| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356488
Identifier: 119356488
GI number: 119356488
Start: 745706
End: 746320
Strand: Direct
Name: 119356488
Synonym: Cpha266_0653
Alternate gene names: NA
Gene position: 745706-746320 (Clockwise)
Preceding gene: 119356487
Following gene: 119356489
Centisome position: 23.79
GC content: 49.43
Gene sequence:
>615_bases ATGTTACAACAAAGTACAGTTGCAGCAGATAAGGCCAAAGCTCTTATTCTTGCCCGGGGGGGCCTCATTCGTACCCGGGA AGCGATCAGTCTTGGTATTCATCCCCGGACGCTTTACAGTCTTCGTGACAGCGGTGAGCTTGAAGAGCTTTCTCGAGGGA TTTACCAGCTTAGAGGGTGTAAGCAGCTCGAATATCCTGATCTTGTCACCGTTGCACTCAGGGTTCCGAATGGTGTACTT TGCCTGGTTTCGGCACTCTCCTTTCACGAGATGACCACCCAGGTTCCACACAGCGTATCTCTTGCGCTTGAAAAAGGTGC CGAACAACCAAGAATCGAGTATCCTCCGGTTACGGTTTTCCGGTTTTCATCCTCTTGTTTCAAGATCGGTATTGAAACGC ATCAGCTCGATGGTGTTTCGGTGAAGATCTACAGTCCGGAAAAGACGCTTGTAGACTGTTTCAAATTCCGTAACAGGATC GGGATGGATATCGTGCTCGAAGCGCTCAAACTGTATCGGCAGAGAATGCAAAAGAATCTGCATGCACTCATGCAGTATGC AGAGGTGTGCCGTGTTGCCTCGGTCATGAAACCATATCTGGAGGCAACACTGTGA
Upstream 100 bases:
>100_bases TTTTCCTCAGCCTTTTTCGATATTTCTCTGGTCTTTTGTTGGTTAGGATAAATAAACCTATACTTATGCATAATGTATGG TATTTCTATCCGTATGAAAA
Downstream 100 bases:
>100_bases GCGCAAAAGAGATCAAAAATATCGGAGCCTCGGTCAGGCAAAGGCTGTTGAACAAGGCGCGACAGGAAAACAGGCCTTTT CAGGAGCTGTTGCAATACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MLQQSTVAADKAKALILARGGLIRTREAISLGIHPRTLYSLRDSGELEELSRGIYQLRGCKQLEYPDLVTVALRVPNGVL CLVSALSFHEMTTQVPHSVSLALEKGAEQPRIEYPPVTVFRFSSSCFKIGIETHQLDGVSVKIYSPEKTLVDCFKFRNRI GMDIVLEALKLYRQRMQKNLHALMQYAEVCRVASVMKPYLEATL
Sequences:
>Translated_204_residues MLQQSTVAADKAKALILARGGLIRTREAISLGIHPRTLYSLRDSGELEELSRGIYQLRGCKQLEYPDLVTVALRVPNGVL CLVSALSFHEMTTQVPHSVSLALEKGAEQPRIEYPPVTVFRFSSSCFKIGIETHQLDGVSVKIYSPEKTLVDCFKFRNRI GMDIVLEALKLYRQRMQKNLHALMQYAEVCRVASVMKPYLEATL >Mature_204_residues MLQQSTVAADKAKALILARGGLIRTREAISLGIHPRTLYSLRDSGELEELSRGIYQLRGCKQLEYPDLVTVALRVPNGVL CLVSALSFHEMTTQVPHSVSLALEKGAEQPRIEYPPVTVFRFSSSCFKIGIETHQLDGVSVKIYSPEKTLVDCFKFRNRI GMDIVLEALKLYRQRMQKNLHALMQYAEVCRVASVMKPYLEATL
Specific function: Unknown
COG id: COG5340
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22940; Mature: 22940
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQQSTVAADKAKALILARGGLIRTREAISLGIHPRTLYSLRDSGELEELSRGIYQLRGC CCCCHHHHHHHHHEEEEECCCCEEHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHCCC KQLEYPDLVTVALRVPNGVLCLVSALSFHEMTTQVPHSVSLALEKGAEQPRIEYPPVTVF CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEE RFSSSCFKIGIETHQLDGVSVKIYSPEKTLVDCFKFRNRIGMDIVLEALKLYRQRMQKNL EECCCCEEECCEEEEECCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH HALMQYAEVCRVASVMKPYLEATL HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLQQSTVAADKAKALILARGGLIRTREAISLGIHPRTLYSLRDSGELEELSRGIYQLRGC CCCCHHHHHHHHHEEEEECCCCEEHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHCCC KQLEYPDLVTVALRVPNGVLCLVSALSFHEMTTQVPHSVSLALEKGAEQPRIEYPPVTVF CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEE RFSSSCFKIGIETHQLDGVSVKIYSPEKTLVDCFKFRNRIGMDIVLEALKLYRQRMQKNL EECCCCEEECCEEEEECCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH HALMQYAEVCRVASVMKPYLEATL HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA