Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119356552

Identifier: 119356552

GI number: 119356552

Start: 819658

End: 820533

Strand: Reverse

Name: 119356552

Synonym: Cpha266_0718

Alternate gene names: NA

Gene position: 820533-819658 (Counterclockwise)

Preceding gene: 119356553

Following gene: 119356549

Centisome position: 26.18

GC content: 48.06

Gene sequence:

>876_bases
ATGAAACACAAAAGCATGATATGCCGGCTGCTCACCGTAACTGCAGCGCTCACCATCTCATCATTGCAGAACGCAACTGC
CGACCCGCTGCTCGACCCGACATTCAATACGCTCTTCAAACCGCTCATGGCAGATCCAACAGAACCCAGAATAGCTGTCA
TGCCATGGCTCAATGACAACTATCTGCAACTCGACATAGGAACATCCGTAGATCTCTACCAGAACGACAAAAAAGATTTC
GCTGTCGGGGTTGATTTTGGAACCTATTCGCTTCTCGAACGCGGTGACAATTTTAAATTTCCCGTCGATACCATCGATTA
CATGTTCGGCATTAACGCAACATGGAAAAAAAATATCGCATCAGACAGCTTCCCCTTTGATGAGCTCAGCGCACGAGTAA
GGCTCAGTCATATCTCGGCTCACTTTGAAGATGGACACTTTGACAATGAAACAAACCAGTGGATCCAGGGAGACTGCCCG
TTTGAAATTCCATTCACCTACAGCAGAGAATTCGTCAACGCCGTTGTGGCACTCAGCTCACCGGACAAACGAATCTATGC
CGGATACCAGTACATCTATCATACCAGTCCGGGCAACATAAGTCCGCACTCTTTTCAGGCCGGAGTTGAAATTGGCCGAC
CGGATAACATCTATGCCGCACTCGATTATAAACTGCTGCCGATCTGGGATGAAAGCAGAAATGAAAGTCAGGGATACCGG
GGAACACTGAATCTTCAGGCAGGAACAAGACTGGGATTTATCGGACTTGACGGCGTTCGGCTTGCCTACAACTACTTTAA
CGGTATGAGCCGGCAAGGAATGTATTTCTATCGGGATGAAAGCTACAGCTCACTCGGCATGATCATCGACCTGTAA

Upstream 100 bases:

>100_bases
AGGTAACCAATGGCATTGCAGTCCGAATGGCTGTTCTGCAAACGCTGCTTGCAGAGTGATTTTTAATTTTTTCATCAAAC
CAAACCAAAACAGAACGGTC

Downstream 100 bases:

>100_bases
ATCCTCATCAAAAAATCTTGCCGCTCCCACATTGGAACAAAAGGGTCCGACTCGCACACCGGACCCTTTGTAATCCACTC
CCACAACTTAACGATTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MKHKSMICRLLTVTAALTISSLQNATADPLLDPTFNTLFKPLMADPTEPRIAVMPWLNDNYLQLDIGTSVDLYQNDKKDF
AVGVDFGTYSLLERGDNFKFPVDTIDYMFGINATWKKNIASDSFPFDELSARVRLSHISAHFEDGHFDNETNQWIQGDCP
FEIPFTYSREFVNAVVALSSPDKRIYAGYQYIYHTSPGNISPHSFQAGVEIGRPDNIYAALDYKLLPIWDESRNESQGYR
GTLNLQAGTRLGFIGLDGVRLAYNYFNGMSRQGMYFYRDESYSSLGMIIDL

Sequences:

>Translated_291_residues
MKHKSMICRLLTVTAALTISSLQNATADPLLDPTFNTLFKPLMADPTEPRIAVMPWLNDNYLQLDIGTSVDLYQNDKKDF
AVGVDFGTYSLLERGDNFKFPVDTIDYMFGINATWKKNIASDSFPFDELSARVRLSHISAHFEDGHFDNETNQWIQGDCP
FEIPFTYSREFVNAVVALSSPDKRIYAGYQYIYHTSPGNISPHSFQAGVEIGRPDNIYAALDYKLLPIWDESRNESQGYR
GTLNLQAGTRLGFIGLDGVRLAYNYFNGMSRQGMYFYRDESYSSLGMIIDL
>Mature_291_residues
MKHKSMICRLLTVTAALTISSLQNATADPLLDPTFNTLFKPLMADPTEPRIAVMPWLNDNYLQLDIGTSVDLYQNDKKDF
AVGVDFGTYSLLERGDNFKFPVDTIDYMFGINATWKKNIASDSFPFDELSARVRLSHISAHFEDGHFDNETNQWIQGDCP
FEIPFTYSREFVNAVVALSSPDKRIYAGYQYIYHTSPGNISPHSFQAGVEIGRPDNIYAALDYKLLPIWDESRNESQGYR
GTLNLQAGTRLGFIGLDGVRLAYNYFNGMSRQGMYFYRDESYSSLGMIIDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33013; Mature: 33013

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKSMICRLLTVTAALTISSLQNATADPLLDPTFNTLFKPLMADPTEPRIAVMPWLNDN
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCC
YLQLDIGTSVDLYQNDKKDFAVGVDFGTYSLLERGDNFKFPVDTIDYMFGINATWKKNIA
EEEEEECCEEEEEECCCCCEEEEECCCHHHHHHCCCCCCCCHHHHHHHHCCCCHHHCCCC
SDSFPFDELSARVRLSHISAHFEDGHFDNETNQWIQGDCPFEIPFTYSREFVNAVVALSS
CCCCCHHHHHHHEEEEEHEEECCCCCCCCCCCCEECCCCCEECCCCHHHHHHEEEEEECC
PDKRIYAGYQYIYHTSPGNISPHSFQAGVEIGRPDNIYAALDYKLLPIWDESRNESQGYR
CCCEEEEEEEEEEECCCCCCCCCCEECCEEECCCCCEEEEEEEEEEEEECCCCCCCCCCE
GTLNLQAGTRLGFIGLDGVRLAYNYFNGMSRQGMYFYRDESYSSLGMIIDL
EEEEECCCCEEEEEECCCCEEEEHHHCCCCCCCEEEEECCCCCCCEEEEEC
>Mature Secondary Structure
MKHKSMICRLLTVTAALTISSLQNATADPLLDPTFNTLFKPLMADPTEPRIAVMPWLNDN
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCC
YLQLDIGTSVDLYQNDKKDFAVGVDFGTYSLLERGDNFKFPVDTIDYMFGINATWKKNIA
EEEEEECCEEEEEECCCCCEEEEECCCHHHHHHCCCCCCCCHHHHHHHHCCCCHHHCCCC
SDSFPFDELSARVRLSHISAHFEDGHFDNETNQWIQGDCPFEIPFTYSREFVNAVVALSS
CCCCCHHHHHHHEEEEEHEEECCCCCCCCCCCCEECCCCCEECCCCHHHHHHEEEEEECC
PDKRIYAGYQYIYHTSPGNISPHSFQAGVEIGRPDNIYAALDYKLLPIWDESRNESQGYR
CCCEEEEEEEEEEECCCCCCCCCCEECCEEECCCCCEEEEEEEEEEEEECCCCCCCCCCE
GTLNLQAGTRLGFIGLDGVRLAYNYFNGMSRQGMYFYRDESYSSLGMIIDL
EEEEECCCCEEEEEECCCCEEEEHHHCCCCCCCEEEEECCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA