| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is dut
Identifier: 119356656
GI number: 119356656
Start: 938197
End: 938658
Strand: Direct
Name: dut
Synonym: Cpha266_0825
Alternate gene names: 119356656
Gene position: 938197-938658 (Clockwise)
Preceding gene: 119356654
Following gene: 119356662
Centisome position: 29.94
GC content: 46.97
Gene sequence:
>462_bases ATGCTTAAGGTAAAGATTGTTCGGTTAAACGAGAAAGCTCTTTTGCCGGTTTATGCAACAACGCATGCCGCAGGTATGGA CGTTGCCGCATGTCTTGAGGAAAATGTTGTGGTACTGCCCTTTGAAACGGCACTGATTCCTTCCGGATTTGCCATTGAAC TTCCCGAAGGATATGAAGCTCAGCTTCGTCCGAGAAGTGGTTTGGCACTTCGTCATCTGATTTCGCTGCCGAATACTCCT GCAACCATCGATGCCGATTATCGGGGAGAGGTTAAAATCATTCTCATCAATTATGGACAAGAGCCTTTTGTTGTACATCA TGGCGACAGGGTGGCTCAGATGGTCGTGGCAAAAGTGGAAAGGGTGTTTTTTGATGAAGTATTAACGCTTGCCTCATCGT CAAGAGCGGATGGTGGATTTGGTCATACCGGAATAGCGGGAAATCCGGAATCGAAAGCGTAA
Upstream 100 bases:
>100_bases TAGACTTTTTCAGACGATCTCTCCATTCGGGCTGTGATTTTAATTTCTATATTGGGTGCAACGAACCGGTAACATAATGT CAAGATAACCCATATTTCTG
Downstream 100 bases:
>100_bases CCGCGCTCTATAAGGGTGTCCTGTAAAACAGCAAACGAAAAGAGCGCTGTTGTCAGGTCAGGGACAAAGCGCTCTTCAGA TTTATTTCAGGGAACAGGCT
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MLKVKIVRLNEKALLPVYATTHAAGMDVAACLEENVVVLPFETALIPSGFAIELPEGYEAQLRPRSGLALRHLISLPNTP ATIDADYRGEVKIILINYGQEPFVVHHGDRVAQMVVAKVERVFFDEVLTLASSSRADGGFGHTGIAGNPESKA
Sequences:
>Translated_153_residues MLKVKIVRLNEKALLPVYATTHAAGMDVAACLEENVVVLPFETALIPSGFAIELPEGYEAQLRPRSGLALRHLISLPNTP ATIDADYRGEVKIILINYGQEPFVVHHGDRVAQMVVAKVERVFFDEVLTLASSSRADGGFGHTGIAGNPESKA >Mature_153_residues MLKVKIVRLNEKALLPVYATTHAAGMDVAACLEENVVVLPFETALIPSGFAIELPEGYEAQLRPRSGLALRHLISLPNTP ATIDADYRGEVKIILINYGQEPFVVHHGDRVAQMVVAKVERVFFDEVLTLASSSRADGGFGHTGIAGNPESKA
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family
Homologues:
Organism=Homo sapiens, GI4503423, Length=146, Percent_Identity=37.6712328767123, Blast_Score=105, Evalue=2e-23, Organism=Homo sapiens, GI70906444, Length=146, Percent_Identity=37.6712328767123, Blast_Score=104, Evalue=2e-23, Organism=Homo sapiens, GI70906441, Length=146, Percent_Identity=37.6712328767123, Blast_Score=104, Evalue=4e-23, Organism=Escherichia coli, GI1790071, Length=146, Percent_Identity=39.7260273972603, Blast_Score=113, Evalue=6e-27, Organism=Caenorhabditis elegans, GI71988561, Length=143, Percent_Identity=37.7622377622378, Blast_Score=110, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6319729, Length=142, Percent_Identity=32.3943661971831, Blast_Score=83, Evalue=2e-17, Organism=Drosophila melanogaster, GI24583610, Length=153, Percent_Identity=33.9869281045752, Blast_Score=96, Evalue=6e-21, Organism=Drosophila melanogaster, GI19921126, Length=153, Percent_Identity=33.9869281045752, Blast_Score=96, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DUT_CHLPD (A1BEP9)
Other databases:
- EMBL: CP000492 - RefSeq: YP_911300.1 - ProteinModelPortal: A1BEP9 - SMR: A1BEP9 - STRING: A1BEP9 - GeneID: 4570323 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_0825 - NMPDR: fig|290317.7.peg.875 - eggNOG: COG0756 - HOGENOM: HBG436079 - OMA: LDLRACI - ProtClustDB: CLSK637750 - HAMAP: MF_00116 - InterPro: IPR008180 - InterPro: IPR008181 - TIGRFAMs: TIGR00576
Pfam domain/function: PF00692 dUTPase
EC number: =3.6.1.23
Molecular weight: Translated: 16520; Mature: 16520
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: BINDING 78-78 BINDING 92-92
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKVKIVRLNEKALLPVYATTHAAGMDVAACLEENVVVLPFETALIPSGFAIELPEGYEA CEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHCCEEEEEEHHHCCCCCCEEECCCCCCE QLRPRSGLALRHLISLPNTPATIDADYRGEVKIILINYGQEPFVVHHGDRVAQMVVAKVE EECCCCCHHHHHHHHCCCCCCEEECCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHH RVFFDEVLTLASSSRADGGFGHTGIAGNPESKA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLKVKIVRLNEKALLPVYATTHAAGMDVAACLEENVVVLPFETALIPSGFAIELPEGYEA CEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHCCEEEEEEHHHCCCCCCEEECCCCCCE QLRPRSGLALRHLISLPNTPATIDADYRGEVKIILINYGQEPFVVHHGDRVAQMVVAKVE EECCCCCHHHHHHHHCCCCCCEEECCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHH RVFFDEVLTLASSSRADGGFGHTGIAGNPESKA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA