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The map label for this gene is ydiF [H]

Identifier: 119356454

GI number: 119356454

Start: 692743

End: 694701

Strand: Reverse

Name: ydiF [H]

Synonym: Cpha266_0618

Alternate gene names: 119356454

Gene position: 694701-692743 (Counterclockwise)

Preceding gene: 119356458

Following gene: 119356449

Centisome position: 22.17

GC content: 47.83

Gene sequence:

>1959_bases
ATGTTTGAAGCCCGTAACCTTTCTCTCAGCGTCGGAACCAAAGAGCTTTTGACCGATACCTCGTTCCGTATAGGAGACAA
AGACCACGTCAGTCTTGTCGGTCTGAACGGAACGGGAAAAACCACCCTTCTGCGCCTTATTAACGGGCCTGCCGCCGATT
CCGCCCTCATCACCACCGGTCAGTTTCTCAAATCGGCCGATACCACCATCGGTTATCTGCCGCAGGAGATCTCCTTTGAT
GCCGATCTCGAAAAAACCGCACTGCAATACGCCCTCCAGGCAAACATACGACTGTTTGAACTGGCTGACAAGATCACCAG
GATGGAACACGAACTCGCCCTGCCCGAACAGGATTATGAAAGCGAAGCCTACCACCATCTTATTGAACGTTTTTCAGATG
CGATGCATGAATTCGAGCATCTCGGAGGCTACACGATGCAGTCCAATGCGGAAAAGGTGCTCGCCGGTCTCGGATTCAGT
GAAATAGACTTCCATAAAAAAGTAAAGGCGTTTTCGGGCGGATGGCAGATGCGTCTTCATCTGACCAAACTCCTTCTCCA
GAACCCGACGCTGCTCTTGCTCGATGAGCCGACCAACCACCTTGATATCGACTCACTCCGCTGGCTCGAAAATTATCTCC
TCAACTACGAGCACAGCTATATTATCGTCTCACACGACCGGTTTTTCCTCGACAAGCTGACCACAAAAACCCTTGAAATC
GCCTTTGAACGCATCAACGAATACAAGGGAAATTACTCGTATTACGAAAAGGAAAAGGCTGAACGGTATGAGCTGATGAT
GGGTAAATATGAGAATGACCTGAAAAAAATGGAGGAGCTGAAAGCCTTTGTCGATCGATTCCGTTACAAGGCGACAAAAG
CAAGACAGGCGCAAAGCCGGCTCAGGCAGATGGAAAAAATGGAGAAAAACCTTCAGTCACCTGAAGAGGATCTCTCCCGT
ATCTCGTTTCGCTTTCCCAAGGCCAACCCCTCTGGCCGTGAAGTCATGCGACTTGAAGGTGTAAAAAAAGCCTATCTGCT
GCCTGACGGAACAAAAAAACAGGTGCTTGCCGGCATTGATCTGGAAGTAATGCGTGGTGACCGTATTGCTATTGTAGGAT
CAAATGGAGCGGGAAAAACGACCTTTTGCAAAATCCTTGCCGGAGAGATCGACTTTGATGGCAAACTCACCATGGGACAT
AATGTCTCTCTGAACTACTTTGCACAGCATCAGACAGAGAACCTCTCACAGGAGAAGAGCATCTACATGGAGATGATGGA
TTCAGCTCCCTCATCAGAAGCCCAGAAAAAGGTGCGGGATATTCTCGGCTGTTTTCTTTTCAGCGGAGATGCGGTCAACA
AAAAGATCAGAGTGCTATCGGGGGGAGAAAAGTCAAGGGTCGCCCTTGCAAAAATCCTCCTGCAAGCGTCAAATCTGCTG
ATTATGGATGAACCGACCAACCATCTCGACATGCGATCAAAAGAGATGCTGATTGATTCTCTTGAATATTATGACGGCAC
GCTTCTGATTGTCAGCCACGACCGTTACTTCCTCGACAGCCTGGTCAACAAGGTTGTTGAGATAAAAAACGGCACACTGC
AGCTCCACCTTGGCACGTATGCCGAATACCTTGAAACTGCTGAAAAAGCCATCGAGGCCGAGCGTAAGCAGGAAGCGGCA
ATGAAGCAAAAAAGTCAGGCAGCGCCAGTAAAAAATACGGAAAAAGAGAAAGAGCAAGCCAAAAAAAGCGCTGCTGCGAA
AAAAGATAAAAAGAGAGTGGAAGAGATCGAGCTGAAAATCAATCGGCTTGAGCAAAAAAAAGAGTCCATTGAAATTATCA
TGGCCAATGAGGATTTCTACAAAAAAAGCAAGGAAGAGACCTCGAAAACCCTCGATGGCTACCATGCGCTCTGCAAAGAG
CTGAACGATCTTTTTATCGAATGGGAGAAAAGTTCCTGA

Upstream 100 bases:

>100_bases
TTCCTTCCGTTCATGCAGCTTTCATGAATTATTGTATCTTTTCACCCATGTTAAAGATTTTTTTTCGAGATATACCTCAC
TTTTTTGGAGCCTTTTAAAC

Downstream 100 bases:

>100_bases
ATGAATATGAGACAAATATCTTTTTCAAAACAAGCTATAATTGTACATCCGCCCCGCCTCTTATGCAGGCGAATCCGGCT
TAACCGGCAGCCACTTGCTG

Product: ABC transporter related

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 652; Mature: 652

Protein sequence:

>652_residues
MFEARNLSLSVGTKELLTDTSFRIGDKDHVSLVGLNGTGKTTLLRLINGPAADSALITTGQFLKSADTTIGYLPQEISFD
ADLEKTALQYALQANIRLFELADKITRMEHELALPEQDYESEAYHHLIERFSDAMHEFEHLGGYTMQSNAEKVLAGLGFS
EIDFHKKVKAFSGGWQMRLHLTKLLLQNPTLLLLDEPTNHLDIDSLRWLENYLLNYEHSYIIVSHDRFFLDKLTTKTLEI
AFERINEYKGNYSYYEKEKAERYELMMGKYENDLKKMEELKAFVDRFRYKATKARQAQSRLRQMEKMEKNLQSPEEDLSR
ISFRFPKANPSGREVMRLEGVKKAYLLPDGTKKQVLAGIDLEVMRGDRIAIVGSNGAGKTTFCKILAGEIDFDGKLTMGH
NVSLNYFAQHQTENLSQEKSIYMEMMDSAPSSEAQKKVRDILGCFLFSGDAVNKKIRVLSGGEKSRVALAKILLQASNLL
IMDEPTNHLDMRSKEMLIDSLEYYDGTLLIVSHDRYFLDSLVNKVVEIKNGTLQLHLGTYAEYLETAEKAIEAERKQEAA
MKQKSQAAPVKNTEKEKEQAKKSAAAKKDKKRVEEIELKINRLEQKKESIEIIMANEDFYKKSKEETSKTLDGYHALCKE
LNDLFIEWEKSS

Sequences:

>Translated_652_residues
MFEARNLSLSVGTKELLTDTSFRIGDKDHVSLVGLNGTGKTTLLRLINGPAADSALITTGQFLKSADTTIGYLPQEISFD
ADLEKTALQYALQANIRLFELADKITRMEHELALPEQDYESEAYHHLIERFSDAMHEFEHLGGYTMQSNAEKVLAGLGFS
EIDFHKKVKAFSGGWQMRLHLTKLLLQNPTLLLLDEPTNHLDIDSLRWLENYLLNYEHSYIIVSHDRFFLDKLTTKTLEI
AFERINEYKGNYSYYEKEKAERYELMMGKYENDLKKMEELKAFVDRFRYKATKARQAQSRLRQMEKMEKNLQSPEEDLSR
ISFRFPKANPSGREVMRLEGVKKAYLLPDGTKKQVLAGIDLEVMRGDRIAIVGSNGAGKTTFCKILAGEIDFDGKLTMGH
NVSLNYFAQHQTENLSQEKSIYMEMMDSAPSSEAQKKVRDILGCFLFSGDAVNKKIRVLSGGEKSRVALAKILLQASNLL
IMDEPTNHLDMRSKEMLIDSLEYYDGTLLIVSHDRYFLDSLVNKVVEIKNGTLQLHLGTYAEYLETAEKAIEAERKQEAA
MKQKSQAAPVKNTEKEKEQAKKSAAAKKDKKRVEEIELKINRLEQKKESIEIIMANEDFYKKSKEETSKTLDGYHALCKE
LNDLFIEWEKSS
>Mature_652_residues
MFEARNLSLSVGTKELLTDTSFRIGDKDHVSLVGLNGTGKTTLLRLINGPAADSALITTGQFLKSADTTIGYLPQEISFD
ADLEKTALQYALQANIRLFELADKITRMEHELALPEQDYESEAYHHLIERFSDAMHEFEHLGGYTMQSNAEKVLAGLGFS
EIDFHKKVKAFSGGWQMRLHLTKLLLQNPTLLLLDEPTNHLDIDSLRWLENYLLNYEHSYIIVSHDRFFLDKLTTKTLEI
AFERINEYKGNYSYYEKEKAERYELMMGKYENDLKKMEELKAFVDRFRYKATKARQAQSRLRQMEKMEKNLQSPEEDLSR
ISFRFPKANPSGREVMRLEGVKKAYLLPDGTKKQVLAGIDLEVMRGDRIAIVGSNGAGKTTFCKILAGEIDFDGKLTMGH
NVSLNYFAQHQTENLSQEKSIYMEMMDSAPSSEAQKKVRDILGCFLFSGDAVNKKIRVLSGGEKSRVALAKILLQASNLL
IMDEPTNHLDMRSKEMLIDSLEYYDGTLLIVSHDRYFLDSLVNKVVEIKNGTLQLHLGTYAEYLETAEKAIEAERKQEAA
MKQKSQAAPVKNTEKEKEQAKKSAAAKKDKKRVEEIELKINRLEQKKESIEIIMANEDFYKKSKEETSKTLDGYHALCKE
LNDLFIEWEKSS

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=543, Percent_Identity=31.4917127071823, Blast_Score=263, Evalue=3e-70,
Organism=Homo sapiens, GI27881506, Length=549, Percent_Identity=30.9653916211293, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI10947137, Length=549, Percent_Identity=30.9653916211293, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI69354671, Length=520, Percent_Identity=32.8846153846154, Blast_Score=215, Evalue=1e-55,
Organism=Homo sapiens, GI10947135, Length=520, Percent_Identity=32.8846153846154, Blast_Score=215, Evalue=1e-55,
Organism=Escherichia coli, GI1789751, Length=621, Percent_Identity=33.3333333333333, Blast_Score=344, Evalue=9e-96,
Organism=Escherichia coli, GI1787041, Length=555, Percent_Identity=32.6126126126126, Blast_Score=294, Evalue=1e-80,
Organism=Escherichia coli, GI1787182, Length=650, Percent_Identity=29.6923076923077, Blast_Score=264, Evalue=1e-71,
Organism=Escherichia coli, GI2367384, Length=555, Percent_Identity=28.8288288288288, Blast_Score=229, Evalue=5e-61,
Organism=Escherichia coli, GI1788225, Length=206, Percent_Identity=29.126213592233, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1788165, Length=174, Percent_Identity=28.1609195402299, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787370, Length=217, Percent_Identity=23.5023041474654, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI87081791, Length=190, Percent_Identity=26.8421052631579, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI87081834, Length=206, Percent_Identity=28.1553398058252, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787112, Length=251, Percent_Identity=28.6852589641434, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87081709, Length=178, Percent_Identity=26.4044943820225, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786398, Length=225, Percent_Identity=25.7777777777778, Blast_Score=63, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=549, Percent_Identity=32.0582877959927, Blast_Score=255, Evalue=4e-68,
Organism=Caenorhabditis elegans, GI17559834, Length=533, Percent_Identity=30.7692307692308, Blast_Score=234, Evalue=8e-62,
Organism=Caenorhabditis elegans, GI17555318, Length=531, Percent_Identity=29.3785310734463, Blast_Score=226, Evalue=4e-59,
Organism=Saccharomyces cerevisiae, GI6321121, Length=535, Percent_Identity=34.018691588785, Blast_Score=267, Evalue=4e-72,
Organism=Saccharomyces cerevisiae, GI6320874, Length=544, Percent_Identity=30.3308823529412, Blast_Score=229, Evalue=1e-60,
Organism=Saccharomyces cerevisiae, GI6325030, Length=418, Percent_Identity=27.511961722488, Blast_Score=130, Evalue=5e-31,
Organism=Saccharomyces cerevisiae, GI6324314, Length=302, Percent_Identity=26.8211920529801, Blast_Score=111, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6323278, Length=258, Percent_Identity=29.8449612403101, Blast_Score=110, Evalue=8e-25,
Organism=Drosophila melanogaster, GI24666836, Length=552, Percent_Identity=32.2463768115942, Blast_Score=285, Evalue=1e-76,
Organism=Drosophila melanogaster, GI24641342, Length=550, Percent_Identity=32, Blast_Score=283, Evalue=3e-76,
Organism=Drosophila melanogaster, GI24642252, Length=560, Percent_Identity=30.8928571428571, Blast_Score=258, Evalue=1e-68,
Organism=Drosophila melanogaster, GI18859989, Length=560, Percent_Identity=30.8928571428571, Blast_Score=258, Evalue=1e-68,
Organism=Drosophila melanogaster, GI45550390, Length=279, Percent_Identity=26.5232974910394, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24653245, Length=272, Percent_Identity=26.1029411764706, Blast_Score=72, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281363262, Length=236, Percent_Identity=27.1186440677966, Blast_Score=72, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 74576; Mature: 74576

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEARNLSLSVGTKELLTDTSFRIGDKDHVSLVGLNGTGKTTLLRLINGPAADSALITTG
CCCCCCCEEECCCHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCHHEEHH
QFLKSADTTIGYLPQEISFDADLEKTALQYALQANIRLFELADKITRMEHELALPEQDYE
HHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCH
SEAYHHLIERFSDAMHEFEHLGGYTMQSNAEKVLAGLGFSEIDFHKKVKAFSGGWQMRLH
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEHHH
LTKLLLQNPTLLLLDEPTNHLDIDSLRWLENYLLNYEHSYIIVSHDRFFLDKLTTKTLEI
HHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH
AFERINEYKGNYSYYEKEKAERYELMMGKYENDLKKMEELKAFVDRFRYKATKARQAQSR
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRQMEKMEKNLQSPEEDLSRISFRFPKANPSGREVMRLEGVKKAYLLPDGTKKQVLAGID
HHHHHHHHHHCCCCHHHHHHHEEECCCCCCCCHHHHHHHCCCEEEECCCCCHHHEEECCC
LEVMRGDRIAIVGSNGAGKTTFCKILAGEIDFDGKLTMGHNVSLNYFAQHQTENLSQEKS
EEEECCCEEEEEECCCCCCHHEEHEEECCCCCCCEEEECCCCCEEEEEHHHHHCCHHHHH
IYMEMMDSAPSSEAQKKVRDILGCFLFSGDAVNKKIRVLSGGEKSRVALAKILLQASNLL
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCEE
IMDEPTNHLDMRSKEMLIDSLEYYDGTLLIVSHDRYFLDSLVNKVVEIKNGTLQLHLGTY
EEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECHH
AEYLETAEKAIEAERKQEAAMKQKSQAAPVKNTEKEKEQAKKSAAAKKDKKRVEEIELKI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRLEQKKESIEIIMANEDFYKKSKEETSKTLDGYHALCKELNDLFIEWEKSS
HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
>Mature Secondary Structure
MFEARNLSLSVGTKELLTDTSFRIGDKDHVSLVGLNGTGKTTLLRLINGPAADSALITTG
CCCCCCCEEECCCHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCHHEEHH
QFLKSADTTIGYLPQEISFDADLEKTALQYALQANIRLFELADKITRMEHELALPEQDYE
HHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCH
SEAYHHLIERFSDAMHEFEHLGGYTMQSNAEKVLAGLGFSEIDFHKKVKAFSGGWQMRLH
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEHHH
LTKLLLQNPTLLLLDEPTNHLDIDSLRWLENYLLNYEHSYIIVSHDRFFLDKLTTKTLEI
HHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH
AFERINEYKGNYSYYEKEKAERYELMMGKYENDLKKMEELKAFVDRFRYKATKARQAQSR
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRQMEKMEKNLQSPEEDLSRISFRFPKANPSGREVMRLEGVKKAYLLPDGTKKQVLAGID
HHHHHHHHHHCCCCHHHHHHHEEECCCCCCCCHHHHHHHCCCEEEECCCCCHHHEEECCC
LEVMRGDRIAIVGSNGAGKTTFCKILAGEIDFDGKLTMGHNVSLNYFAQHQTENLSQEKS
EEEECCCEEEEEECCCCCCHHEEHEEECCCCCCCEEEECCCCCEEEEEHHHHHCCHHHHH
IYMEMMDSAPSSEAQKKVRDILGCFLFSGDAVNKKIRVLSGGEKSRVALAKILLQASNLL
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCEE
IMDEPTNHLDMRSKEMLIDSLEYYDGTLLIVSHDRYFLDSLVNKVVEIKNGTLQLHLGTY
EEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECHH
AEYLETAEKAIEAERKQEAAMKQKSQAAPVKNTEKEKEQAKKSAAAKKDKKRVEEIELKI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRLEQKKESIEIIMANEDFYKKSKEETSKTLDGYHALCKELNDLFIEWEKSS
HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]