| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356592
Identifier: 119356592
GI number: 119356592
Start: 861721
End: 862167
Strand: Reverse
Name: 119356592
Synonym: Cpha266_0759
Alternate gene names: NA
Gene position: 862167-861721 (Counterclockwise)
Preceding gene: 119356593
Following gene: 119356591
Centisome position: 27.51
GC content: 53.69
Gene sequence:
>447_bases ATGCCGGAAACCAAAGCTTCAGGCTCGTGCAATCCCGCTTGTACCAGTGTTATCAAGTTCATGACCGATCAGGAGATAGC TCCAGGCATGGGCCTCAGCATCCCTCCGTATTCCGAGGTGATCGGGTACAGTTACCTCAACATTTTCGTACGCTTCAACC AGGAAAAAAGCGATGAACCTCCGGTCGATCTCGGCGTCACCTTTGCTTTTGATGCCAACGGCAAAATGGCCGCACGCCGG TACGTGAACCTTGAGGAGAATGTGACCAGCCCGCAAAGCACCAATTTCATTGAAGTTTCAGGCAGGGCAAGCTGGCACGG CAACCCGCACAACGTCAGCACCTATATTACCCGCATACCCGTTATGGGGCCTTATGTGGAGGTGTTCGCCTACAACCGGG CGCCGGTCAAAAGAAGAGTTACCGTGTGGGGTTATCTGGTGTCCTGA
Upstream 100 bases:
>100_bases ATCCGGTTGTTGTGAATCACGCAGGAAGAGATTATTTTTCCGGTTCTTGCAATTCCTGTTTTTCGTTGTAACGTCACACC AACTTTAAACGGAGACTCCC
Downstream 100 bases:
>100_bases TTACGGGCACCTCTCTGTAATAAGCTATGACGAGGCCGGAGAGCTTCGTTGTTCCAGACGCATCGGAACTACCGGTTAAG TCGCGCTGAGGCTTTCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MPETKASGSCNPACTSVIKFMTDQEIAPGMGLSIPPYSEVIGYSYLNIFVRFNQEKSDEPPVDLGVTFAFDANGKMAARR YVNLEENVTSPQSTNFIEVSGRASWHGNPHNVSTYITRIPVMGPYVEVFAYNRAPVKRRVTVWGYLVS
Sequences:
>Translated_148_residues MPETKASGSCNPACTSVIKFMTDQEIAPGMGLSIPPYSEVIGYSYLNIFVRFNQEKSDEPPVDLGVTFAFDANGKMAARR YVNLEENVTSPQSTNFIEVSGRASWHGNPHNVSTYITRIPVMGPYVEVFAYNRAPVKRRVTVWGYLVS >Mature_147_residues PETKASGSCNPACTSVIKFMTDQEIAPGMGLSIPPYSEVIGYSYLNIFVRFNQEKSDEPPVDLGVTFAFDANGKMAARRY VNLEENVTSPQSTNFIEVSGRASWHGNPHNVSTYITRIPVMGPYVEVFAYNRAPVKRRVTVWGYLVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16447; Mature: 16316
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPETKASGSCNPACTSVIKFMTDQEIAPGMGLSIPPYSEVIGYSYLNIFVRFNQEKSDEP CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHEEEEEEEEECCCCCCCC PVDLGVTFAFDANGKMAARRYVNLEENVTSPQSTNFIEVSGRASWHGNPHNVSTYITRIP CCEEEEEEEECCCCCEEEHEECCCHHCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECC VMGPYVEVFAYNRAPVKRRVTVWGYLVS CCCCEEEEEEECCCCCEEEEEEEEEEEC >Mature Secondary Structure PETKASGSCNPACTSVIKFMTDQEIAPGMGLSIPPYSEVIGYSYLNIFVRFNQEKSDEP CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHEEEEEEEEECCCCCCCC PVDLGVTFAFDANGKMAARRYVNLEENVTSPQSTNFIEVSGRASWHGNPHNVSTYITRIP CCEEEEEEEECCCCCEEEHEECCCHHCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECC VMGPYVEVFAYNRAPVKRRVTVWGYLVS CCCCEEEEEEECCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA