| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356489
Identifier: 119356489
GI number: 119356489
Start: 746317
End: 747255
Strand: Direct
Name: 119356489
Synonym: Cpha266_0654
Alternate gene names: NA
Gene position: 746317-747255 (Clockwise)
Preceding gene: 119356488
Following gene: 119356492
Centisome position: 23.81
GC content: 48.78
Gene sequence:
>939_bases GTGAGCGCAAAAGAGATCAAAAATATCGGAGCCTCGGTCAGGCAAAGGCTGTTGAACAAGGCGCGACAGGAAAACAGGCC TTTTCAGGAGCTGTTGCAATACTATGCCATGGAGCGCTTTCTCTATCGTCTGTCGGTTTCTTCATTCGCAGATCGTTTCA TTCTCAAGGGGGCATTGTTGCTCAGGGTCTGGCATGCTCCCCTGGCAAGACCGACAATGGATATCGATATGCTCGGCAAA ACAGGAAACGCCCCGGAGAGTATCACGACGATTATCAGTCAGGTTTTAGCCGTTGAAAAACAAGGAGACGGGATCGTTTT CGATCCGGAATCAATCACCGTTGAGCCGATAACGGAAGATGCGGACTATGAAGGATTGCGCATACGATTTCGCGGTGATC TCGATGCCGCCCGACTGACTATTCAGCTTGATATTGGATTTGGAGACAAGGTCTACCCGGATCCTGTAAAGGAATCGTTA CCATCATTGCTGAATTTCCCTCAGGCTGAACTCTACTGTTACAGCAGGGAAAGCATGATTGCCGAAAAGTTTGAGGTGAT GGCCAAGCTTGGGATTCTCAACAGCAGGATGAAGGACTTCTATGATATCTGGATGCTCTCACGCCAGTATGATTTCGAAG GTGTCAGTCTCGCAGAAGCCATCAGGCAGACGTTTGCGCAACGGGGAACAACGCTCGTCCAGATGAAAGAAATCTTTTCC GGAGAGTTTATTGATGAGAAGCAGGTGCAATGGAATGCCTTCAGAAAACGTATTGGTCTTGAATACCTGCCGGCCTCGTT TGCTGATGTGGTACAGCAGGTGCAGGTATTTCTATCTCCAGCTGTGGAAGCGCTCAGGGCAAATCGACTTTTTCAGGACA ATTGGATTGCTCAGGATTCATGGCGGAGTAGTCATGAAAAACCAGAGGTGGGAGCATAA
Upstream 100 bases:
>100_bases TGTATCGGCAGAGAATGCAAAAGAATCTGCATGCACTCATGCAGTATGCAGAGGTGTGCCGTGTTGCCTCGGTCATGAAA CCATATCTGGAGGCAACACT
Downstream 100 bases:
>100_bases TCGTTGTTTTTATTTCTTGATAGATAGTGATAAAATTTTTGTTACGCGTATGTTCCGCGAAAATTTTTATAGGTCAGTAA CTCCTTTTATATCAATGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MSAKEIKNIGASVRQRLLNKARQENRPFQELLQYYAMERFLYRLSVSSFADRFILKGALLLRVWHAPLARPTMDIDMLGK TGNAPESITTIISQVLAVEKQGDGIVFDPESITVEPITEDADYEGLRIRFRGDLDAARLTIQLDIGFGDKVYPDPVKESL PSLLNFPQAELYCYSRESMIAEKFEVMAKLGILNSRMKDFYDIWMLSRQYDFEGVSLAEAIRQTFAQRGTTLVQMKEIFS GEFIDEKQVQWNAFRKRIGLEYLPASFADVVQQVQVFLSPAVEALRANRLFQDNWIAQDSWRSSHEKPEVGA
Sequences:
>Translated_312_residues MSAKEIKNIGASVRQRLLNKARQENRPFQELLQYYAMERFLYRLSVSSFADRFILKGALLLRVWHAPLARPTMDIDMLGK TGNAPESITTIISQVLAVEKQGDGIVFDPESITVEPITEDADYEGLRIRFRGDLDAARLTIQLDIGFGDKVYPDPVKESL PSLLNFPQAELYCYSRESMIAEKFEVMAKLGILNSRMKDFYDIWMLSRQYDFEGVSLAEAIRQTFAQRGTTLVQMKEIFS GEFIDEKQVQWNAFRKRIGLEYLPASFADVVQQVQVFLSPAVEALRANRLFQDNWIAQDSWRSSHEKPEVGA >Mature_311_residues SAKEIKNIGASVRQRLLNKARQENRPFQELLQYYAMERFLYRLSVSSFADRFILKGALLLRVWHAPLARPTMDIDMLGKT GNAPESITTIISQVLAVEKQGDGIVFDPESITVEPITEDADYEGLRIRFRGDLDAARLTIQLDIGFGDKVYPDPVKESLP SLLNFPQAELYCYSRESMIAEKFEVMAKLGILNSRMKDFYDIWMLSRQYDFEGVSLAEAIRQTFAQRGTTLVQMKEIFSG EFIDEKQVQWNAFRKRIGLEYLPASFADVVQQVQVFLSPAVEALRANRLFQDNWIAQDSWRSSHEKPEVGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35752; Mature: 35621
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKEIKNIGASVRQRLLNKARQENRPFQELLQYYAMERFLYRLSVSSFADRFILKGALL CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRVWHAPLARPTMDIDMLGKTGNAPESITTIISQVLAVEKQGDGIVFDPESITVEPITED HHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCC ADYEGLRIRFRGDLDAARLTIQLDIGFGDKVYPDPVKESLPSLLNFPQAELYCYSRESMI CCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHEEEECHHHHH AEKFEVMAKLGILNSRMKDFYDIWMLSRQYDFEGVSLAEAIRQTFAQRGTTLVQMKEIFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHC GEFIDEKQVQWNAFRKRIGLEYLPASFADVVQQVQVFLSPAVEALRANRLFQDNWIAQDS CCCCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCH WRSSHEKPEVGA HHCCCCCCCCCC >Mature Secondary Structure SAKEIKNIGASVRQRLLNKARQENRPFQELLQYYAMERFLYRLSVSSFADRFILKGALL CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRVWHAPLARPTMDIDMLGKTGNAPESITTIISQVLAVEKQGDGIVFDPESITVEPITED HHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCC ADYEGLRIRFRGDLDAARLTIQLDIGFGDKVYPDPVKESLPSLLNFPQAELYCYSRESMI CCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHEEEECHHHHH AEKFEVMAKLGILNSRMKDFYDIWMLSRQYDFEGVSLAEAIRQTFAQRGTTLVQMKEIFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHC GEFIDEKQVQWNAFRKRIGLEYLPASFADVVQQVQVFLSPAVEALRANRLFQDNWIAQDS CCCCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCH WRSSHEKPEVGA HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA