| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356613
Identifier: 119356613
GI number: 119356613
Start: 891554
End: 892336
Strand: Direct
Name: 119356613
Synonym: Cpha266_0781
Alternate gene names: NA
Gene position: 891554-892336 (Clockwise)
Preceding gene: 119356611
Following gene: 119356614
Centisome position: 28.45
GC content: 43.17
Gene sequence:
>783_bases ATGGCTTGCTTATGTAACACGATAGACACCGTGCCAAAAGATTTCATCATTGAACAGCTACAACAGCGGTTTGCTCATCA CCCCCACATTACCCGTGAGGAGTTGCTCGGCTTTTACAGGTCGTTTGAGCCTGATATAAAAGATTCAACCTTTGCCTGGC GGATCCATTCGCTTAAAGCAAAGAACCTGCTTAAGCCCATAAGAAGAGGAGTTTACATCTTTTCAGCAAAGCCTCAGTTT CACCCGCAGGTAGAGCCAAAACTAAGAGCGATTGCCCGAAAACTCAATAAGCAATTTCCAGTCGCACGGCATTGTGTGTG GAGCACCCGATGGCTGAGCGAGTGGATGATTCACCAACCTGATAGATTTTTGCTGTTGGTTGAGGTTGAAGCTGTGGCAA CGGAATCAGTTTTTTATTTTCTGAAGGATGAGAAATATAAAAACGTGTACTTAAACCCTGACGAAAACACCCTTGAGCGT TACATTAATGAAGAGAGGGAGTCAATCATTGTTAAACCTCTCATAACCAAAGCTCCCCTTGAAAAAGAAGAGAAAGTAGC TACACCCTCACTTGAAAAAATATTGGTAGACATTTTTGTTGATCGTAAACTATTCAGTGTTTTTCAAGGCAGTGAGCTGG TGCAAATATTCAACACACTCAATAGGATGTACGCCCTCAACATCACAAGAATGACGGCTTATGCCAAACGAAGGGGCAAA ATGCAGGAGCTGATCGATTTTATGACAAAAAACACCCACGTCAGTGCGATACCGAGCAAATGA
Upstream 100 bases:
>100_bases TATTTCCAGTTTTAGTAATAACTGGCAGTTATTTGAATTCAAATATTGGCCAATAATATCGCTATACTATCCAATATTTG TTATTTATTATATACATTGA
Downstream 100 bases:
>100_bases TCATCCCGAAATCATATACACCTGACTGGATCAGGGAAAAAAGGAAAGCCTACCGCAAAAGCCCCCCTAACCCTGCCATC ATGGAAAAGGTCATTTATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MACLCNTIDTVPKDFIIEQLQQRFAHHPHITREELLGFYRSFEPDIKDSTFAWRIHSLKAKNLLKPIRRGVYIFSAKPQF HPQVEPKLRAIARKLNKQFPVARHCVWSTRWLSEWMIHQPDRFLLLVEVEAVATESVFYFLKDEKYKNVYLNPDENTLER YINEERESIIVKPLITKAPLEKEEKVATPSLEKILVDIFVDRKLFSVFQGSELVQIFNTLNRMYALNITRMTAYAKRRGK MQELIDFMTKNTHVSAIPSK
Sequences:
>Translated_260_residues MACLCNTIDTVPKDFIIEQLQQRFAHHPHITREELLGFYRSFEPDIKDSTFAWRIHSLKAKNLLKPIRRGVYIFSAKPQF HPQVEPKLRAIARKLNKQFPVARHCVWSTRWLSEWMIHQPDRFLLLVEVEAVATESVFYFLKDEKYKNVYLNPDENTLER YINEERESIIVKPLITKAPLEKEEKVATPSLEKILVDIFVDRKLFSVFQGSELVQIFNTLNRMYALNITRMTAYAKRRGK MQELIDFMTKNTHVSAIPSK >Mature_259_residues ACLCNTIDTVPKDFIIEQLQQRFAHHPHITREELLGFYRSFEPDIKDSTFAWRIHSLKAKNLLKPIRRGVYIFSAKPQFH PQVEPKLRAIARKLNKQFPVARHCVWSTRWLSEWMIHQPDRFLLLVEVEAVATESVFYFLKDEKYKNVYLNPDENTLERY INEERESIIVKPLITKAPLEKEEKVATPSLEKILVDIFVDRKLFSVFQGSELVQIFNTLNRMYALNITRMTAYAKRRGKM QELIDFMTKNTHVSAIPSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30697; Mature: 30566
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACLCNTIDTVPKDFIIEQLQQRFAHHPHITREELLGFYRSFEPDIKDSTFAWRIHSLKA CCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHEEHHHHHHH KNLLKPIRRGVYIFSAKPQFHPQVEPKLRAIARKLNKQFPVARHCVWSTRWLSEWMIHQP HHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC DRFLLLVEVEAVATESVFYFLKDEKYKNVYLNPDENTLERYINEERESIIVKPLITKAPL CCEEEEEEEHHHHHHHHHEEEECCCCCEEEECCCHHHHHHHHHHHHHHEEHHHHHHCCCC EKEEKVATPSLEKILVDIFVDRKLFSVFQGSELVQIFNTLNRMYALNITRMTAYAKRRGK CCHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC MQELIDFMTKNTHVSAIPSK HHHHHHHHHCCCEEECCCCC >Mature Secondary Structure ACLCNTIDTVPKDFIIEQLQQRFAHHPHITREELLGFYRSFEPDIKDSTFAWRIHSLKA CCCCCHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHEEHHHHHHH KNLLKPIRRGVYIFSAKPQFHPQVEPKLRAIARKLNKQFPVARHCVWSTRWLSEWMIHQP HHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC DRFLLLVEVEAVATESVFYFLKDEKYKNVYLNPDENTLERYINEERESIIVKPLITKAPL CCEEEEEEEHHHHHHHHHEEEECCCCCEEEECCCHHHHHHHHHHHHHHEEHHHHHHCCCC EKEEKVATPSLEKILVDIFVDRKLFSVFQGSELVQIFNTLNRMYALNITRMTAYAKRRGK CCHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC MQELIDFMTKNTHVSAIPSK HHHHHHHHHCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA