| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356614
Identifier: 119356614
GI number: 119356614
Start: 892333
End: 893430
Strand: Direct
Name: 119356614
Synonym: Cpha266_0782
Alternate gene names: NA
Gene position: 892333-893430 (Clockwise)
Preceding gene: 119356613
Following gene: 119356619
Centisome position: 28.47
GC content: 43.81
Gene sequence:
>1098_bases ATGATCATCCCGAAATCATATACACCTGACTGGATCAGGGAAAAAAGGAAAGCCTACCGCAAAAGCCCCCCTAACCCTGC CATCATGGAAAAGGTCATTTATGCCCTTTCTTTGGTCGAGCAGTTGGCGAAAACCGACCTTTCTTTTACCTTCAAAGGCG GCACAAGTCTCCTTCTTATTTTACCGGAACCCCAACGGTTCTCCATTGATGTAGATATTGTTACCACCGAAAGCAAGGGA AAAATCGAAGCCGTTTTAACCGGCATTTGTTCGGGAGGTATATTCAGTAAATTCGAATTAGACGAGCGGAGAAGCTATAA ACCCGGCATACCCAAAGCTCACTACAAACTCATTTTCTTTTCGCAGTGGGACAACAAAGAGCTATGGATCTTGCTGGATA TTCTGTTTGAAGAGCATGGCTACCCATCCTTGGTGCAAGCACCGATTATAAACGAATGGATTGTAACAGACGACCCTCTG GTTACCGTTCATATACCTTCCGTTGATTCCATCACAGGTGATAAACTCACCGCTTTTGCTCCCAATACCGTTGGTATTCG ATTCAGAGTTGAGGATGCCAACGGTGGCATTACCGAAAAACAAATGGAAGTCATGAAGCAACTCTTCGACATTGGCATTT TGTTCGACAGGATATCCAATCTCGATCATCTCAAGCAGTCCTTTACCACAACAGTACAAAAAGAGATTTCCTACAGGGGA GAGGCAAACATTACAATCGAAGCAGTGTTGAACGACATTATCAACACCTCATTGATGATTGGATCACTGGGCAAATTCTT TGATCCAAAGGGAGAGTTTCAGCACATAGCAAAAGGCCTGACGCAATTAAAATCCTACATCTACAATGGAGCATTCCGTC CTGATGATGCGGTATTGGCATCTTCCAAAGCGGCTTATCTGGCGGCTATGATCCTGACAGGTTATGATGGAGAAATAAAA CGATGGCAGCCTCGCGATGATATTACGAAGTACAGCATAGCTCCTGTAGAGTACCAATTTCTCAATAAACGAAGAAACGT TGCTGGAGCACCCTTATTCTATTGGTATCAAACGTTGGGCTTATTGGGGAAATTATAA
Upstream 100 bases:
>100_bases ACATCACAAGAATGACGGCTTATGCCAAACGAAGGGGCAAAATGCAGGAGCTGATCGATTTTATGACAAAAAACACCCAC GTCAGTGCGATACCGAGCAA
Downstream 100 bases:
>100_bases CCAGATGTGATCAGATGAATATTTCGGAGCAAATTGTACACTCCGGAGCTGTCGGTGCCTGATTGATGCGGCTGTACCAA AACTGATGGGTGTATGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MIIPKSYTPDWIREKRKAYRKSPPNPAIMEKVIYALSLVEQLAKTDLSFTFKGGTSLLLILPEPQRFSIDVDIVTTESKG KIEAVLTGICSGGIFSKFELDERRSYKPGIPKAHYKLIFFSQWDNKELWILLDILFEEHGYPSLVQAPIINEWIVTDDPL VTVHIPSVDSITGDKLTAFAPNTVGIRFRVEDANGGITEKQMEVMKQLFDIGILFDRISNLDHLKQSFTTTVQKEISYRG EANITIEAVLNDIINTSLMIGSLGKFFDPKGEFQHIAKGLTQLKSYIYNGAFRPDDAVLASSKAAYLAAMILTGYDGEIK RWQPRDDITKYSIAPVEYQFLNKRRNVAGAPLFYWYQTLGLLGKL
Sequences:
>Translated_365_residues MIIPKSYTPDWIREKRKAYRKSPPNPAIMEKVIYALSLVEQLAKTDLSFTFKGGTSLLLILPEPQRFSIDVDIVTTESKG KIEAVLTGICSGGIFSKFELDERRSYKPGIPKAHYKLIFFSQWDNKELWILLDILFEEHGYPSLVQAPIINEWIVTDDPL VTVHIPSVDSITGDKLTAFAPNTVGIRFRVEDANGGITEKQMEVMKQLFDIGILFDRISNLDHLKQSFTTTVQKEISYRG EANITIEAVLNDIINTSLMIGSLGKFFDPKGEFQHIAKGLTQLKSYIYNGAFRPDDAVLASSKAAYLAAMILTGYDGEIK RWQPRDDITKYSIAPVEYQFLNKRRNVAGAPLFYWYQTLGLLGKL >Mature_365_residues MIIPKSYTPDWIREKRKAYRKSPPNPAIMEKVIYALSLVEQLAKTDLSFTFKGGTSLLLILPEPQRFSIDVDIVTTESKG KIEAVLTGICSGGIFSKFELDERRSYKPGIPKAHYKLIFFSQWDNKELWILLDILFEEHGYPSLVQAPIINEWIVTDDPL VTVHIPSVDSITGDKLTAFAPNTVGIRFRVEDANGGITEKQMEVMKQLFDIGILFDRISNLDHLKQSFTTTVQKEISYRG EANITIEAVLNDIINTSLMIGSLGKFFDPKGEFQHIAKGLTQLKSYIYNGAFRPDDAVLASSKAAYLAAMILTGYDGEIK RWQPRDDITKYSIAPVEYQFLNKRRNVAGAPLFYWYQTLGLLGKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41287; Mature: 41287
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPKSYTPDWIREKRKAYRKSPPNPAIMEKVIYALSLVEQLAKTDLSFTFKGGTSLLLI CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEE LPEPQRFSIDVDIVTTESKGKIEAVLTGICSGGIFSKFELDERRSYKPGIPKAHYKLIFF ECCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCCCEEECCHHCCCCCCCCCCEEEEEEE SQWDNKELWILLDILFEEHGYPSLVQAPIINEWIVTDDPLVTVHIPSVDSITGDKLTAFA EECCCCCEEEEEEEHHHCCCCCCHHHCCCCCCEEECCCCEEEEECCCCCCCCCCCEEEEC PNTVGIRFRVEDANGGITEKQMEVMKQLFDIGILFDRISNLDHLKQSFTTTVQKEISYRG CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC EANITIEAVLNDIINTSLMIGSLGKFFDPKGEFQHIAKGLTQLKSYIYNGAFRPDDAVLA CCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH SSKAAYLAAMILTGYDGEIKRWQPRDDITKYSIAPVEYQFLNKRRNVAGAPLFYWYQTLG CCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCHHHHHHHHHH LLGKL HHCCC >Mature Secondary Structure MIIPKSYTPDWIREKRKAYRKSPPNPAIMEKVIYALSLVEQLAKTDLSFTFKGGTSLLLI CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEE LPEPQRFSIDVDIVTTESKGKIEAVLTGICSGGIFSKFELDERRSYKPGIPKAHYKLIFF ECCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCCCEEECCHHCCCCCCCCCCEEEEEEE SQWDNKELWILLDILFEEHGYPSLVQAPIINEWIVTDDPLVTVHIPSVDSITGDKLTAFA EECCCCCEEEEEEEHHHCCCCCCHHHCCCCCCEEECCCCEEEEECCCCCCCCCCCEEEEC PNTVGIRFRVEDANGGITEKQMEVMKQLFDIGILFDRISNLDHLKQSFTTTVQKEISYRG CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC EANITIEAVLNDIINTSLMIGSLGKFFDPKGEFQHIAKGLTQLKSYIYNGAFRPDDAVLA CCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH SSKAAYLAAMILTGYDGEIKRWQPRDDITKYSIAPVEYQFLNKRRNVAGAPLFYWYQTLG CCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCHHHHHHHHHH LLGKL HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA