| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356540
Identifier: 119356540
GI number: 119356540
Start: 805090
End: 805770
Strand: Reverse
Name: 119356540
Synonym: Cpha266_0705
Alternate gene names: NA
Gene position: 805770-805090 (Counterclockwise)
Preceding gene: 119356541
Following gene: 119356539
Centisome position: 25.71
GC content: 48.46
Gene sequence:
>681_bases ATGACAGAAATTAAACCCGATACCCTGAAGCAGCAGCCTGTTAAAGAAAAACTCGTCGATCAGTTGCTCTACATCGTCAT CAAATACAAAACCGCCCTTATTATTACCCTTGCGCTCATCATCACGGCTGGAGCCGGAATCTTTTTCTGGATTCGCTATC AGGATACAAGTGAAAAGGAAGCGGCATTACACCTTTCGCGTATAGCGCCACTGGTCGATCTCGGTCAGTATCGTGCGGCG ATAGACGGTGACAGCAAGATTCCAGGTTTAAAGAAAATCGATGAGAAGTATGGTCATGTACTGAGTGGCAAAATGGCTGG TCTCCTGCTTGCCAATACCTACTACGCACTCCGGCAGCCGGACTCTGCCCTCACGGTATTCAACAGACTCTCGTTTAAAA ACAAGGATCTCTCCGCTGCGGCACTTGCCGGTTCCGGAGATTGCTATACGGAAAAAAAGCAGTTTGACAATGCGGCGAAA GCGTACGAAAAGGCAGCGGAAACCGCCGAAAACTCAACGCTCAAGGCGCAGTACCTTGCCAGTGCAGCAGACAGTTATCT GGCAACAAAAGACGTAAAAAAAGCATCCGATTTCTACACCAGAATCATTGCCGACTATCCCGGCTCAACCGGAGCGATAC TTTCACAAAGAGCACTGTGGCAGATTTCAGGACAACAGTAA
Upstream 100 bases:
>100_bases AATTTTCAGGATTAAACCGGAAAATCAACAAGAAAACCGATCCGCTCCCGAAAACACATATTCCCCGGCAACATCACCGG AAAGCAACCAACGAATCATG
Downstream 100 bases:
>100_bases TCACGTTCAACATTTTTCAAACATTCCCATGCCCGACACATTTACCATTCAGACAAGCCTTGGAGATATAACGATCAGGC TTTACGACGATACTCCGCTT
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: TPR Repeat; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide TPR_2 Repeat-Containing Protein
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MTEIKPDTLKQQPVKEKLVDQLLYIVIKYKTALIITLALIITAGAGIFFWIRYQDTSEKEAALHLSRIAPLVDLGQYRAA IDGDSKIPGLKKIDEKYGHVLSGKMAGLLLANTYYALRQPDSALTVFNRLSFKNKDLSAAALAGSGDCYTEKKQFDNAAK AYEKAAETAENSTLKAQYLASAADSYLATKDVKKASDFYTRIIADYPGSTGAILSQRALWQISGQQ
Sequences:
>Translated_226_residues MTEIKPDTLKQQPVKEKLVDQLLYIVIKYKTALIITLALIITAGAGIFFWIRYQDTSEKEAALHLSRIAPLVDLGQYRAA IDGDSKIPGLKKIDEKYGHVLSGKMAGLLLANTYYALRQPDSALTVFNRLSFKNKDLSAAALAGSGDCYTEKKQFDNAAK AYEKAAETAENSTLKAQYLASAADSYLATKDVKKASDFYTRIIADYPGSTGAILSQRALWQISGQQ >Mature_225_residues TEIKPDTLKQQPVKEKLVDQLLYIVIKYKTALIITLALIITAGAGIFFWIRYQDTSEKEAALHLSRIAPLVDLGQYRAAI DGDSKIPGLKKIDEKYGHVLSGKMAGLLLANTYYALRQPDSALTVFNRLSFKNKDLSAAALAGSGDCYTEKKQFDNAAKA YEKAAETAENSTLKAQYLASAADSYLATKDVKKASDFYTRIIADYPGSTGAILSQRALWQISGQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24825; Mature: 24693
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEIKPDTLKQQPVKEKLVDQLLYIVIKYKTALIITLALIITAGAGIFFWIRYQDTSEKE CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHH AALHLSRIAPLVDLGQYRAAIDGDSKIPGLKKIDEKYGHVLSGKMAGLLLANTYYALRQP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DSALTVFNRLSFKNKDLSAAALAGSGDCYTEKKQFDNAAKAYEKAAETAENSTLKAQYLA CHHHHHHHHHHCCCCCCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SAADSYLATKDVKKASDFYTRIIADYPGSTGAILSQRALWQISGQQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEECCCC >Mature Secondary Structure TEIKPDTLKQQPVKEKLVDQLLYIVIKYKTALIITLALIITAGAGIFFWIRYQDTSEKE CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHH AALHLSRIAPLVDLGQYRAAIDGDSKIPGLKKIDEKYGHVLSGKMAGLLLANTYYALRQP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DSALTVFNRLSFKNKDLSAAALAGSGDCYTEKKQFDNAAKAYEKAAETAENSTLKAQYLA CHHHHHHHHHHCCCCCCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SAADSYLATKDVKKASDFYTRIIADYPGSTGAILSQRALWQISGQQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA