| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356649
Identifier: 119356649
GI number: 119356649
Start: 932387
End: 932878
Strand: Reverse
Name: 119356649
Synonym: Cpha266_0818
Alternate gene names: NA
Gene position: 932878-932387 (Counterclockwise)
Preceding gene: 119356650
Following gene: 119356648
Centisome position: 29.77
GC content: 44.51
Gene sequence:
>492_bases GTGACAAAAAAAATACCCATAACAATAGTCCTCCTTGTCATCACCTGCCTCCTGCAGTTGTTCGGCTTGTCGCGTCTTGT GATTTTTTCTCTTACAGTCGATGCCGTCACCATCTTTCTGGCTGTGGTCTCTGTTATTTTCGGTCAGCGTATCGGCATGA CTTTCGGATTCGGTGCCGGTTTTTTTATTGGCTTTTTCACAGGACATCCCGGACTTGAAATTCTTGTCAGAACCATGGAG GGTTTTGTCGCGGGATATTGCAGCGTGCCTCCTGACAGCCATGCCACAAGCAAACAAAAATCAAGAAAGCTCTACCTTGC AGTTGTTCTTGCCATATTTGCCGGCAATATAATTTTCGCACTTGGCATCAATCCGCTTGCGCTTCCTTTTGGATACCGGG TTTTCTTGCTTGGAGGAGTTGAAGCGATTCTCTCTCTCGCCATTACTTTTGTACTCAATCGATTTTTTTTAAAAAAACTT CTTTCAGAGTGA
Upstream 100 bases:
>100_bases ATGTACTGGTTGCGCCCCTGAAAGTGGATACTGAAAAGGAAGAGATGATCCATCATACTGAACTGGAAGACAAACAACCC TAATAACAGCATTGTAACCT
Downstream 100 bases:
>100_bases ACAATGGATAAAATTCAACGAGGCACGCCACTCGTATCTTCCCTTGTCATCGTTGTTTTTGTTGTTCTTCTTGGCAGACT TTTCTACATCCAGGTTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Transduction Histidine Kinase LytS
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTKKIPITIVLLVITCLLQLFGLSRLVIFSLTVDAVTIFLAVVSVIFGQRIGMTFGFGAGFFIGFFTGHPGLEILVRTME GFVAGYCSVPPDSHATSKQKSRKLYLAVVLAIFAGNIIFALGINPLALPFGYRVFLLGGVEAILSLAITFVLNRFFLKKL LSE
Sequences:
>Translated_163_residues MTKKIPITIVLLVITCLLQLFGLSRLVIFSLTVDAVTIFLAVVSVIFGQRIGMTFGFGAGFFIGFFTGHPGLEILVRTME GFVAGYCSVPPDSHATSKQKSRKLYLAVVLAIFAGNIIFALGINPLALPFGYRVFLLGGVEAILSLAITFVLNRFFLKKL LSE >Mature_162_residues TKKIPITIVLLVITCLLQLFGLSRLVIFSLTVDAVTIFLAVVSVIFGQRIGMTFGFGAGFFIGFFTGHPGLEILVRTMEG FVAGYCSVPPDSHATSKQKSRKLYLAVVLAIFAGNIIFALGINPLALPFGYRVFLLGGVEAILSLAITFVLNRFFLKKLL SE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17708; Mature: 17577
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKIPITIVLLVITCLLQLFGLSRLVIFSLTVDAVTIFLAVVSVIFGQRIGMTFGFGAG CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHH FFIGFFTGHPGLEILVRTMEGFVAGYCSVPPDSHATSKQKSRKLYLAVVLAIFAGNIIFA HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE LGINPLALPFGYRVFLLGGVEAILSLAITFVLNRFFLKKLLSE ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKKIPITIVLLVITCLLQLFGLSRLVIFSLTVDAVTIFLAVVSVIFGQRIGMTFGFGAG CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHH FFIGFFTGHPGLEILVRTMEGFVAGYCSVPPDSHATSKQKSRKLYLAVVLAIFAGNIIFA HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE LGINPLALPFGYRVFLLGGVEAILSLAITFVLNRFFLKKLLSE ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA