| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356565
Identifier: 119356565
GI number: 119356565
Start: 832149
End: 832352
Strand: Reverse
Name: 119356565
Synonym: Cpha266_0731
Alternate gene names: NA
Gene position: 832352-832149 (Counterclockwise)
Preceding gene: 119356566
Following gene: 119356564
Centisome position: 26.56
GC content: 43.14
Gene sequence:
>204_bases ATGATTACTATTGAACTCAATGGAGAAAACTACACAATACCGCGAGGATCTTCAGTTTCCGATCTTCTCAAGGAGATAGG CTCTGATGGTAAAACCGTCGCTGTTGTGGTCAATGAACTAATTATCCGTCCCGAAAATCGTTCCTTACATCTTCTCATGG AAGGAGATCGTGTCGAAATTCTGGTTTTTGCAGGCGGAGGGTAA
Upstream 100 bases:
>100_bases CCCGACAGGTCGGGACAAACAAAGCAATCGGGATGCACAATATCTTTTTTGGACTACCCATAAATTCGACAAGAAAGAAA TCGTTAGGAAATCGTCACAA
Downstream 100 bases:
>100_bases ACGACGTCAGTAATAAAAAAGAGTTATGGACTTTTTGCACTTGGGATCCTTTGTTTTTTCTTCCCGCCTGATTCTTGGAA CAGGCAAATTCAGCAATGCC
Product: thiamine biosynthesis protein ThiS
Products: NA
Alternate protein names: ThiS Thiamine-Biosynthesis; ThiS Protein
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MITIELNGENYTIPRGSSVSDLLKEIGSDGKTVAVVVNELIIRPENRSLHLLMEGDRVEILVFAGGG
Sequences:
>Translated_67_residues MITIELNGENYTIPRGSSVSDLLKEIGSDGKTVAVVVNELIIRPENRSLHLLMEGDRVEILVFAGGG >Mature_67_residues MITIELNGENYTIPRGSSVSDLLKEIGSDGKTVAVVVNELIIRPENRSLHLLMEGDRVEILVFAGGG
Specific function: Unknown
COG id: COG2104
COG function: function code H; Sulfur transfer protein involved in thiamine biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7237; Mature: 7237
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITIELNGENYTIPRGSSVSDLLKEIGSDGKTVAVVVNELIIRPENRSLHLLMEGDRVEI CEEEEECCCEEEECCCCCHHHHHHHHCCCCCEEEEEEEEEEECCCCCCEEEEEECCCEEE LVFAGGG EEEECCC >Mature Secondary Structure MITIELNGENYTIPRGSSVSDLLKEIGSDGKTVAVVVNELIIRPENRSLHLLMEGDRVEI CEEEEECCCEEEECCCCCHHHHHHHHCCCCCEEEEEEEEEEECCCCCCEEEEEECCCEEE LVFAGGG EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA