| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is yiiP [C]
Identifier: 119356582
GI number: 119356582
Start: 851608
End: 852624
Strand: Direct
Name: yiiP [C]
Synonym: Cpha266_0749
Alternate gene names: 119356582
Gene position: 851608-852624 (Clockwise)
Preceding gene: 119356580
Following gene: 119356583
Centisome position: 27.17
GC content: 48.18
Gene sequence:
>1017_bases ATGCAGTTTTACCATCCGATCATGTCAACAGCGAAAAAAAGTTACAATTTTCAGAAAATCATCGCTGCAACCGGTGTCTT GCTGCTCATCATAAAATTTGGCGCCTGGTACCTTACGCACTCCGTAGCCATTCTTACCGATGCGCTTGAGAGTATCGTCA ATGTTACGAGCGGGTTCATTGGTCTTTACAGTCTGTATATTTCCGCCAAGCCGCGCGACAGCAGTCATCCATACGGTCAC GGTAAGGTCGAGTTCATATCCGCAGCTATCGAGGGTACGCTTATCTCTGTGGCCGGGTTGCTCATTATCAATGCGGCGGT TGATAATTTTATCCATCCGGGGGCCGTGGGACAACTCGATTACGGCATTCTTCTTGTCAGTATGACTGCGGCGATTAACT GGTTCGTTGGTTCGCTTGCTGTTCGAAACGGGAAGCGTAACGGCTCACTTGCCCTGATTGCAAGCGGCAGGCATCTTCAG TCGGACACCTGGTCAACAATCGGCATCATTGCCGGACTCGCTCTTCTTGCCCTGACGGGTTTGACCTGGCTCGACAGCGC TGTCGCGCTGATTTTTGCCGGAGTCATTCTTGTTACCGGATACAAGATATTGCGCAGTTCACTCAGTGGCATCATGGATG AAGCCGATACCGAACTGCTTGAAAAAATAGTGGCGCTGTTGCAGTCAAGCCGTCGTGAAAACTGGATTGACCTGCATAAT CTGAGAATCATCAAATATGGAAACGTGCTGCACCTCGATTGTCATCTGACGGTTCCCTGGTATCTGACGGTTCGTGAGTC CCAAAAGGAAATCAATAAACTTCAGAGGCTTATCAGAAAGAGTTTCGGCGAAAGTGTAGAGCTTTTTGTTCATACCGATG CATGCCTTAATTTTTCCTGCAGTATCTGTAAAAAAGCGGATTGCACGGTTCGCCAGGCTGATTTTGAGCATACGGTTGCC TTGACGGTTCAGAATATTTCAAGGGATTGCATGCACAAAATAGGTGATCAGCAATAG
Upstream 100 bases:
>100_bases TCGAAAGCTTTTGATCCGGTTGTCGGGCGCTCTCTGGCAATAATTTCTTATACTCAAGAGTCGCAAGGTTGTATTCAATT GATGGATATGATGCCTGCGC
Downstream 100 bases:
>100_bases CCGGGTTTTGCCCGTTACCATTTTCTCGATGGTCGGAAGGTATTCTTGTGTTTTTGCAATGCTTGATTTTTTTAGGATTG TATGCGAAAATCAGTTTATC
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MQFYHPIMSTAKKSYNFQKIIAATGVLLLIIKFGAWYLTHSVAILTDALESIVNVTSGFIGLYSLYISAKPRDSSHPYGH GKVEFISAAIEGTLISVAGLLIINAAVDNFIHPGAVGQLDYGILLVSMTAAINWFVGSLAVRNGKRNGSLALIASGRHLQ SDTWSTIGIIAGLALLALTGLTWLDSAVALIFAGVILVTGYKILRSSLSGIMDEADTELLEKIVALLQSSRRENWIDLHN LRIIKYGNVLHLDCHLTVPWYLTVRESQKEINKLQRLIRKSFGESVELFVHTDACLNFSCSICKKADCTVRQADFEHTVA LTVQNISRDCMHKIGDQQ
Sequences:
>Translated_338_residues MQFYHPIMSTAKKSYNFQKIIAATGVLLLIIKFGAWYLTHSVAILTDALESIVNVTSGFIGLYSLYISAKPRDSSHPYGH GKVEFISAAIEGTLISVAGLLIINAAVDNFIHPGAVGQLDYGILLVSMTAAINWFVGSLAVRNGKRNGSLALIASGRHLQ SDTWSTIGIIAGLALLALTGLTWLDSAVALIFAGVILVTGYKILRSSLSGIMDEADTELLEKIVALLQSSRRENWIDLHN LRIIKYGNVLHLDCHLTVPWYLTVRESQKEINKLQRLIRKSFGESVELFVHTDACLNFSCSICKKADCTVRQADFEHTVA LTVQNISRDCMHKIGDQQ >Mature_338_residues MQFYHPIMSTAKKSYNFQKIIAATGVLLLIIKFGAWYLTHSVAILTDALESIVNVTSGFIGLYSLYISAKPRDSSHPYGH GKVEFISAAIEGTLISVAGLLIINAAVDNFIHPGAVGQLDYGILLVSMTAAINWFVGSLAVRNGKRNGSLALIASGRHLQ SDTWSTIGIIAGLALLALTGLTWLDSAVALIFAGVILVTGYKILRSSLSGIMDEADTELLEKIVALLQSSRRENWIDLHN LRIIKYGNVLHLDCHLTVPWYLTVRESQKEINKLQRLIRKSFGESVELFVHTDACLNFSCSICKKADCTVRQADFEHTVA LTVQNISRDCMHKIGDQQ
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=281, Percent_Identity=27.0462633451957, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 37131; Mature: 37131
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFYHPIMSTAKKSYNFQKIIAATGVLLLIIKFGAWYLTHSVAILTDALESIVNVTSGFI CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLYSLYISAKPRDSSHPYGHGKVEFISAAIEGTLISVAGLLIINAAVDNFIHPGAVGQLD HHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH YGILLVSMTAAINWFVGSLAVRNGKRNGSLALIASGRHLQSDTWSTIGIIAGLALLALTG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH LTWLDSAVALIFAGVILVTGYKILRSSLSGIMDEADTELLEKIVALLQSSRRENWIDLHN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC LRIIKYGNVLHLDCHLTVPWYLTVRESQKEINKLQRLIRKSFGESVELFVHTDACLNFSC EEEEEECCEEEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCC SICKKADCTVRQADFEHTVALTVQNISRDCMHKIGDQQ HHCCCCCCCEECCCCCCEEEEEEHHHHHHHHHHCCCCC >Mature Secondary Structure MQFYHPIMSTAKKSYNFQKIIAATGVLLLIIKFGAWYLTHSVAILTDALESIVNVTSGFI CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLYSLYISAKPRDSSHPYGHGKVEFISAAIEGTLISVAGLLIINAAVDNFIHPGAVGQLD HHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH YGILLVSMTAAINWFVGSLAVRNGKRNGSLALIASGRHLQSDTWSTIGIIAGLALLALTG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH LTWLDSAVALIFAGVILVTGYKILRSSLSGIMDEADTELLEKIVALLQSSRRENWIDLHN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC LRIIKYGNVLHLDCHLTVPWYLTVRESQKEINKLQRLIRKSFGESVELFVHTDACLNFSC EEEEEECCEEEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCC SICKKADCTVRQADFEHTVALTVQNISRDCMHKIGDQQ HHCCCCCCCEECCCCCCEEEEEEHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]