| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356583
Identifier: 119356583
GI number: 119356583
Start: 852706
End: 853602
Strand: Direct
Name: 119356583
Synonym: Cpha266_0750
Alternate gene names: NA
Gene position: 852706-853602 (Clockwise)
Preceding gene: 119356582
Following gene: 119356584
Centisome position: 27.21
GC content: 51.84
Gene sequence:
>897_bases ATGCGAAAATCAGTTTATCGGCAGCGTGCGCTTTTCGCTTTTGTTTTGAGTTTACTCCTTCCTCTCATCTCAGGGTGTTG TCGTGCGAGGATGATTGCTGACTATCGGGCACCTGTAGCGAGTATTGCGGACACATCGAAAAATACGGCAACGCTTCCGG AGCGGACTCCTGTCGCCGGTCATAAGGAAAACCGGGTTTTACCAGTAGCCCGAAAGGTTCTTGTGCCTGATCTTGTCGGA AAAACAGTTGAGTCGGCAAAACGCATTCTCTACCACAAACAGCTTGCTTTGGGCAGCATTGTTTACCGCGAAAGCCTTGA ACAGGCAGGGATGGTTATTGCGCAAAACCCTGTACCGAAAAAGGGATTGCGGGTGGTCGAAGGTTCACCGGTCACTCTTG TTGTTTCCCGGTCAATGCTTGCCGTGGTTCCCGATGTCGTCGGGCGAACTGTTTTCGATGCCCGCCCGATTTTGCAAAAA GCCGGTTTTCTTACAGGATCGGTTGTTCCCGACTCCTTTGTTTCATCCGGCAAGGTGAGGCGACAACACCCAGTTGCAGG CGATTCGGCGCGAAGGGGATCGGCTGTCGATCTGACCGTAACAGGAGCTTCGCCTGAGCCGAAAGCACCTGAAGCGAATC AGGATCTTGTCACGTATCTTGCGGCAGCAATTGTGGCGACGGGCGGGGCTGCACTGTTATTGGGGCGACTACGGAGAAAT AATCTGCCGGGAAGAAAGCATAAAGCGGTGAGTGTTACTCCAAAAACAGATTTCGGGGTACAGGATATAATCGTTCCGTC CGGCGCTGTCGGGAAAAGAGAAACCGGAATCCGGTTTTTTCCGGACCAGGGTGTTCAGGAAATTGCTGTCAGGCAGGTTG ATGAAACAAAAGATTAA
Upstream 100 bases:
>100_bases AATAGGTGATCAGCAATAGCCGGGTTTTGCCCGTTACCATTTTCTCGATGGTCGGAAGGTATTCTTGTGTTTTTGCAATG CTTGATTTTTTTAGGATTGT
Downstream 100 bases:
>100_bases ACGCTCATGGATACCAGCAGCTATACGCTTCAGGATTTTTTTGGCCGGGGAAACATTGCCGGCACCAGACTTGAGGAGCT TCAGGCAGAAGAATCGATCA
Product: PASTA domain-containing protein
Products: NA
Alternate protein names: PASTA Domain-Containing Protein
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MRKSVYRQRALFAFVLSLLLPLISGCCRARMIADYRAPVASIADTSKNTATLPERTPVAGHKENRVLPVARKVLVPDLVG KTVESAKRILYHKQLALGSIVYRESLEQAGMVIAQNPVPKKGLRVVEGSPVTLVVSRSMLAVVPDVVGRTVFDARPILQK AGFLTGSVVPDSFVSSGKVRRQHPVAGDSARRGSAVDLTVTGASPEPKAPEANQDLVTYLAAAIVATGGAALLLGRLRRN NLPGRKHKAVSVTPKTDFGVQDIIVPSGAVGKRETGIRFFPDQGVQEIAVRQVDETKD
Sequences:
>Translated_298_residues MRKSVYRQRALFAFVLSLLLPLISGCCRARMIADYRAPVASIADTSKNTATLPERTPVAGHKENRVLPVARKVLVPDLVG KTVESAKRILYHKQLALGSIVYRESLEQAGMVIAQNPVPKKGLRVVEGSPVTLVVSRSMLAVVPDVVGRTVFDARPILQK AGFLTGSVVPDSFVSSGKVRRQHPVAGDSARRGSAVDLTVTGASPEPKAPEANQDLVTYLAAAIVATGGAALLLGRLRRN NLPGRKHKAVSVTPKTDFGVQDIIVPSGAVGKRETGIRFFPDQGVQEIAVRQVDETKD >Mature_298_residues MRKSVYRQRALFAFVLSLLLPLISGCCRARMIADYRAPVASIADTSKNTATLPERTPVAGHKENRVLPVARKVLVPDLVG KTVESAKRILYHKQLALGSIVYRESLEQAGMVIAQNPVPKKGLRVVEGSPVTLVVSRSMLAVVPDVVGRTVFDARPILQK AGFLTGSVVPDSFVSSGKVRRQHPVAGDSARRGSAVDLTVTGASPEPKAPEANQDLVTYLAAAIVATGGAALLLGRLRRN NLPGRKHKAVSVTPKTDFGVQDIIVPSGAVGKRETGIRFFPDQGVQEIAVRQVDETKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31924; Mature: 31924
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSVYRQRALFAFVLSLLLPLISGCCRARMIADYRAPVASIADTSKNTATLPERTPVAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCC HKENRVLPVARKVLVPDLVGKTVESAKRILYHKQLALGSIVYRESLEQAGMVIAQNPVPK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCC KGLRVVEGSPVTLVVSRSMLAVVPDVVGRTVFDARPILQKAGFLTGSVVPDSFVSSGKVR CCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCC RQHPVAGDSARRGSAVDLTVTGASPEPKAPEANQDLVTYLAAAIVATGGAALLLGRLRRN CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHC NLPGRKHKAVSVTPKTDFGVQDIIVPSGAVGKRETGIRFFPDQGVQEIAVRQVDETKD CCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MRKSVYRQRALFAFVLSLLLPLISGCCRARMIADYRAPVASIADTSKNTATLPERTPVAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCC HKENRVLPVARKVLVPDLVGKTVESAKRILYHKQLALGSIVYRESLEQAGMVIAQNPVPK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCC KGLRVVEGSPVTLVVSRSMLAVVPDVVGRTVFDARPILQKAGFLTGSVVPDSFVSSGKVR CCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCC RQHPVAGDSARRGSAVDLTVTGASPEPKAPEANQDLVTYLAAAIVATGGAALLLGRLRRN CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHC NLPGRKHKAVSVTPKTDFGVQDIIVPSGAVGKRETGIRFFPDQGVQEIAVRQVDETKD CCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA