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The map label for this gene is arnC [H]

Identifier: 119356524

GI number: 119356524

Start: 787397

End: 788335

Strand: Reverse

Name: arnC [H]

Synonym: Cpha266_0689

Alternate gene names: 119356524

Gene position: 788335-787397 (Counterclockwise)

Preceding gene: 119356525

Following gene: 119356523

Centisome position: 25.16

GC content: 48.03

Gene sequence:

>939_bases
GTGACCATCAAACTCTCGGTAGTCATTCCGGTCATGAACGAAGAAAAGAGCATCAAACCGCTGTTCGATGCTCTTGCGGC
TGCACTCGGATCGGTTGATCACGAGATCATTCTTGTCGATGACGGCTCAACGGATGGTACCGTTGCCGAAATAGAGGCTT
TTGCCCCTCCGAACGCCCGGCTCGTTGTCCTGAACAAGAACTATGGCCAGACAACCGCCATGGCGGCAGGTATCGACAGT
GCTCACGGTGAACTGATTGCCACCCTTGACGGCGACCTGCAGAATGACCCGGGAGATATTCCCATGATGATGAGCTATCT
GTACGACCATGATCTCGATGTGATTGCAGGAAGAAGAGCGAACAGAAAGGACGGCATGGTGCTGAGAAAAATTCCAAGCG
CCATTGCAAACGCGATCATCCGAAACATCACCGGTGTGCATATCCATGATTACGGCTGCACGCTGAAAATCTTTAAAAAA
GATGTCGCAAAAAATCTCGGTCTTTACGGAGAACTGCACCGGTTTATTCCCGTACTTGTTCAGCTTTACGGAGCAAAAAT
GGAAGAGGTTGACGTTCGCCACCACCCGAGGCAGTTCGGAGAGTCGAAATATGGTATAGGCAGAACCTTCAAGGTGCTGA
GTGATCTGTTGTTCATGGTTTTTTTCCAGAAGTACAGCCAAAAACCAATGCACCTGTTTGGCACCCTTGGTTTTTCAACC
CTGTTTTTAGGTCTTGCCATCAACCTTTATCTGGTCGCCCTGAAAATTCTCGGCCATGAAATCGGCGGCAGACCACTTTT
AACTCTTGGCGTGATTCTTACCTTTATCGGAATTCAGTTGATTACCACCGGGTTTATTGCCGAGTTCATCATGCGCACCT
ACTACGAATCACAGAACAAAAAACCCTATATCATCAAAAAGATCGTTGGCAAAGATTAA

Upstream 100 bases:

>100_bases
TCGTGCTTACAACCGTCAAATACCTTCCAGGGTTTGACAATCCTGATGTACTCTACCAGAAGCACGGCATTGTACTGGTA
AACAATAAATAAACGATTCC

Downstream 100 bases:

>100_bases
CTCCCGCACGATAAAGCTGCTCAAGACACTGATTCAGCTTCTTGTCACCTGTCTGGCACTTTTTCTTGTCCTGACCAAAA
CTGATATAGCACAACTTGCC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTIKLSVVIPVMNEEKSIKPLFDALAAALGSVDHEIILVDDGSTDGTVAEIEAFAPPNARLVVLNKNYGQTTAMAAGIDS
AHGELIATLDGDLQNDPGDIPMMMSYLYDHDLDVIAGRRANRKDGMVLRKIPSAIANAIIRNITGVHIHDYGCTLKIFKK
DVAKNLGLYGELHRFIPVLVQLYGAKMEEVDVRHHPRQFGESKYGIGRTFKVLSDLLFMVFFQKYSQKPMHLFGTLGFST
LFLGLAINLYLVALKILGHEIGGRPLLTLGVILTFIGIQLITTGFIAEFIMRTYYESQNKKPYIIKKIVGKD

Sequences:

>Translated_312_residues
MTIKLSVVIPVMNEEKSIKPLFDALAAALGSVDHEIILVDDGSTDGTVAEIEAFAPPNARLVVLNKNYGQTTAMAAGIDS
AHGELIATLDGDLQNDPGDIPMMMSYLYDHDLDVIAGRRANRKDGMVLRKIPSAIANAIIRNITGVHIHDYGCTLKIFKK
DVAKNLGLYGELHRFIPVLVQLYGAKMEEVDVRHHPRQFGESKYGIGRTFKVLSDLLFMVFFQKYSQKPMHLFGTLGFST
LFLGLAINLYLVALKILGHEIGGRPLLTLGVILTFIGIQLITTGFIAEFIMRTYYESQNKKPYIIKKIVGKD
>Mature_311_residues
TIKLSVVIPVMNEEKSIKPLFDALAAALGSVDHEIILVDDGSTDGTVAEIEAFAPPNARLVVLNKNYGQTTAMAAGIDSA
HGELIATLDGDLQNDPGDIPMMMSYLYDHDLDVIAGRRANRKDGMVLRKIPSAIANAIIRNITGVHIHDYGCTLKIFKKD
VAKNLGLYGELHRFIPVLVQLYGAKMEEVDVRHHPRQFGESKYGIGRTFKVLSDLLFMVFFQKYSQKPMHLFGTLGFSTL
FLGLAINLYLVALKILGHEIGGRPLLTLGVILTFIGIQLITTGFIAEFIMRTYYESQNKKPYIIKKIVGKD

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788588, Length=313, Percent_Identity=34.185303514377, Blast_Score=178, Evalue=4e-46,
Organism=Escherichia coli, GI1788692, Length=312, Percent_Identity=27.2435897435897, Blast_Score=113, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71999402, Length=234, Percent_Identity=26.4957264957265, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6325441, Length=153, Percent_Identity=32.6797385620915, Blast_Score=82, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 34537; Mature: 34406

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKLSVVIPVMNEEKSIKPLFDALAAALGSVDHEIILVDDGSTDGTVAEIEAFAPPNAR
CEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCE
LVVLNKNYGQTTAMAAGIDSAHGELIATLDGDLQNDPGDIPMMMSYLYDHDLDVIAGRRA
EEEEECCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCHHCCCCCC
NRKDGMVLRKIPSAIANAIIRNITGVHIHDYGCTLKIFKKDVAKNLGLYGELHRFIPVLV
CCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
QLYGAKMEEVDVRHHPRQFGESKYGIGRTFKVLSDLLFMVFFQKYSQKPMHLFGTLGFST
HHHCCCHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LFLGLAINLYLVALKILGHEIGGRPLLTLGVILTFIGIQLITTGFIAEFIMRTYYESQNK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KPYIIKKIVGKD
CCEEHHHHCCCC
>Mature Secondary Structure 
TIKLSVVIPVMNEEKSIKPLFDALAAALGSVDHEIILVDDGSTDGTVAEIEAFAPPNAR
EEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCE
LVVLNKNYGQTTAMAAGIDSAHGELIATLDGDLQNDPGDIPMMMSYLYDHDLDVIAGRRA
EEEEECCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCHHCCCCCC
NRKDGMVLRKIPSAIANAIIRNITGVHIHDYGCTLKIFKKDVAKNLGLYGELHRFIPVLV
CCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
QLYGAKMEEVDVRHHPRQFGESKYGIGRTFKVLSDLLFMVFFQKYSQKPMHLFGTLGFST
HHHCCCHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LFLGLAINLYLVALKILGHEIGGRPLLTLGVILTFIGIQLITTGFIAEFIMRTYYESQNK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KPYIIKKIVGKD
CCEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA