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The map label for this gene is glnB [C]

Identifier: 119356575

GI number: 119356575

Start: 844445

End: 844822

Strand: Reverse

Name: glnB [C]

Synonym: Cpha266_0742

Alternate gene names: 119356575

Gene position: 844822-844445 (Counterclockwise)

Preceding gene: 119356576

Following gene: 119356574

Centisome position: 26.96

GC content: 50.26

Gene sequence:

>378_bases
ATGAAAGAGATTATAGCTGTTATACGCATCAACAAGATGAACGAGACCAAACAGGCGCTCGTTGAAGCAGGAATCCCGGC
ATTTACGGCTACAGGCAGAGTGCTCGGACGAGGAAAAGGTCAGGTTCACTACGACATTCTTCATGGTGCCGAAGCCGGCC
ATCCTGAAGCTATCGCACAGCTTGGCAATGCTCCCAGGCTGGTATCGAAAAGGCTGCTTGCCCTTGTGGTTCCTGAAGAG
CTGTGCAAAACAGCCATTGACACCATCATCAAGGTCAATCAGACAGGAAAAGCCGGTGACGGCAAAATCTTTGTAACGCC
GATCCTTGAAACCATCAGGGTCAGAACAGGCGAAAAAGATGAACAGGCGCTGAACTGA

Upstream 100 bases:

>100_bases
GCGATGGAAAGATCTTTGTTTCGTCAGTCGAAGAGGTCTATACCATCAGCTCCGGCCAACAGGAAACCGAACTGAAGCTT
GCAGAAGCGAAGGAGGCTTG

Downstream 100 bases:

>100_bases
ACGGAGAACAATTTAACGGTGTAAACGGAGAGAGTGACATGCAGTCGTACAAAAATTTACCGGATCCATCCCTGGTCAGG
GAGGATCTGATACAGAAATA

Product: nitrogen regulatory protein P-II

Products: NA

Alternate protein names: ORF-125 [H]

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKEIIAVIRINKMNETKQALVEAGIPAFTATGRVLGRGKGQVHYDILHGAEAGHPEAIAQLGNAPRLVSKRLLALVVPEE
LCKTAIDTIIKVNQTGKAGDGKIFVTPILETIRVRTGEKDEQALN

Sequences:

>Translated_125_residues
MKEIIAVIRINKMNETKQALVEAGIPAFTATGRVLGRGKGQVHYDILHGAEAGHPEAIAQLGNAPRLVSKRLLALVVPEE
LCKTAIDTIIKVNQTGKAGDGKIFVTPILETIRVRTGEKDEQALN
>Mature_125_residues
MKEIIAVIRINKMNETKQALVEAGIPAFTATGRVLGRGKGQVHYDILHGAEAGHPEAIAQLGNAPRLVSKRLLALVVPEE
LCKTAIDTIIKVNQTGKAGDGKIFVTPILETIRVRTGEKDEQALN

Specific function: Could be involved in the regulation of nitrogen fixation [H]

COG id: COG0347

COG function: function code E; Nitrogen regulatory protein PII

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the P(II) protein family [H]

Homologues:

Organism=Escherichia coli, GI1788904, Length=124, Percent_Identity=38.7096774193548, Blast_Score=83, Evalue=4e-18,
Organism=Escherichia coli, GI1786655, Length=124, Percent_Identity=33.0645161290323, Blast_Score=63, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002187
- InterPro:   IPR011322
- InterPro:   IPR015867
- InterPro:   IPR017918 [H]

Pfam domain/function: PF00543 P-II [H]

EC number: NA

Molecular weight: Translated: 13460; Mature: 13460

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS00638 PII_GLNB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIIAVIRINKMNETKQALVEAGIPAFTATGRVLGRGKGQVHYDILHGAEAGHPEAIAQ
CCHHEEEEEECCCCHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCHHHHHH
LGNAPRLVSKRLLALVVPEELCKTAIDTIIKVNQTGKAGDGKIFVTPILETIRVRTGEKD
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHCCCCCC
EQALN
CCCCC
>Mature Secondary Structure
MKEIIAVIRINKMNETKQALVEAGIPAFTATGRVLGRGKGQVHYDILHGAEAGHPEAIAQ
CCHHEEEEEECCCCHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCHHHHHH
LGNAPRLVSKRLLALVVPEELCKTAIDTIIKVNQTGKAGDGKIFVTPILETIRVRTGEKD
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHCCCCCC
EQALN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2068380; 7961410 [H]