| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is thiG
Identifier: 119356564
GI number: 119356564
Start: 831344
End: 832123
Strand: Reverse
Name: thiG
Synonym: Cpha266_0730
Alternate gene names: 119356564
Gene position: 832123-831344 (Counterclockwise)
Preceding gene: 119356565
Following gene: 119356563
Centisome position: 26.55
GC content: 54.1
Gene sequence:
>780_bases ATGGACTTTTTGCACTTGGGATCCTTTGTTTTTTCTTCCCGCCTGATTCTTGGAACAGGCAAATTCAGCAATGCCGACCT CATGATTGAGGCAATAAAAGCTTCAGGGGCACAACTTGTCACCGTGGCGCTGCGACGATTCAACCGTGAGCAGATTGCCG ATGATCTTTTCGGGCCGCTTTCCGCCTTGCAGGGAATTACGCTTATGCCGAACACTTCGGGAGCCTCGACCGCCAGGGAA GCCATCCATGCGGCCCATATAGCAAGAGAGCTTTCCGGCAGCCCGTTTATCAAGGTAGAGATTCATCCCAACCCGCAGCA CCTTATGCCCGATGCTCTTGAAACCTGGGAGGCTTCAAGAATTCTCGCAAAGGAAGGATTTCTTGTCATGCCCTACATCC CTGCAGATCCGGTGCTTGCAAAAAGACTTGAGGAGGTTGGTTGTGCCTCAGTCATGCCGCTCGGTTCGGCAATCGGGAGC GGTCAGGGGCTGGCAAACGCAGGGATGATCGAACTGATCATCAGGGAGAGCGGCATTCCTGTTATTGTCGATGCAGGACT CAGAGCTCCTTCCGAAGCGGCGGCAGCCATGGAAATGGGTTGCGGAGCCGTGCTGGTGAACAGTGCCGTAGCCGTTGCCG GAAACCCTCCTGAAATGGCAAATGCCTTTGCCGAAGCCGTAAGAGCCGGACGCAGGGCATTCAAGGCAGAGCTGATGCCG AAAAGCAGCTTCGCTCTTTCGACAAGCCCGCTAACAACTTTTCTCGGAAAGAAATCATGA
Upstream 100 bases:
>100_bases CCCGAAAATCGTTCCTTACATCTTCTCATGGAAGGAGATCGTGTCGAAATTCTGGTTTTTGCAGGCGGAGGGTAAACGAC GTCAGTAATAAAAAAGAGTT
Downstream 100 bases:
>100_bases ACAGCTTGCCTGAATGGCTGACCAGTGAAGAGAACTCCCGGCAACTTGCCGCAATGCTTGCTCCATCATCATCTTTCAGT CTTGAAGCCCTTGCTGCTGA
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MDFLHLGSFVFSSRLILGTGKFSNADLMIEAIKASGAQLVTVALRRFNREQIADDLFGPLSALQGITLMPNTSGASTARE AIHAAHIARELSGSPFIKVEIHPNPQHLMPDALETWEASRILAKEGFLVMPYIPADPVLAKRLEEVGCASVMPLGSAIGS GQGLANAGMIELIIRESGIPVIVDAGLRAPSEAAAAMEMGCGAVLVNSAVAVAGNPPEMANAFAEAVRAGRRAFKAELMP KSSFALSTSPLTTFLGKKS
Sequences:
>Translated_259_residues MDFLHLGSFVFSSRLILGTGKFSNADLMIEAIKASGAQLVTVALRRFNREQIADDLFGPLSALQGITLMPNTSGASTARE AIHAAHIARELSGSPFIKVEIHPNPQHLMPDALETWEASRILAKEGFLVMPYIPADPVLAKRLEEVGCASVMPLGSAIGS GQGLANAGMIELIIRESGIPVIVDAGLRAPSEAAAAMEMGCGAVLVNSAVAVAGNPPEMANAFAEAVRAGRRAFKAELMP KSSFALSTSPLTTFLGKKS >Mature_259_residues MDFLHLGSFVFSSRLILGTGKFSNADLMIEAIKASGAQLVTVALRRFNREQIADDLFGPLSALQGITLMPNTSGASTARE AIHAAHIARELSGSPFIKVEIHPNPQHLMPDALETWEASRILAKEGFLVMPYIPADPVLAKRLEEVGCASVMPLGSAIGS GQGLANAGMIELIIRESGIPVIVDAGLRAPSEAAAAMEMGCGAVLVNSAVAVAGNPPEMANAFAEAVRAGRRAFKAELMP KSSFALSTSPLTTFLGKKS
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family
Homologues:
Organism=Escherichia coli, GI48994993, Length=253, Percent_Identity=54.5454545454545, Blast_Score=268, Evalue=3e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIG_CHLPD (A1BEF7)
Other databases:
- EMBL: CP000492 - RefSeq: YP_911208.1 - ProteinModelPortal: A1BEF7 - SMR: A1BEF7 - STRING: A1BEF7 - GeneID: 4569924 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_0730 - NMPDR: fig|290317.7.peg.769 - eggNOG: COG2022 - HOGENOM: HBG296821 - OMA: VAIRRTN - ProtClustDB: PRK00208 - GO: GO:0005737 - HAMAP: MF_00443 - InterPro: IPR013785 - InterPro: IPR008867 - Gene3D: G3DSA:3.20.20.70
Pfam domain/function: PF05690 ThiG; SSF110399 ThiG
EC number: NA
Molecular weight: Translated: 27151; Mature: 27151
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: ACT_SITE 98-98 BINDING 159-159
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFLHLGSFVFSSRLILGTGKFSNADLMIEAIKASGAQLVTVALRRFNREQIADDLFGPL CCHHHHHHHHHHCEEEEECCCCCCCHHEEEEHHCCCCHHHHHHHHHCCHHHHHHHHHHHH SALQGITLMPNTSGASTAREAIHAAHIARELSGSPFIKVEIHPNPQHLMPDALETWEASR HHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHCCCHHHHHHHHHH ILAKEGFLVMPYIPADPVLAKRLEEVGCASVMPLGSAIGSGQGLANAGMIELIIRESGIP HHHHCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC VIVDAGLRAPSEAAAAMEMGCGAVLVNSAVAVAGNPPEMANAFAEAVRAGRRAFKAELMP EEEECCCCCCHHHHHHHHHCCCCEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC KSSFALSTSPLTTFLGKKS CCCCEECCCHHHHHHCCCC >Mature Secondary Structure MDFLHLGSFVFSSRLILGTGKFSNADLMIEAIKASGAQLVTVALRRFNREQIADDLFGPL CCHHHHHHHHHHCEEEEECCCCCCCHHEEEEHHCCCCHHHHHHHHHCCHHHHHHHHHHHH SALQGITLMPNTSGASTAREAIHAAHIARELSGSPFIKVEIHPNPQHLMPDALETWEASR HHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHCCCHHHHHHHHHH ILAKEGFLVMPYIPADPVLAKRLEEVGCASVMPLGSAIGSGQGLANAGMIELIIRESGIP HHHHCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC VIVDAGLRAPSEAAAAMEMGCGAVLVNSAVAVAGNPPEMANAFAEAVRAGRRAFKAELMP EEEECCCCCCHHHHHHHHHCCCCEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC KSSFALSTSPLTTFLGKKS CCCCEECCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA