| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is proP [H]
Identifier: 119356547
GI number: 119356547
Start: 811985
End: 813562
Strand: Reverse
Name: proP [H]
Synonym: Cpha266_0712
Alternate gene names: 119356547
Gene position: 813562-811985 (Counterclockwise)
Preceding gene: 119356548
Following gene: 119356546
Centisome position: 25.96
GC content: 49.62
Gene sequence:
>1578_bases ATGGCAAAAAATGTCTCAAACGTCTCCCAAAACGAAGAGGTAACCAGCATCAGGAGGGTTATTACCGCATCCTCCGTTGG TACGCTCATCGAATGGTATGACTTTTACATTTTCGGAAGTCTTGCAAAGATTATTTCCGAGCAATTCTTTCCAAAGGACA ACCCGACAGCCGCGCTGCTTGCCACCCTCGCTACCTTTGCGGCAGGTTTTGTGGTGCGACCTTTCGGCGCGCTGTTTTTC GGTCGCCTCGGTGACCTGATCGGAAGAAAATACACCTTTCTGGTAACACTCATCATCATGGGTGGATCAACCTTTGCCAT AGGCCTGGTTCCCGGTTACAAAACGATCGGGTTTGTAGCTCCGGCAATCGTCTTTGTTTTGAGACTGCTCCAGGGTCTTG CCCTCGGAGGCGAATACGGCGGTGCGGCAACCTATGTTGCTGAACACTCTCCGTCTGATAAACGTGGCTTCTGGACAAGC TTCATTCAGACAACTGCCACCATCGGTCTGTTTGTCTCTCTTGGCGTTATTCTCATTGTCCGCCAAACGCTTGGTGTCGA AACCTTTACCGACTGGGGCTGGAGAATTCCGTTCCTTCTCTCGATTTTTCTTGTTGCCATTTCAGTGTACATCCGCATGA AAATGTCGGAATCCCCTGCATTTGCAAAACTGAAAAAAGAGGGAAAAACCTCAACCAACCCTCTTGCCGAGAGCTTCAAG AAAAAAGACAACCTGAAAATGGTTCTGCTTGCACTGCTTGGCGCGACGGCTGGTCAGGGTGTGGTCTGGTACACCGGACA GTTCTATGCGCTCTCTTTTCTTCAGAACGCCTGTAATGTGGAGTTTGTGCAGAGCAACTACATCATCTCCATAGCGCTGC TCATCGGAACACCGTTCTTTATCATTTTCGGAGCACTTTCCGACAAGATCGGGCGCAAGTACATCATGATGACCGGCATG CTGATTGCCGTGGTAGCGTACAGACCTATCTATACCGTCATGTACGAAGAAGCCAATCTCAAGGCCAAAACCGAAATCAA GGAGAAGACAACAACAGAGGTGGCGCTGGCACTGAAAGGGGCTGATTCCGTAAAAACAACCATAACAAAGAAAACCTTCG AAGACGGAACAACCTACAAGGAGACCAAAAAGGAAACAACCCCTGTTGATCTCGAAAAGAAAGCCGAGCTGGCCGCTGCC GGCAAGCTGAAACCTGAAACCAAGAAGGAAACAACCCTTTCAGAGAGTTCATACTATAAAATGATCGGACTTGTGCTTAT TCAGGTTCTTTTCGTCACCATGGTTTACGGCCCGATTGCCGCGTTCCTTGTCGAGTTGTTCCCGACCAGGATACGTTACA CCTCCATGTCGCTACCTTATCACATTGGTAACGGCGTGTTCGGCGGTCTTGTTCCGCTTATTTCAACCCGACTTGTCGAA GCGACCCGTCCCGGTCCTGATCTGCCGCCTGCCGACCCGCTTGCCGGTCTATGGTATCCTATCATTATTGGCGCGGTATG CTTCCTTATCGGCTCGATCTATATTTCGGGCAAAACCAATAACCTGGACATCGACTAA
Upstream 100 bases:
>100_bases AAACGAGCACGAGTTCATTAAGTAAATCCGCTTGCTGCAGAGAGCAGCTTCACACAGTTTTTTCAACACTATTTCCGTTT AACAATCAAGGAGAAGATGT
Downstream 100 bases:
>100_bases TCAAGAACCATTAAACTCTATTTAATTATGTCTGCAATTAAAAAGGTTGCCGGAATACTCTGGGCACTCATGGGCGCAGG GATCATTCCGCTGGCGATCA
Product: major facilitator transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 525; Mature: 524
Protein sequence:
>525_residues MAKNVSNVSQNEEVTSIRRVITASSVGTLIEWYDFYIFGSLAKIISEQFFPKDNPTAALLATLATFAAGFVVRPFGALFF GRLGDLIGRKYTFLVTLIIMGGSTFAIGLVPGYKTIGFVAPAIVFVLRLLQGLALGGEYGGAATYVAEHSPSDKRGFWTS FIQTTATIGLFVSLGVILIVRQTLGVETFTDWGWRIPFLLSIFLVAISVYIRMKMSESPAFAKLKKEGKTSTNPLAESFK KKDNLKMVLLALLGATAGQGVVWYTGQFYALSFLQNACNVEFVQSNYIISIALLIGTPFFIIFGALSDKIGRKYIMMTGM LIAVVAYRPIYTVMYEEANLKAKTEIKEKTTTEVALALKGADSVKTTITKKTFEDGTTYKETKKETTPVDLEKKAELAAA GKLKPETKKETTLSESSYYKMIGLVLIQVLFVTMVYGPIAAFLVELFPTRIRYTSMSLPYHIGNGVFGGLVPLISTRLVE ATRPGPDLPPADPLAGLWYPIIIGAVCFLIGSIYISGKTNNLDID
Sequences:
>Translated_525_residues MAKNVSNVSQNEEVTSIRRVITASSVGTLIEWYDFYIFGSLAKIISEQFFPKDNPTAALLATLATFAAGFVVRPFGALFF GRLGDLIGRKYTFLVTLIIMGGSTFAIGLVPGYKTIGFVAPAIVFVLRLLQGLALGGEYGGAATYVAEHSPSDKRGFWTS FIQTTATIGLFVSLGVILIVRQTLGVETFTDWGWRIPFLLSIFLVAISVYIRMKMSESPAFAKLKKEGKTSTNPLAESFK KKDNLKMVLLALLGATAGQGVVWYTGQFYALSFLQNACNVEFVQSNYIISIALLIGTPFFIIFGALSDKIGRKYIMMTGM LIAVVAYRPIYTVMYEEANLKAKTEIKEKTTTEVALALKGADSVKTTITKKTFEDGTTYKETKKETTPVDLEKKAELAAA GKLKPETKKETTLSESSYYKMIGLVLIQVLFVTMVYGPIAAFLVELFPTRIRYTSMSLPYHIGNGVFGGLVPLISTRLVE ATRPGPDLPPADPLAGLWYPIIIGAVCFLIGSIYISGKTNNLDID >Mature_524_residues AKNVSNVSQNEEVTSIRRVITASSVGTLIEWYDFYIFGSLAKIISEQFFPKDNPTAALLATLATFAAGFVVRPFGALFFG RLGDLIGRKYTFLVTLIIMGGSTFAIGLVPGYKTIGFVAPAIVFVLRLLQGLALGGEYGGAATYVAEHSPSDKRGFWTSF IQTTATIGLFVSLGVILIVRQTLGVETFTDWGWRIPFLLSIFLVAISVYIRMKMSESPAFAKLKKEGKTSTNPLAESFKK KDNLKMVLLALLGATAGQGVVWYTGQFYALSFLQNACNVEFVQSNYIISIALLIGTPFFIIFGALSDKIGRKYIMMTGML IAVVAYRPIYTVMYEEANLKAKTEIKEKTTTEVALALKGADSVKTTITKKTFEDGTTYKETKKETTPVDLEKKAELAAAG KLKPETKKETTLSESSYYKMIGLVLIQVLFVTMVYGPIAAFLVELFPTRIRYTSMSLPYHIGNGVFGGLVPLISTRLVEA TRPGPDLPPADPLAGLWYPIIIGAVCFLIGSIYISGKTNNLDID
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=317, Percent_Identity=36.2776025236593, Blast_Score=214, Evalue=2e-56, Organism=Escherichia coli, GI1788292, Length=334, Percent_Identity=32.0359281437126, Blast_Score=186, Evalue=5e-48, Organism=Escherichia coli, GI1789941, Length=342, Percent_Identity=37.4269005847953, Blast_Score=179, Evalue=6e-46, Organism=Escherichia coli, GI1788942, Length=334, Percent_Identity=33.8323353293413, Blast_Score=171, Evalue=1e-43, Organism=Escherichia coli, GI87082231, Length=335, Percent_Identity=24.1791044776119, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI87082404, Length=325, Percent_Identity=23.0769230769231, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 57414; Mature: 57283
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNVSNVSQNEEVTSIRRVITASSVGTLIEWYDFYIFGSLAKIISEQFFPKDNPTAALL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH ATLATFAAGFVVRPFGALFFGRLGDLIGRKYTFLVTLIIMGGSTFAIGLVPGYKTIGFVA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH PAIVFVLRLLQGLALGGEYGGAATYVAEHSPSDKRGFWTSFIQTTATIGLFVSLGVILIV HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RQTLGVETFTDWGWRIPFLLSIFLVAISVYIRMKMSESPAFAKLKKEGKTSTNPLAESFK HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCHHHHHHH KKDNLKMVLLALLGATAGQGVVWYTGQFYALSFLQNACNVEFVQSNYIISIALLIGTPFF CCCCHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCEEEEECCCCEEEHHHHCCHHH IIFGALSDKIGRKYIMMTGMLIAVVAYRPIYTVMYEEANLKAKTEIKEKTTTEVALALKG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHEEECC ADSVKTTITKKTFEDGTTYKETKKETTPVDLEKKAELAAAGKLKPETKKETTLSESSYYK CCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCHHHHHH MIGLVLIQVLFVTMVYGPIAAFLVELFPTRIRYTSMSLPYHIGNGVFGGLVPLISTRLVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEECCCCHHHHHHHHHHHHHHH ATRPGPDLPPADPLAGLWYPIIIGAVCFLIGSIYISGKTNNLDID CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC >Mature Secondary Structure AKNVSNVSQNEEVTSIRRVITASSVGTLIEWYDFYIFGSLAKIISEQFFPKDNPTAALL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH ATLATFAAGFVVRPFGALFFGRLGDLIGRKYTFLVTLIIMGGSTFAIGLVPGYKTIGFVA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH PAIVFVLRLLQGLALGGEYGGAATYVAEHSPSDKRGFWTSFIQTTATIGLFVSLGVILIV HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RQTLGVETFTDWGWRIPFLLSIFLVAISVYIRMKMSESPAFAKLKKEGKTSTNPLAESFK HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCHHHHHHH KKDNLKMVLLALLGATAGQGVVWYTGQFYALSFLQNACNVEFVQSNYIISIALLIGTPFF CCCCHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCEEEEECCCCEEEHHHHCCHHH IIFGALSDKIGRKYIMMTGMLIAVVAYRPIYTVMYEEANLKAKTEIKEKTTTEVALALKG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHEEECC ADSVKTTITKKTFEDGTTYKETKKETTPVDLEKKAELAAAGKLKPETKKETTLSESSYYK CCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCHHHHHH MIGLVLIQVLFVTMVYGPIAAFLVELFPTRIRYTSMSLPYHIGNGVFGGLVPLISTRLVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEECCCCHHHHHHHHHHHHHHH ATRPGPDLPPADPLAGLWYPIIIGAVCFLIGSIYISGKTNNLDID CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]