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The map label for this gene is 119356629

Identifier: 119356629

GI number: 119356629

Start: 908659

End: 909117

Strand: Reverse

Name: 119356629

Synonym: Cpha266_0798

Alternate gene names: NA

Gene position: 909117-908659 (Counterclockwise)

Preceding gene: 119356631

Following gene: 119356628

Centisome position: 29.01

GC content: 44.01

Gene sequence:

>459_bases
GTGACCAGGGAAAAAAGAAAGCCGTTAGATTTAATGGATGATATATACACCCTTGCGTATTGGATGACCGGATCTGAGGC
GTCAGCCACTGAACTGGTCAACATAACCTATCTGAATGTCACTCTTGATACGCATGAAAGTGAGGTATACAAAACATTCA
GAGAGTGTTATTTCAATACTTTCAGTCACGACAATGCAACCTGTATTCCGAAACCGTCATGTACTCCTATGGAAAAGCTG
GGAACGGTATTACTAAAGCGGGATGCCGATATAAAACTTTCGGTACTGCTTTCAGCGGTGTCAGGATTAAAACACAGATC
AATATCGAACATACTCGGCAAACCTCTTGACACCATCAGAGTATGGTTATCAGCCGGGCGTAAATCGCTTGCTGAGAGAA
CGCTCTCTCTGGAAGCCCCTCTGCTCTCCGGTGTTTCTCTCAAAAAAGAGGGAAATTGA

Upstream 100 bases:

>100_bases
GTCTGGCCTGGTCTGTATGTTTTCTGCTATTTCATTGAGATAAAATGCTTTAAATTACCTGTCCTTACAACTGTTCTGAA
AGCCATTAAAGGGAGAAACC

Downstream 100 bases:

>100_bases
CGATGATGATGCTGAGCCGGGTCTATGAAAAAATGCAGGATGATTTTGACATCACTCATGCACATCTCGAATACCTGACT
CTGCCCAATGCCTGCAAAAC

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit; Sigma-

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTREKRKPLDLMDDIYTLAYWMTGSEASATELVNITYLNVTLDTHESEVYKTFRECYFNTFSHDNATCIPKPSCTPMEKL
GTVLLKRDADIKLSVLLSAVSGLKHRSISNILGKPLDTIRVWLSAGRKSLAERTLSLEAPLLSGVSLKKEGN

Sequences:

>Translated_152_residues
MTREKRKPLDLMDDIYTLAYWMTGSEASATELVNITYLNVTLDTHESEVYKTFRECYFNTFSHDNATCIPKPSCTPMEKL
GTVLLKRDADIKLSVLLSAVSGLKHRSISNILGKPLDTIRVWLSAGRKSLAERTLSLEAPLLSGVSLKKEGN
>Mature_151_residues
TREKRKPLDLMDDIYTLAYWMTGSEASATELVNITYLNVTLDTHESEVYKTFRECYFNTFSHDNATCIPKPSCTPMEKLG
TVLLKRDADIKLSVLLSAVSGLKHRSISNILGKPLDTIRVWLSAGRKSLAERTLSLEAPLLSGVSLKKEGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16996; Mature: 16865

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTREKRKPLDLMDDIYTLAYWMTGSEASATELVNITYLNVTLDTHESEVYKTFRECYFNT
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCHHHHHHHHHHHHHHC
FSHDNATCIPKPSCTPMEKLGTVLLKRDADIKLSVLLSAVSGLKHRSISNILGKPLDTIR
CCCCCCEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VWLSAGRKSLAERTLSLEAPLLSGVSLKKEGN
HHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCC
>Mature Secondary Structure 
TREKRKPLDLMDDIYTLAYWMTGSEASATELVNITYLNVTLDTHESEVYKTFRECYFNT
CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCHHHHHHHHHHHHHHC
FSHDNATCIPKPSCTPMEKLGTVLLKRDADIKLSVLLSAVSGLKHRSISNILGKPLDTIR
CCCCCCEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VWLSAGRKSLAERTLSLEAPLLSGVSLKKEGN
HHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA