| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356628
Identifier: 119356628
GI number: 119356628
Start: 907970
End: 908656
Strand: Reverse
Name: 119356628
Synonym: Cpha266_0797
Alternate gene names: NA
Gene position: 908656-907970 (Counterclockwise)
Preceding gene: 119356629
Following gene: 119356627
Centisome position: 28.99
GC content: 47.74
Gene sequence:
>687_bases ATGATGATGCTGAGCCGGGTCTATGAAAAAATGCAGGATGATTTTGACATCACTCATGCACATCTCGAATACCTGACTCT GCCCAATGCCTGCAAAACCCGGACTCCAACCGTTCTGACAATGCACGGCAGGCTTGATCAGGGCGACAGTCCGACAATGC TCAGGTTATACCGTGATATGGCTTCTGTCTCAATCAGTAATTCCCGCCGGCGCCCGCTCGAAAATATCAACCGGATCAAT ACTATTCATCACGGCTATCCTGCCTTCAGTTTTGAGTTGAATGAGCATCCTGTGGATTATGTCCTCAATCCGGGTCGTTT TTCTGAAGAGAAAAAGCCGGATCAGGCAATCATGCTGGCGAAGGAATGCAATATGCCGCTGAAAAACGCCAAAGCGCTGC TCAATACCATAAACCGGCCTGAACCGTTTGGACTGGTCATGATCGTAGCACTGGCCTGCGGGACACCTGTGATTGTGAGG GGATGTGGTTCCGGAAGTGATCACGCATGGAAAAAAAGAGTGTCAATATTCCGATTTTGTTCGGAGTGGGGGCAATTGTT GCCAGCGAAGTACTGCTGGTTTACGGCAACAGCCGTGAATAAATCAAATGACGATAGTAGTCTTTCAGGGCTCACCTCCC TGATAGTCAACATTTTAAATATAACATCATGTGCAAATACCAGATAG
Upstream 100 bases:
>100_bases TATGGTTATCAGCCGGGCGTAAATCGCTTGCTGAGAGAACGCTCTCTCTGGAAGCCCCTCTGCTCTCCGGTGTTTCTCTC AAAAAAGAGGGAAATTGACG
Downstream 100 bases:
>100_bases CTGTCATCGTCGGCAGTCTTCGAAAGGATTCATTTAACCGCAAATTGGCAACCGCCCTTGGAATGCTGGAACATCCGGAG TTGTCATTCAAGCAGTTACA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Group 1 Glycosyl Transferase; Sugar Transferase; Lipopolysaccharide N-Acetylglucosaminyltransferase; Glycosyltransferase Protein; UDP-Glycosyltransferase/Glycogen Phosphorylase
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MMMLSRVYEKMQDDFDITHAHLEYLTLPNACKTRTPTVLTMHGRLDQGDSPTMLRLYRDMASVSISNSRRRPLENINRIN TIHHGYPAFSFELNEHPVDYVLNPGRFSEEKKPDQAIMLAKECNMPLKNAKALLNTINRPEPFGLVMIVALACGTPVIVR GCGSGSDHAWKKRVSIFRFCSEWGQLLPAKYCWFTATAVNKSNDDSSLSGLTSLIVNILNITSCANTR
Sequences:
>Translated_228_residues MMMLSRVYEKMQDDFDITHAHLEYLTLPNACKTRTPTVLTMHGRLDQGDSPTMLRLYRDMASVSISNSRRRPLENINRIN TIHHGYPAFSFELNEHPVDYVLNPGRFSEEKKPDQAIMLAKECNMPLKNAKALLNTINRPEPFGLVMIVALACGTPVIVR GCGSGSDHAWKKRVSIFRFCSEWGQLLPAKYCWFTATAVNKSNDDSSLSGLTSLIVNILNITSCANTR >Mature_228_residues MMMLSRVYEKMQDDFDITHAHLEYLTLPNACKTRTPTVLTMHGRLDQGDSPTMLRLYRDMASVSISNSRRRPLENINRIN TIHHGYPAFSFELNEHPVDYVLNPGRFSEEKKPDQAIMLAKECNMPLKNAKALLNTINRPEPFGLVMIVALACGTPVIVR GCGSGSDHAWKKRVSIFRFCSEWGQLLPAKYCWFTATAVNKSNDDSSLSGLTSLIVNILNITSCANTR
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25679; Mature: 25679
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMLSRVYEKMQDDFDITHAHLEYLTLPNACKTRTPTVLTMHGRLDQGDSPTMLRLYRDM CCHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH ASVSISNSRRRPLENINRINTIHHGYPAFSFELNEHPVDYVLNPGRFSEEKKPDQAIMLA HHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCCHHHEEHH KECNMPLKNAKALLNTINRPEPFGLVMIVALACGTPVIVRGCGSGSDHAWKKRVSIFRFC HHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH SEWGQLLPAKYCWFTATAVNKSNDDSSLSGLTSLIVNILNITSCANTR HHHHHHCCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMMLSRVYEKMQDDFDITHAHLEYLTLPNACKTRTPTVLTMHGRLDQGDSPTMLRLYRDM CCHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH ASVSISNSRRRPLENINRINTIHHGYPAFSFELNEHPVDYVLNPGRFSEEKKPDQAIMLA HHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCCHHHEEHH KECNMPLKNAKALLNTINRPEPFGLVMIVALACGTPVIVRGCGSGSDHAWKKRVSIFRFC HHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH SEWGQLLPAKYCWFTATAVNKSNDDSSLSGLTSLIVNILNITSCANTR HHHHHHCCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA