Click here to switch to the map view.

The map label for this gene is uspF [C]

Identifier: 119356548

GI number: 119356548

Start: 813638

End: 814075

Strand: Reverse

Name: uspF [C]

Synonym: Cpha266_0713

Alternate gene names: 119356548

Gene position: 814075-813638 (Counterclockwise)

Preceding gene: 119356549

Following gene: 119356547

Centisome position: 25.98

GC content: 47.72

Gene sequence:

>438_bases
ATGATTACCATCAAAAAAATCATCTGTCCGGTTGATTTTTCGGGTTTATCGCGCAAGGCGCTGAGCTATGCCAATGAGTT
TGCGAAACTTTCCGGTGGGGAGGTTTTTCTTGTCGGCGTCGTGGAAAATGATCCGACGATCAACTACTCTCACGGACTGG
AAACGGAGCGTGCGGAAGAAGAGAAAAAACTTGCAGCCCTGATCGAGGAAGAACAGATGCACGGCATCGTTGCCGATTAT
GTCATTTACGAAGGATTTGCCGAAGAGTGCATTCTCGATTATGCAAAGCGCAAGGAGGCAGACATTATCATCATGGGATC
TCACGGTCGTCGCGGCTTGAAAAGAATGATCCTTGGCAGTGTAGCCGAACATGTCATCAGACGAGCTCCCTGCCCTGTTC
TTGTGATAAAGGAAAACGAGCACGAGTTCATTAAGTAA

Upstream 100 bases:

>100_bases
ACGTTAGCCCCTGACAGAGAAAATAACAGCTTTTCCTGCATGACACTGTCCGGCATGGGTTGTTATATGTTTTCATTAAC
CAAAACACAACGACTGAGCT

Downstream 100 bases:

>100_bases
ATCCGCTTGCTGCAGAGAGCAGCTTCACACAGTTTTTTCAACACTATTTCCGTTTAACAATCAAGGAGAAGATGTATGGC
AAAAAATGTCTCAAACGTCT

Product: UspA domain-containing protein

Products: NA

Alternate protein names: USP MJ0531 [H]

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MITIKKIICPVDFSGLSRKALSYANEFAKLSGGEVFLVGVVENDPTINYSHGLETERAEEEKKLAALIEEEQMHGIVADY
VIYEGFAEECILDYAKRKEADIIIMGSHGRRGLKRMILGSVAEHVIRRAPCPVLVIKENEHEFIK

Sequences:

>Translated_145_residues
MITIKKIICPVDFSGLSRKALSYANEFAKLSGGEVFLVGVVENDPTINYSHGLETERAEEEKKLAALIEEEQMHGIVADY
VIYEGFAEECILDYAKRKEADIIIMGSHGRRGLKRMILGSVAEHVIRRAPCPVLVIKENEHEFIK
>Mature_145_residues
MITIKKIICPVDFSGLSRKALSYANEFAKLSGGEVFLVGVVENDPTINYSHGLETERAEEEKKLAALIEEEQMHGIVADY
VIYEGFAEECILDYAKRKEADIIIMGSHGRRGLKRMILGSVAEHVIRRAPCPVLVIKENEHEFIK

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 16290; Mature: 16290

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIKKIICPVDFSGLSRKALSYANEFAKLSGGEVFLVGVVENDPTINYSHGLETERAEE
CEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCHHHHH
EKKLAALIEEEQMHGIVADYVIYEGFAEECILDYAKRKEADIIIMGSHGRRGLKRMILGS
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHH
VAEHVIRRAPCPVLVIKENEHEFIK
HHHHHHHHCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MITIKKIICPVDFSGLSRKALSYANEFAKLSGGEVFLVGVVENDPTINYSHGLETERAEE
CEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCHHHHH
EKKLAALIEEEQMHGIVADYVIYEGFAEECILDYAKRKEADIIIMGSHGRRGLKRMILGS
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHH
VAEHVIRRAPCPVLVIKENEHEFIK
HHHHHHHHCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]