119356662

Start: 944647

End: 945171

Strand: Direct

Name: asnC [C]

Synonym: Cpha266_0831

Alternate gene names: 119356662

Gene position: 944647-945171 (Clockwise)

Preceding gene: 119356656

Following gene: 119356663

Centisome position: 30.14

GC content: 44.0

Gene sequence:

>525_bases
ATGTCCGGACATCTTGATCTTATTGATCTGAAAATTATTGAGTCTCTTGGAGAGAATGGCAGAATTCGTTTAAGCGAACT
TGCTGAAGTGGTGGGCTTGTCGATACCATCAGTCAGCGAGCGGCTTGACAAGCTCCAGAAAAACGGGATTATCAAAGGGT
TCACCATGGAGGTTGATGAGCGTCAGCTCGGCTTTGATATTCAGGCTTTTGTTCGTGTAAGAATTGACTCTTCGAGGCAC
TACAAGTCGTTCATGGAGCATGTTCTCAACGAGGACGAGATCATGGAGTGCTTTTCCGTTACCGGTGAGGGGTCGCATAT
TCTCAAGGTCATGACGCATAACACCTCTTCACTTGAAAAATTTCTGTCGAGAATCCAGAGCTGGCCTGGAGTTTTAAGTA
CCAATACCAGTTTTGTGCTCTCCCAACTGAAAAAGAACAAGAAAATCAGCGCAGGTATTGTTCGCAATAATCTGCAGGAT
CGGCAGGTTCTGATTACTTTTGATGAAAAAAAATCAAGAAAGTGA

Upstream 100 bases:

>100_bases
AGGGATTTCGACTCTATATTATGAGTTTTTAAGAAAGAAGTTGTTTTTGTCTTATTTTTTGGTAAATTTCTTACAAAATC
GAATTAAATACAGTTCTGTT

Downstream 100 bases:

>100_bases
TCAGATGTAATTTTTAATAGCAAATTAATTTCATGCAAACAGCAAATCTAACTATAAGGAGGTTCTTTTGAGCATTGAGA
ATAAAATTCCGGTTTCGACC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSGHLDLIDLKIIESLGENGRIRLSELAEVVGLSIPSVSERLDKLQKNGIIKGFTMEVDERQLGFDIQAFVRVRIDSSRH
YKSFMEHVLNEDEIMECFSVTGEGSHILKVMTHNTSSLEKFLSRIQSWPGVLSTNTSFVLSQLKKNKKISAGIVRNNLQD
RQVLITFDEKKSRK

Sequences:

>Translated_174_residues
MSGHLDLIDLKIIESLGENGRIRLSELAEVVGLSIPSVSERLDKLQKNGIIKGFTMEVDERQLGFDIQAFVRVRIDSSRH
YKSFMEHVLNEDEIMECFSVTGEGSHILKVMTHNTSSLEKFLSRIQSWPGVLSTNTSFVLSQLKKNKKISAGIVRNNLQD
RQVLITFDEKKSRK
>Mature_173_residues
SGHLDLIDLKIIESLGENGRIRLSELAEVVGLSIPSVSERLDKLQKNGIIKGFTMEVDERQLGFDIQAFVRVRIDSSRHY
KSFMEHVLNEDEIMECFSVTGEGSHILKVMTHNTSSLEKFLSRIQSWPGVLSTNTSFVLSQLKKNKKISAGIVRNNLQDR
QVLITFDEKKSRK

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=137, Percent_Identity=32.8467153284672, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1787116, Length=148, Percent_Identity=30.4054054054054, Blast_Score=71, Evalue=3e-14,
Organism=Escherichia coli, GI87081742, Length=149, Percent_Identity=27.5167785234899, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 19776; Mature: 19645

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHLDLIDLKIIESLGENGRIRLSELAEVVGLSIPSVSERLDKLQKNGIIKGFTMEVDE
CCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCC
RQLGFDIQAFVRVRIDSSRHYKSFMEHVLNEDEIMECFSVTGEGSHILKVMTHNTSSLEK
HHHCCCHHHEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCHHHHHH
FLSRIQSWPGVLSTNTSFVLSQLKKNKKISAGIVRNNLQDRQVLITFDEKKSRK
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
SGHLDLIDLKIIESLGENGRIRLSELAEVVGLSIPSVSERLDKLQKNGIIKGFTMEVDE
CCCCHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCC
RQLGFDIQAFVRVRIDSSRHYKSFMEHVLNEDEIMECFSVTGEGSHILKVMTHNTSSLEK
HHHCCCHHHEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCHHHHHH
FLSRIQSWPGVLSTNTSFVLSQLKKNKKISAGIVRNNLQDRQVLITFDEKKSRK
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA