Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119356540

Identifier: 119356540

GI number: 119356540

Start: 805090

End: 805770

Strand: Reverse

Name: 119356540

Synonym: Cpha266_0705

Alternate gene names: NA

Gene position: 805770-805090 (Counterclockwise)

Preceding gene: 119356541

Following gene: 119356539

Centisome position: 25.71

GC content: 48.46

Gene sequence:

>681_bases
ATGACAGAAATTAAACCCGATACCCTGAAGCAGCAGCCTGTTAAAGAAAAACTCGTCGATCAGTTGCTCTACATCGTCAT
CAAATACAAAACCGCCCTTATTATTACCCTTGCGCTCATCATCACGGCTGGAGCCGGAATCTTTTTCTGGATTCGCTATC
AGGATACAAGTGAAAAGGAAGCGGCATTACACCTTTCGCGTATAGCGCCACTGGTCGATCTCGGTCAGTATCGTGCGGCG
ATAGACGGTGACAGCAAGATTCCAGGTTTAAAGAAAATCGATGAGAAGTATGGTCATGTACTGAGTGGCAAAATGGCTGG
TCTCCTGCTTGCCAATACCTACTACGCACTCCGGCAGCCGGACTCTGCCCTCACGGTATTCAACAGACTCTCGTTTAAAA
ACAAGGATCTCTCCGCTGCGGCACTTGCCGGTTCCGGAGATTGCTATACGGAAAAAAAGCAGTTTGACAATGCGGCGAAA
GCGTACGAAAAGGCAGCGGAAACCGCCGAAAACTCAACGCTCAAGGCGCAGTACCTTGCCAGTGCAGCAGACAGTTATCT
GGCAACAAAAGACGTAAAAAAAGCATCCGATTTCTACACCAGAATCATTGCCGACTATCCCGGCTCAACCGGAGCGATAC
TTTCACAAAGAGCACTGTGGCAGATTTCAGGACAACAGTAA

Upstream 100 bases:

>100_bases
AATTTTCAGGATTAAACCGGAAAATCAACAAGAAAACCGATCCGCTCCCGAAAACACATATTCCCCGGCAACATCACCGG
AAAGCAACCAACGAATCATG

Downstream 100 bases:

>100_bases
TCACGTTCAACATTTTTCAAACATTCCCATGCCCGACACATTTACCATTCAGACAAGCCTTGGAGATATAACGATCAGGC
TTTACGACGATACTCCGCTT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Repeat; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide TPR_2 Repeat-Containing Protein

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTEIKPDTLKQQPVKEKLVDQLLYIVIKYKTALIITLALIITAGAGIFFWIRYQDTSEKEAALHLSRIAPLVDLGQYRAA
IDGDSKIPGLKKIDEKYGHVLSGKMAGLLLANTYYALRQPDSALTVFNRLSFKNKDLSAAALAGSGDCYTEKKQFDNAAK
AYEKAAETAENSTLKAQYLASAADSYLATKDVKKASDFYTRIIADYPGSTGAILSQRALWQISGQQ

Sequences:

>Translated_226_residues
MTEIKPDTLKQQPVKEKLVDQLLYIVIKYKTALIITLALIITAGAGIFFWIRYQDTSEKEAALHLSRIAPLVDLGQYRAA
IDGDSKIPGLKKIDEKYGHVLSGKMAGLLLANTYYALRQPDSALTVFNRLSFKNKDLSAAALAGSGDCYTEKKQFDNAAK
AYEKAAETAENSTLKAQYLASAADSYLATKDVKKASDFYTRIIADYPGSTGAILSQRALWQISGQQ
>Mature_225_residues
TEIKPDTLKQQPVKEKLVDQLLYIVIKYKTALIITLALIITAGAGIFFWIRYQDTSEKEAALHLSRIAPLVDLGQYRAAI
DGDSKIPGLKKIDEKYGHVLSGKMAGLLLANTYYALRQPDSALTVFNRLSFKNKDLSAAALAGSGDCYTEKKQFDNAAKA
YEKAAETAENSTLKAQYLASAADSYLATKDVKKASDFYTRIIADYPGSTGAILSQRALWQISGQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24825; Mature: 24693

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIKPDTLKQQPVKEKLVDQLLYIVIKYKTALIITLALIITAGAGIFFWIRYQDTSEKE
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHH
AALHLSRIAPLVDLGQYRAAIDGDSKIPGLKKIDEKYGHVLSGKMAGLLLANTYYALRQP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DSALTVFNRLSFKNKDLSAAALAGSGDCYTEKKQFDNAAKAYEKAAETAENSTLKAQYLA
CHHHHHHHHHHCCCCCCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SAADSYLATKDVKKASDFYTRIIADYPGSTGAILSQRALWQISGQQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEECCCC
>Mature Secondary Structure 
TEIKPDTLKQQPVKEKLVDQLLYIVIKYKTALIITLALIITAGAGIFFWIRYQDTSEKE
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHH
AALHLSRIAPLVDLGQYRAAIDGDSKIPGLKKIDEKYGHVLSGKMAGLLLANTYYALRQP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DSALTVFNRLSFKNKDLSAAALAGSGDCYTEKKQFDNAAKAYEKAAETAENSTLKAQYLA
CHHHHHHHHHHCCCCCCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SAADSYLATKDVKKASDFYTRIIADYPGSTGAILSQRALWQISGQQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA