| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356473
Identifier: 119356473
GI number: 119356473
Start: 729709
End: 730281
Strand: Direct
Name: 119356473
Synonym: Cpha266_0638
Alternate gene names: NA
Gene position: 729709-730281 (Clockwise)
Preceding gene: 119356472
Following gene: 119356474
Centisome position: 23.28
GC content: 40.14
Gene sequence:
>573_bases ATGAATCAAATAATTAAAGGAAAGGTTTATTCTCATGAACTTGATGGTTGGTTGGTGTCATGGGAAAGCGAGAGTGAATA TCGCCACTGGTGTCACCAAACGAATGAGAATTTTGTAGAAAATCTTCTTGTGGTCATGTTCAACCCAGGTAGTCTCAGTG GAGATGGCAAAAATCTCCGAAAGGACACGACTCTAAGAATCCTGAGAGAAGTATGCGGGCCAGCAGGTGTTAATCCATTT GTTGTGAATCTTTTTGATTATGCCAGCCCTTCACCGGATGAACTCTTTTCAAATTGGGAGAAGCGAGACGGTTGCGGCTT GATTTTTTCAAAATTGGAAATGATTAAATTTTCTGCTTTTATCATGGCTTACGGTGACTACGAAAATCGAGGTGAACGTG ACAATGAAATCAAAGAGCGTATAGCTTTGATTAAATCTCATCTTTCCGAAGCCAGAGAAATTCTTCTACCAAAGAACAGT AGCGGAACTCCAAAGCATCCAATGACTTGGCAGCGACAAAAGCTTAAACCAACAATTTCAAAGCTATTAGCCGAAGGTAT AGCAAATTGTTGA
Upstream 100 bases:
>100_bases GAGCTGAAAAGATCAGTTTGATAGGCGGCCAATATTTTAATGGAGGCTCCATTCATTTCTTCCACAAAACAGGATTACAG CTTTAAGAGGCTACCTTCCT
Downstream 100 bases:
>100_bases CCCTCCGAGCAGTTTGCTTTCAAGTTTTGCTTTGCAGTTGAGTTCCTTTTAGTTTCCCTCCGTTTTCGACGTTTAACCTC CCTTAGGAACCCCCTTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MNQIIKGKVYSHELDGWLVSWESESEYRHWCHQTNENFVENLLVVMFNPGSLSGDGKNLRKDTTLRILREVCGPAGVNPF VVNLFDYASPSPDELFSNWEKRDGCGLIFSKLEMIKFSAFIMAYGDYENRGERDNEIKERIALIKSHLSEAREILLPKNS SGTPKHPMTWQRQKLKPTISKLLAEGIANC
Sequences:
>Translated_190_residues MNQIIKGKVYSHELDGWLVSWESESEYRHWCHQTNENFVENLLVVMFNPGSLSGDGKNLRKDTTLRILREVCGPAGVNPF VVNLFDYASPSPDELFSNWEKRDGCGLIFSKLEMIKFSAFIMAYGDYENRGERDNEIKERIALIKSHLSEAREILLPKNS SGTPKHPMTWQRQKLKPTISKLLAEGIANC >Mature_190_residues MNQIIKGKVYSHELDGWLVSWESESEYRHWCHQTNENFVENLLVVMFNPGSLSGDGKNLRKDTTLRILREVCGPAGVNPF VVNLFDYASPSPDELFSNWEKRDGCGLIFSKLEMIKFSAFIMAYGDYENRGERDNEIKERIALIKSHLSEAREILLPKNS SGTPKHPMTWQRQKLKPTISKLLAEGIANC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21749; Mature: 21749
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQIIKGKVYSHELDGWLVSWESESEYRHWCHQTNENFVENLLVVMFNPGSLSGDGKNLR CCCCCCCCHHHEECCCEEEEECCCHHHHHHHHCCCHHHHHHEEEEEECCCCCCCCCCCHH KDTTLRILREVCGPAGVNPFVVNLFDYASPSPDELFSNWEKRDGCGLIFSKLEMIKFSAF HHHHHHHHHHHHCCCCCCHHEEHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH IMAYGDYENRGERDNEIKERIALIKSHLSEAREILLPKNSSGTPKHPMTWQRQKLKPTIS HHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH KLLAEGIANC HHHHHHHCCC >Mature Secondary Structure MNQIIKGKVYSHELDGWLVSWESESEYRHWCHQTNENFVENLLVVMFNPGSLSGDGKNLR CCCCCCCCHHHEECCCEEEEECCCHHHHHHHHCCCHHHHHHEEEEEECCCCCCCCCCCHH KDTTLRILREVCGPAGVNPFVVNLFDYASPSPDELFSNWEKRDGCGLIFSKLEMIKFSAF HHHHHHHHHHHHCCCCCCHHEEHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH IMAYGDYENRGERDNEIKERIALIKSHLSEAREILLPKNSSGTPKHPMTWQRQKLKPTIS HHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH KLLAEGIANC HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA