| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356650
Identifier: 119356650
GI number: 119356650
Start: 932896
End: 933738
Strand: Reverse
Name: 119356650
Synonym: Cpha266_0819
Alternate gene names: NA
Gene position: 933738-932896 (Counterclockwise)
Preceding gene: 119356655
Following gene: 119356649
Centisome position: 29.79
GC content: 46.26
Gene sequence:
>843_bases GTGCAGAAGTTCTTCAGGTTTTTTATAAAACATAACGCTTACCTGCTCCTGCTGCTCTACTGCGGCATCGGCTTGTTGTT CATCAAGCTTGAGAAAGTCGACATACTCTCCCGTCTTCGTCAGAACAGTGCCGAATTCGAAGCATTCGTCTCGGACAGGC TCATGAGCTACAGCTCTTTCTGGAACCTGAAAAAAGAAAATGAGCAACTTCTGCGAGTGAATGCCGAACTGGTAGCAAAA AATATTTCGCTGCAAACTGCTTCGCGTGACTTTTATGCCCGACAAAAACTCCTTTCAGACAGCACCATCAACACACAGAA CTTTAAAATCGCACGAGTTATTGACCGTCGATTCAGCTCTACGGATAACTCTCTGTTGATTGATGCCGGCTCAAACGACG GGATTCGTCCCGATATGAGCGTCCTGACTCCTGACGGGCTTGTGGGACGAATTGTCTTTGTTTCAAAGCATTACGCAAAG GTCATGCCGGTTATCCATCCCGATTTCAAGGTCAGCGTCTTTTCCGACAAGAGCGGAGCCACAGGCCTGCTCTCATGGAA GGGGGGCAAAGAGCATATAGCCCAGATTGAACATATCCCTTTAAGCAGCCACATTACCCTTAACGAAACCATACTGACAA CAGACTTCAGCACATTTTCCCCAAGGGGGGTTCCTCTCGGAAGGGTAATCAGCATTAAACCTGACAAACTTTTTTATGCA ATTGATATCTGGCTTGCCGTTGATTTTTCATCATTAACCCATGTACTGGTTGCGCCCCTGAAAGTGGATACTGAAAAGGA AGAGATGATCCATCATACTGAACTGGAAGACAAACAACCCTAA
Upstream 100 bases:
>100_bases AAAAAACGCCAGGCTGCTTCACTCCGCCTTTAAAAGCGGAACTCATCCTGAAAAAGGATAATAATAACTCCTTATTGTGT CATAACCGGAAAATCGAACC
Downstream 100 bases:
>100_bases TAACAGCATTGTAACCTGTGACAAAAAAAATACCCATAACAATAGTCCTCCTTGTCATCACCTGCCTCCTGCAGTTGTTC GGCTTGTCGCGTCTTGTGAT
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: Cell Shape-Determining Protein MreC; Rod Shape-Determining Protein; Rod Shape-Determining Protein Mrec; Cell Shape-Determining Protein; Cell Shape Determining Protein MreC
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MQKFFRFFIKHNAYLLLLLYCGIGLLFIKLEKVDILSRLRQNSAEFEAFVSDRLMSYSSFWNLKKENEQLLRVNAELVAK NISLQTASRDFYARQKLLSDSTINTQNFKIARVIDRRFSSTDNSLLIDAGSNDGIRPDMSVLTPDGLVGRIVFVSKHYAK VMPVIHPDFKVSVFSDKSGATGLLSWKGGKEHIAQIEHIPLSSHITLNETILTTDFSTFSPRGVPLGRVISIKPDKLFYA IDIWLAVDFSSLTHVLVAPLKVDTEKEEMIHHTELEDKQP
Sequences:
>Translated_280_residues MQKFFRFFIKHNAYLLLLLYCGIGLLFIKLEKVDILSRLRQNSAEFEAFVSDRLMSYSSFWNLKKENEQLLRVNAELVAK NISLQTASRDFYARQKLLSDSTINTQNFKIARVIDRRFSSTDNSLLIDAGSNDGIRPDMSVLTPDGLVGRIVFVSKHYAK VMPVIHPDFKVSVFSDKSGATGLLSWKGGKEHIAQIEHIPLSSHITLNETILTTDFSTFSPRGVPLGRVISIKPDKLFYA IDIWLAVDFSSLTHVLVAPLKVDTEKEEMIHHTELEDKQP >Mature_280_residues MQKFFRFFIKHNAYLLLLLYCGIGLLFIKLEKVDILSRLRQNSAEFEAFVSDRLMSYSSFWNLKKENEQLLRVNAELVAK NISLQTASRDFYARQKLLSDSTINTQNFKIARVIDRRFSSTDNSLLIDAGSNDGIRPDMSVLTPDGLVGRIVFVSKHYAK VMPVIHPDFKVSVFSDKSGATGLLSWKGGKEHIAQIEHIPLSSHITLNETILTTDFSTFSPRGVPLGRVISIKPDKLFYA IDIWLAVDFSSLTHVLVAPLKVDTEKEEMIHHTELEDKQP
Specific function: Unknown
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31817; Mature: 31817
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKFFRFFIKHNAYLLLLLYCGIGLLFIKLEKVDILSRLRQNSAEFEAFVSDRLMSYSSF CHHHHHHHHHCCHHHHHHHHHHHHEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH WNLKKENEQLLRVNAELVAKNISLQTASRDFYARQKLLSDSTINTQNFKIARVIDRRFSS CCCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCC TDNSLLIDAGSNDGIRPDMSVLTPDGLVGRIVFVSKHYAKVMPVIHPDFKVSVFSDKSGA CCCEEEEECCCCCCCCCCCEEECCCCCEEEEEEEEHHHHHHCCEECCCEEEEEEECCCCC TGLLSWKGGKEHIAQIEHIPLSSHITLNETILTTDFSTFSPRGVPLGRVISIKPDKLFYA CEEEEECCCHHHHHHHHCCCCCCCEEECCEEEEECCCCCCCCCCCCCEEEEECCCCEEEE IDIWLAVDFSSLTHVLVAPLKVDTEKEEMIHHTELEDKQP EEEEEEEEHHHHHHHHEECEECCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MQKFFRFFIKHNAYLLLLLYCGIGLLFIKLEKVDILSRLRQNSAEFEAFVSDRLMSYSSF CHHHHHHHHHCCHHHHHHHHHHHHEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH WNLKKENEQLLRVNAELVAKNISLQTASRDFYARQKLLSDSTINTQNFKIARVIDRRFSS CCCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCC TDNSLLIDAGSNDGIRPDMSVLTPDGLVGRIVFVSKHYAKVMPVIHPDFKVSVFSDKSGA CCCEEEEECCCCCCCCCCCEEECCCCCEEEEEEEEHHHHHHCCEECCCEEEEEEECCCCC TGLLSWKGGKEHIAQIEHIPLSSHITLNETILTTDFSTFSPRGVPLGRVISIKPDKLFYA CEEEEECCCHHHHHHHHCCCCCCCEEECCEEEEECCCCCCCCCCCCCEEEEECCCCEEEE IDIWLAVDFSSLTHVLVAPLKVDTEKEEMIHHTELEDKQP EEEEEEEEHHHHHHHHEECEECCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA