Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is yiiP [C]

Identifier: 119356582

GI number: 119356582

Start: 851608

End: 852624

Strand: Direct

Name: yiiP [C]

Synonym: Cpha266_0749

Alternate gene names: 119356582

Gene position: 851608-852624 (Clockwise)

Preceding gene: 119356580

Following gene: 119356583

Centisome position: 27.17

GC content: 48.18

Gene sequence:

>1017_bases
ATGCAGTTTTACCATCCGATCATGTCAACAGCGAAAAAAAGTTACAATTTTCAGAAAATCATCGCTGCAACCGGTGTCTT
GCTGCTCATCATAAAATTTGGCGCCTGGTACCTTACGCACTCCGTAGCCATTCTTACCGATGCGCTTGAGAGTATCGTCA
ATGTTACGAGCGGGTTCATTGGTCTTTACAGTCTGTATATTTCCGCCAAGCCGCGCGACAGCAGTCATCCATACGGTCAC
GGTAAGGTCGAGTTCATATCCGCAGCTATCGAGGGTACGCTTATCTCTGTGGCCGGGTTGCTCATTATCAATGCGGCGGT
TGATAATTTTATCCATCCGGGGGCCGTGGGACAACTCGATTACGGCATTCTTCTTGTCAGTATGACTGCGGCGATTAACT
GGTTCGTTGGTTCGCTTGCTGTTCGAAACGGGAAGCGTAACGGCTCACTTGCCCTGATTGCAAGCGGCAGGCATCTTCAG
TCGGACACCTGGTCAACAATCGGCATCATTGCCGGACTCGCTCTTCTTGCCCTGACGGGTTTGACCTGGCTCGACAGCGC
TGTCGCGCTGATTTTTGCCGGAGTCATTCTTGTTACCGGATACAAGATATTGCGCAGTTCACTCAGTGGCATCATGGATG
AAGCCGATACCGAACTGCTTGAAAAAATAGTGGCGCTGTTGCAGTCAAGCCGTCGTGAAAACTGGATTGACCTGCATAAT
CTGAGAATCATCAAATATGGAAACGTGCTGCACCTCGATTGTCATCTGACGGTTCCCTGGTATCTGACGGTTCGTGAGTC
CCAAAAGGAAATCAATAAACTTCAGAGGCTTATCAGAAAGAGTTTCGGCGAAAGTGTAGAGCTTTTTGTTCATACCGATG
CATGCCTTAATTTTTCCTGCAGTATCTGTAAAAAAGCGGATTGCACGGTTCGCCAGGCTGATTTTGAGCATACGGTTGCC
TTGACGGTTCAGAATATTTCAAGGGATTGCATGCACAAAATAGGTGATCAGCAATAG

Upstream 100 bases:

>100_bases
TCGAAAGCTTTTGATCCGGTTGTCGGGCGCTCTCTGGCAATAATTTCTTATACTCAAGAGTCGCAAGGTTGTATTCAATT
GATGGATATGATGCCTGCGC

Downstream 100 bases:

>100_bases
CCGGGTTTTGCCCGTTACCATTTTCTCGATGGTCGGAAGGTATTCTTGTGTTTTTGCAATGCTTGATTTTTTTAGGATTG
TATGCGAAAATCAGTTTATC

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MQFYHPIMSTAKKSYNFQKIIAATGVLLLIIKFGAWYLTHSVAILTDALESIVNVTSGFIGLYSLYISAKPRDSSHPYGH
GKVEFISAAIEGTLISVAGLLIINAAVDNFIHPGAVGQLDYGILLVSMTAAINWFVGSLAVRNGKRNGSLALIASGRHLQ
SDTWSTIGIIAGLALLALTGLTWLDSAVALIFAGVILVTGYKILRSSLSGIMDEADTELLEKIVALLQSSRRENWIDLHN
LRIIKYGNVLHLDCHLTVPWYLTVRESQKEINKLQRLIRKSFGESVELFVHTDACLNFSCSICKKADCTVRQADFEHTVA
LTVQNISRDCMHKIGDQQ

Sequences:

>Translated_338_residues
MQFYHPIMSTAKKSYNFQKIIAATGVLLLIIKFGAWYLTHSVAILTDALESIVNVTSGFIGLYSLYISAKPRDSSHPYGH
GKVEFISAAIEGTLISVAGLLIINAAVDNFIHPGAVGQLDYGILLVSMTAAINWFVGSLAVRNGKRNGSLALIASGRHLQ
SDTWSTIGIIAGLALLALTGLTWLDSAVALIFAGVILVTGYKILRSSLSGIMDEADTELLEKIVALLQSSRRENWIDLHN
LRIIKYGNVLHLDCHLTVPWYLTVRESQKEINKLQRLIRKSFGESVELFVHTDACLNFSCSICKKADCTVRQADFEHTVA
LTVQNISRDCMHKIGDQQ
>Mature_338_residues
MQFYHPIMSTAKKSYNFQKIIAATGVLLLIIKFGAWYLTHSVAILTDALESIVNVTSGFIGLYSLYISAKPRDSSHPYGH
GKVEFISAAIEGTLISVAGLLIINAAVDNFIHPGAVGQLDYGILLVSMTAAINWFVGSLAVRNGKRNGSLALIASGRHLQ
SDTWSTIGIIAGLALLALTGLTWLDSAVALIFAGVILVTGYKILRSSLSGIMDEADTELLEKIVALLQSSRRENWIDLHN
LRIIKYGNVLHLDCHLTVPWYLTVRESQKEINKLQRLIRKSFGESVELFVHTDACLNFSCSICKKADCTVRQADFEHTVA
LTVQNISRDCMHKIGDQQ

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=281, Percent_Identity=27.0462633451957, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 37131; Mature: 37131

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFYHPIMSTAKKSYNFQKIIAATGVLLLIIKFGAWYLTHSVAILTDALESIVNVTSGFI
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLYSLYISAKPRDSSHPYGHGKVEFISAAIEGTLISVAGLLIINAAVDNFIHPGAVGQLD
HHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
YGILLVSMTAAINWFVGSLAVRNGKRNGSLALIASGRHLQSDTWSTIGIIAGLALLALTG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
LTWLDSAVALIFAGVILVTGYKILRSSLSGIMDEADTELLEKIVALLQSSRRENWIDLHN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
LRIIKYGNVLHLDCHLTVPWYLTVRESQKEINKLQRLIRKSFGESVELFVHTDACLNFSC
EEEEEECCEEEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCC
SICKKADCTVRQADFEHTVALTVQNISRDCMHKIGDQQ
HHCCCCCCCEECCCCCCEEEEEEHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQFYHPIMSTAKKSYNFQKIIAATGVLLLIIKFGAWYLTHSVAILTDALESIVNVTSGFI
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLYSLYISAKPRDSSHPYGHGKVEFISAAIEGTLISVAGLLIINAAVDNFIHPGAVGQLD
HHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
YGILLVSMTAAINWFVGSLAVRNGKRNGSLALIASGRHLQSDTWSTIGIIAGLALLALTG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
LTWLDSAVALIFAGVILVTGYKILRSSLSGIMDEADTELLEKIVALLQSSRRENWIDLHN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
LRIIKYGNVLHLDCHLTVPWYLTVRESQKEINKLQRLIRKSFGESVELFVHTDACLNFSC
EEEEEECCEEEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCC
SICKKADCTVRQADFEHTVALTVQNISRDCMHKIGDQQ
HHCCCCCCCEECCCCCCEEEEEEHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]