| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is purE [H]
Identifier: 119356449
GI number: 119356449
Start: 684476
End: 685003
Strand: Reverse
Name: purE [H]
Synonym: Cpha266_0613
Alternate gene names: 119356449
Gene position: 685003-684476 (Counterclockwise)
Preceding gene: 119356454
Following gene: 119356448
Centisome position: 21.86
GC content: 50.95
Gene sequence:
>528_bases ATGACACAAACAATCTCTGATCAATTCAAGCCTGTTGTAGGTATCCTCATGGGCTCCGATTCCGACTTCGACATTATGAA AGCAGCCACAACGGTTCTCGACGATTTCGCAGTCCCGTATGAAGTATCGGTTATTTCAGCGCACCGAACCCCGCACGACC TTGAAACCTATGCCACATCGGCCCAGGAACGCGGTCTTAAAATCATCATAGCCGGAGCTGGCGGAGCAGCACATCTGCCA GGCGTTACGGCAGCCTTGACTCTTCTTCCGGTTATCGGTGTTCCGGTTTTCAGCAAAAAGCTGAGCGGCCTGGACTCCCT CTACTCGATCGTGCAGATGCCTGCAGGTATTCCCGTAGCGACCGTAGGTATTGATAATGCCCGAAATGCGGCGCTCCTTG CCCTGCAGATGCTCGCGCTTTCCGATGAAGTTCTGATGCAGGCAATCAAAGCATTCCGTCTTGGGCTTGCAGAGGAATCA AGGCTGAAAAACGAAAATATAAAACATAAACTACGTGCAAAAAGCTGA
Upstream 100 bases:
>100_bases TGTCTGATACTGTGGAAAATACATAAAACTCGACAATTTCATAAATTCATCCCATCTTACAAACAGACCGCCTTTATATG CCGTCAGCTCATTTATTTTT
Downstream 100 bases:
>100_bases GTTCTGGATAACGCACCTGGCGTTGCAGCAACATCCTGAAGGAGGCTTCTACCGGGAAACATACCGAAATAGAGGGGGCT ATGATTTCACAGGAAGCACT
Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTQTISDQFKPVVGILMGSDSDFDIMKAATTVLDDFAVPYEVSVISAHRTPHDLETYATSAQERGLKIIIAGAGGAAHLP GVTAALTLLPVIGVPVFSKKLSGLDSLYSIVQMPAGIPVATVGIDNARNAALLALQMLALSDEVLMQAIKAFRLGLAEES RLKNENIKHKLRAKS
Sequences:
>Translated_175_residues MTQTISDQFKPVVGILMGSDSDFDIMKAATTVLDDFAVPYEVSVISAHRTPHDLETYATSAQERGLKIIIAGAGGAAHLP GVTAALTLLPVIGVPVFSKKLSGLDSLYSIVQMPAGIPVATVGIDNARNAALLALQMLALSDEVLMQAIKAFRLGLAEES RLKNENIKHKLRAKS >Mature_174_residues TQTISDQFKPVVGILMGSDSDFDIMKAATTVLDDFAVPYEVSVISAHRTPHDLETYATSAQERGLKIIIAGAGGAAHLPG VTAALTLLPVIGVPVFSKKLSGLDSLYSIVQMPAGIPVATVGIDNARNAALLALQMLALSDEVLMQAIKAFRLGLAEESR LKNENIKHKLRAKS
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=110, Percent_Identity=60.9090909090909, Blast_Score=136, Evalue=7e-34, Organism=Saccharomyces cerevisiae, GI6324702, Length=159, Percent_Identity=57.8616352201258, Blast_Score=188, Evalue=3e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 18553; Mature: 18422
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTISDQFKPVVGILMGSDSDFDIMKAATTVLDDFAVPYEVSVISAHRTPHDLETYATS CCCCCHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHH AQERGLKIIIAGAGGAAHLPGVTAALTLLPVIGVPVFSKKLSGLDSLYSIVQMPAGIPVA HHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEE TVGIDNARNAALLALQMLALSDEVLMQAIKAFRLGLAEESRLKNENIKHKLRAKS EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHCCCC >Mature Secondary Structure TQTISDQFKPVVGILMGSDSDFDIMKAATTVLDDFAVPYEVSVISAHRTPHDLETYATS CCCCHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHH AQERGLKIIIAGAGGAAHLPGVTAALTLLPVIGVPVFSKKLSGLDSLYSIVQMPAGIPVA HHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEE TVGIDNARNAALLALQMLALSDEVLMQAIKAFRLGLAEESRLKNENIKHKLRAKS EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]