| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is purH [H]
Identifier: 119356492
GI number: 119356492
Start: 748982
End: 750547
Strand: Direct
Name: purH [H]
Synonym: Cpha266_0657
Alternate gene names: 119356492
Gene position: 748982-750547 (Clockwise)
Preceding gene: 119356489
Following gene: 119356494
Centisome position: 23.9
GC content: 50.26
Gene sequence:
>1566_bases ATGTCTGATCCTGTCATCAAACGGGCGCTGGTCTCTGTTTCCGACAAAACCGGTATTGTGGATTTCTGCCGGGAGCTTTC GCTTCTCGGCGTTGAGGTGTTTTCAACGGGCGGAACCCTGAAGACTCTTCAGGATGCCGGAATAGCTGCGGCTTCTATTT CGACCATCACCGGATTTCCGGAAATTATGGATGGGCGGGTCAAAACCCTCCATCCTAAAATACATGGAGGACTGCTCGCC GTAAGGGAAAATCCTGATCATGTCAACCAGGCGAACGAAAACGGGATCAGCTTTATTGATCTTGTTGTTGTTAACCTTTA TCCATTCGAGGCCACAGTTGCAAAACCGGACGTGACCTTCGAGGATGCCATAGAAAATATCGATATCGGCGGTCCCTCCA TGCTTCGCAGTGCTGCCAAGAACAACGAATCGGTAACAGTGGTCACGGATAGCGCCGACTATGCGCTTGTGTTGCAGGAG ATGCGTAATAATAACGGTGCGACGAAAAGGGAGACCCGGCTGGCGCTTGCTCTGAAGGTTTTTGAACTTACCTCTCGTTA TGATCGCGCAATCGCCTCTTATCTTGCAGGAGCTCAGCATGAAGCAGATTCTTCCATGACGGTAAAACTTGAACGTGAGC TCGATATGCGCTATGGCGAAAATCCTCATCAGAGCGCTGGGCTTTACCGCCTGACTGATGAGAACGGAACGCGTTCTTTT AGCGATTATTTCGAGAAACTGCATGGCAAGGAGCTCTCTTACAACAATATGCTCGATATTGCCGCCGCAGTCTCCCTTAT TGAGGAGTTCCGTGGTGAAGAGCCGACAGTAGTCATTATCAAACATACAAACCCCTGCGGTGTTGCGCAGGCCCCGACAC TTGCCGAAGCATACCGGAGAGCATTCTCAACCGATACCCAGGCCCCTTTTGGCGGCATTATTGCCTTTAACCATCCTCTC GACATGGAAGCGGCAACGGCGGTCAATGAGATTTTTACCGAGATTCTTATTGCTCCGGCATTTGAGGATGGCGTGCTTGA GATGCTGATGAAGAAAAAAGATCGCAGGCTTGTGCGGCAGACGAGTGCCCTGCCCAAAGGTGGTTGGGAGTTCAAGTCTA CTCCGTTCGGGATGCTTGTTCAGGAACGTGACAGCAAAATCGTCACAAAAGAGGATCTGACTGTTGTGACCAAACGGCAG CCAACAGAAGAGGAGGTTGCAGACATGATGTTTGCCTGGAAAATCTGCAAGCACATCAAGTCAAACACGATTCTTTATGT TAAAAATCGCCAGACCTTTGGAGTTGGTGCCGGTCAGATGTCCCGTGTTGACTCTTCAAAAATCGCGCGTTGGAAAGCTT CTGAAGTCAATCTCGATCTGCATGGCTCGGTGGTTGCTTCAGATGCGTTTTTCCCGTTTGCCGATGGTCTTCTTGCCGCA GCAGAAGCAGGCGTTACCGCAGTTATTCAGCCAGGCGGTTCGATCAGGGATAACGAGGTGATTGAAGCGGCAGACGCTAA CAATCTTGCCATGGTTTTTACAGGAATGCGCCACTTCAAACACTGA
Upstream 100 bases:
>100_bases GCTGTTTATTGCGTATTGTTGTCGCCTGAAATAATTGGTGATATTTTCTTAAATTCCGGCTTTAGAATCTGCGACTTAAC GACAAATAAACTCTTTGCAA
Downstream 100 bases:
>100_bases GGGCTTTCTCGATCAATACGTGAGTAATTCTGAAAAAAGGCGTACCGATGGTGCGCCTTTTTTTGTTGCTGCTTTATGGT TTTATTTCGGTTCTGTTCAT
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MSDPVIKRALVSVSDKTGIVDFCRELSLLGVEVFSTGGTLKTLQDAGIAAASISTITGFPEIMDGRVKTLHPKIHGGLLA VRENPDHVNQANENGISFIDLVVVNLYPFEATVAKPDVTFEDAIENIDIGGPSMLRSAAKNNESVTVVTDSADYALVLQE MRNNNGATKRETRLALALKVFELTSRYDRAIASYLAGAQHEADSSMTVKLERELDMRYGENPHQSAGLYRLTDENGTRSF SDYFEKLHGKELSYNNMLDIAAAVSLIEEFRGEEPTVVIIKHTNPCGVAQAPTLAEAYRRAFSTDTQAPFGGIIAFNHPL DMEAATAVNEIFTEILIAPAFEDGVLEMLMKKKDRRLVRQTSALPKGGWEFKSTPFGMLVQERDSKIVTKEDLTVVTKRQ PTEEEVADMMFAWKICKHIKSNTILYVKNRQTFGVGAGQMSRVDSSKIARWKASEVNLDLHGSVVASDAFFPFADGLLAA AEAGVTAVIQPGGSIRDNEVIEAADANNLAMVFTGMRHFKH
Sequences:
>Translated_521_residues MSDPVIKRALVSVSDKTGIVDFCRELSLLGVEVFSTGGTLKTLQDAGIAAASISTITGFPEIMDGRVKTLHPKIHGGLLA VRENPDHVNQANENGISFIDLVVVNLYPFEATVAKPDVTFEDAIENIDIGGPSMLRSAAKNNESVTVVTDSADYALVLQE MRNNNGATKRETRLALALKVFELTSRYDRAIASYLAGAQHEADSSMTVKLERELDMRYGENPHQSAGLYRLTDENGTRSF SDYFEKLHGKELSYNNMLDIAAAVSLIEEFRGEEPTVVIIKHTNPCGVAQAPTLAEAYRRAFSTDTQAPFGGIIAFNHPL DMEAATAVNEIFTEILIAPAFEDGVLEMLMKKKDRRLVRQTSALPKGGWEFKSTPFGMLVQERDSKIVTKEDLTVVTKRQ PTEEEVADMMFAWKICKHIKSNTILYVKNRQTFGVGAGQMSRVDSSKIARWKASEVNLDLHGSVVASDAFFPFADGLLAA AEAGVTAVIQPGGSIRDNEVIEAADANNLAMVFTGMRHFKH >Mature_520_residues SDPVIKRALVSVSDKTGIVDFCRELSLLGVEVFSTGGTLKTLQDAGIAAASISTITGFPEIMDGRVKTLHPKIHGGLLAV RENPDHVNQANENGISFIDLVVVNLYPFEATVAKPDVTFEDAIENIDIGGPSMLRSAAKNNESVTVVTDSADYALVLQEM RNNNGATKRETRLALALKVFELTSRYDRAIASYLAGAQHEADSSMTVKLERELDMRYGENPHQSAGLYRLTDENGTRSFS DYFEKLHGKELSYNNMLDIAAAVSLIEEFRGEEPTVVIIKHTNPCGVAQAPTLAEAYRRAFSTDTQAPFGGIIAFNHPLD MEAATAVNEIFTEILIAPAFEDGVLEMLMKKKDRRLVRQTSALPKGGWEFKSTPFGMLVQERDSKIVTKEDLTVVTKRQP TEEEVADMMFAWKICKHIKSNTILYVKNRQTFGVGAGQMSRVDSSKIARWKASEVNLDLHGSVVASDAFFPFADGLLAAA EAGVTAVIQPGGSIRDNEVIEAADANNLAMVFTGMRHFKH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=492, Percent_Identity=36.7886178861789, Blast_Score=265, Evalue=8e-71, Organism=Escherichia coli, GI1790439, Length=531, Percent_Identity=49.9058380414313, Blast_Score=501, Evalue=1e-143, Organism=Caenorhabditis elegans, GI71985564, Length=516, Percent_Identity=32.9457364341085, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI71985574, Length=346, Percent_Identity=26.878612716763, Blast_Score=90, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6323056, Length=484, Percent_Identity=33.4710743801653, Blast_Score=239, Evalue=7e-64, Organism=Saccharomyces cerevisiae, GI6323768, Length=485, Percent_Identity=33.6082474226804, Blast_Score=239, Evalue=1e-63, Organism=Drosophila melanogaster, GI24649832, Length=489, Percent_Identity=36.8098159509202, Blast_Score=269, Evalue=3e-72,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 57053; Mature: 56922
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPVIKRALVSVSDKTGIVDFCRELSLLGVEVFSTGGTLKTLQDAGIAAASISTITGFP CCCHHHHHHHHHCCCCCCHHHHHHHHHHHCEEEECCCCCHHHHHHCCCCHHHHHHHCCCH EIMDGRVKTLHPKIHGGLLAVRENPDHVNQANENGISFIDLVVVNLYPFEATVAKPDVTF HHHCCCCEEECCCCCCCEEEEECCCCHHCCCCCCCCEEEEEEEEEEECCEEEECCCCCCH EDAIENIDIGGPSMLRSAAKNNESVTVVTDSADYALVLQEMRNNNGATKRETRLALALKV HHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH FELTSRYDRAIASYLAGAQHEADSSMTVKLERELDMRYGENPHQSAGLYRLTDENGTRSF HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHCCCCCCCCCCEEEEECCCCCCHH SDYFEKLHGKELSYNNMLDIAAAVSLIEEFRGEEPTVVIIKHTNPCGVAQAPTLAEAYRR HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHH AFSTDTQAPFGGIIAFNHPLDMEAATAVNEIFTEILIAPAFEDGVLEMLMKKKDRRLVRQ HHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH TSALPKGGWEFKSTPFGMLVQERDSKIVTKEDLTVVTKRQPTEEEVADMMFAWKICKHIK HHCCCCCCCCCCCCCCCCEEECCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHC SNTILYVKNRQTFGVGAGQMSRVDSSKIARWKASEVNLDLHGSVVASDAFFPFADGLLAA CCEEEEEECCCEECCCCCHHHHCCHHHHHEEECCEECEEECCCEEECCCCCHHHHHHHHH AEAGVTAVIQPGGSIRDNEVIEAADANNLAMVFTGMRHFKH HHCCCEEEECCCCCCCCCCEEEECCCCCEEEEEECHHHHCC >Mature Secondary Structure SDPVIKRALVSVSDKTGIVDFCRELSLLGVEVFSTGGTLKTLQDAGIAAASISTITGFP CCHHHHHHHHHCCCCCCHHHHHHHHHHHCEEEECCCCCHHHHHHCCCCHHHHHHHCCCH EIMDGRVKTLHPKIHGGLLAVRENPDHVNQANENGISFIDLVVVNLYPFEATVAKPDVTF HHHCCCCEEECCCCCCCEEEEECCCCHHCCCCCCCCEEEEEEEEEEECCEEEECCCCCCH EDAIENIDIGGPSMLRSAAKNNESVTVVTDSADYALVLQEMRNNNGATKRETRLALALKV HHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH FELTSRYDRAIASYLAGAQHEADSSMTVKLERELDMRYGENPHQSAGLYRLTDENGTRSF HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHCCCCCCCCCCEEEEECCCCCCHH SDYFEKLHGKELSYNNMLDIAAAVSLIEEFRGEEPTVVIIKHTNPCGVAQAPTLAEAYRR HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHH AFSTDTQAPFGGIIAFNHPLDMEAATAVNEIFTEILIAPAFEDGVLEMLMKKKDRRLVRQ HHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH TSALPKGGWEFKSTPFGMLVQERDSKIVTKEDLTVVTKRQPTEEEVADMMFAWKICKHIK HHCCCCCCCCCCCCCCCCEEECCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHC SNTILYVKNRQTFGVGAGQMSRVDSSKIARWKASEVNLDLHGSVVASDAFFPFADGLLAA CCEEEEEECCCEECCCCCHHHHCCHHHHHEEECCEECEEECCCEEECCCCCHHHHHHHHH AEAGVTAVIQPGGSIRDNEVIEAADANNLAMVFTGMRHFKH HHCCCEEEECCCCCCCCCCEEEECCCCCEEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA