| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356593
Identifier: 119356593
GI number: 119356593
Start: 864329
End: 865144
Strand: Reverse
Name: 119356593
Synonym: Cpha266_0761
Alternate gene names: NA
Gene position: 865144-864329 (Counterclockwise)
Preceding gene: 119356594
Following gene: 119356592
Centisome position: 27.61
GC content: 45.96
Gene sequence:
>816_bases ATGAAAGACCTTTCAACCTGTATTCGCAATACCGCAGCTTTTATTTTCATACTTTTCGTTCTGTCTGCCGCAAACGTCGG CTGCAGTCCGGAGAAATCATCGCTGCCGCTCAGTTATGAGATGAAACGTATCGAGAAATTCTTCCATGAGGGAAAAACGA AGGAAGACCGCGAGTCATACTGCAAGTGCAACTACCCTGTTTTTTCCGGCAGAAAAAATGCCGAAGCGATCAACAACCAT CTGCAGCAATGGATTGCAGACAGTACTGCCATCGCTCCGGGAAAAAACTATACGGGAAGCAAGTCCATTGAAACGCTGTC CGATAATTTTCTGAAAGAATACGAACGCGTCAGAAAAGATTTTCCTGTTAACTGGCCTTACGTGTTCATGCTTGACGGCT CGGTTTTATTAAACAGATCCGGGTTGTTGAGTATCGATCTATCCAGTTATTCGTTTACCGGCGGGGCCCATGGCAGCAGC CACACAGAGTACTTCGTTTTCGATACCCTGTCGGGCGATCGGCTCAAGCTGAAAGATGTTTTTGAGGAGCGTTTTGAAAA TGCCCTGAACACGCTGATCGAAAAGCGTTACCGCGAGATGAAAGGCCTTTCTCCATCGGACAAGCTGAATGGAGAAAAAG GCGAGCTTTTCGAAAATTTCATCCATTTCAACAATAACTTCGCTCTTACCGATAAAGGGGTCAGCTTTTTATACAACCAG TATGAAATTGCAGCTCGTCCTGCAGGCACGATCGAAGTTGATCTTTCATACGGTGAACTGTCAGCTATCCTGAAACCCAG GTTCAGAGTTCTGTAG
Upstream 100 bases:
>100_bases GATTATTCAAATGTGCGACTCATAACAGAAGACGCCGGCAGAATTTTATGAAATCTGACTATAACGCTCTGTACGGTGCC GTTACAATCCTTGAACTGCC
Downstream 100 bases:
>100_bases GACAACCTTTCCGTTTTGCAGGCAGGGCGGCCTATCTGCCCTGCCTGCAGAAGCCTCGATCTAACTTGACTCTGCATGGC CCATGCATCCCAATGTGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKDLSTCIRNTAAFIFILFVLSAANVGCSPEKSSLPLSYEMKRIEKFFHEGKTKEDRESYCKCNYPVFSGRKNAEAINNH LQQWIADSTAIAPGKNYTGSKSIETLSDNFLKEYERVRKDFPVNWPYVFMLDGSVLLNRSGLLSIDLSSYSFTGGAHGSS HTEYFVFDTLSGDRLKLKDVFEERFENALNTLIEKRYREMKGLSPSDKLNGEKGELFENFIHFNNNFALTDKGVSFLYNQ YEIAARPAGTIEVDLSYGELSAILKPRFRVL
Sequences:
>Translated_271_residues MKDLSTCIRNTAAFIFILFVLSAANVGCSPEKSSLPLSYEMKRIEKFFHEGKTKEDRESYCKCNYPVFSGRKNAEAINNH LQQWIADSTAIAPGKNYTGSKSIETLSDNFLKEYERVRKDFPVNWPYVFMLDGSVLLNRSGLLSIDLSSYSFTGGAHGSS HTEYFVFDTLSGDRLKLKDVFEERFENALNTLIEKRYREMKGLSPSDKLNGEKGELFENFIHFNNNFALTDKGVSFLYNQ YEIAARPAGTIEVDLSYGELSAILKPRFRVL >Mature_271_residues MKDLSTCIRNTAAFIFILFVLSAANVGCSPEKSSLPLSYEMKRIEKFFHEGKTKEDRESYCKCNYPVFSGRKNAEAINNH LQQWIADSTAIAPGKNYTGSKSIETLSDNFLKEYERVRKDFPVNWPYVFMLDGSVLLNRSGLLSIDLSSYSFTGGAHGSS HTEYFVFDTLSGDRLKLKDVFEERFENALNTLIEKRYREMKGLSPSDKLNGEKGELFENFIHFNNNFALTDKGVSFLYNQ YEIAARPAGTIEVDLSYGELSAILKPRFRVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30841; Mature: 30841
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLSTCIRNTAAFIFILFVLSAANVGCSPEKSSLPLSYEMKRIEKFFHEGKTKEDRESY CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHH CKCNYPVFSGRKNAEAINNHLQQWIADSTAIAPGKNYTGSKSIETLSDNFLKEYERVRKD HCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC FPVNWPYVFMLDGSVLLNRSGLLSIDLSSYSFTGGAHGSSHTEYFVFDTLSGDRLKLKDV CCCCCCEEEEECCEEEECCCCEEEEEECCEEECCCCCCCCCCEEEEEECCCCCCCHHHHH FEERFENALNTLIEKRYREMKGLSPSDKLNGEKGELFENFIHFNNNFALTDKGVSFLYNQ HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHH YEIAARPAGTIEVDLSYGELSAILKPRFRVL HHEEECCCCEEEEEECHHHHHHHHCCHHHCC >Mature Secondary Structure MKDLSTCIRNTAAFIFILFVLSAANVGCSPEKSSLPLSYEMKRIEKFFHEGKTKEDRESY CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHH CKCNYPVFSGRKNAEAINNHLQQWIADSTAIAPGKNYTGSKSIETLSDNFLKEYERVRKD HCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC FPVNWPYVFMLDGSVLLNRSGLLSIDLSSYSFTGGAHGSSHTEYFVFDTLSGDRLKLKDV CCCCCCEEEEECCEEEECCCCEEEEEECCEEECCCCCCCCCCEEEEEECCCCCCCHHHHH FEERFENALNTLIEKRYREMKGLSPSDKLNGEKGELFENFIHFNNNFALTDKGVSFLYNQ HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHH YEIAARPAGTIEVDLSYGELSAILKPRFRVL HHEEECCCCEEEEEECHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA