| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356443
Identifier: 119356443
GI number: 119356443
Start: 680022
End: 680699
Strand: Reverse
Name: 119356443
Synonym: Cpha266_0607
Alternate gene names: NA
Gene position: 680699-680022 (Counterclockwise)
Preceding gene: 119356444
Following gene: 119356438
Centisome position: 21.72
GC content: 43.95
Gene sequence:
>678_bases ATGACTGCGTACGAAAAAGAGTTTTACGTGAACAGACACGAAAAAACCATTCATGCTGCAAATACCATTCTTTCGATGCT TTTAGATCGTATTCCGACCGTTCATTCAGCCGTTGACGTCGGATGCGGTACAGGAACATGGCTCTCTGTGTTACAGCAAA AAGGAGTGAACGAAATCCAGGGTTTCGACGGAAGCTGGATGGACCGGAATCTGCTGGCAATCCCGTACTCATGCTTCACA GAGATAGACCTGACCAGATCAATGATACGATCAATAACAAAATACGATCTTGCCATCTCCCTTGAAGTCGCAGAACACTT GCCTTCTGATTGCGCGGAGGAATTTATTTTTTCTCTTACAGAACTCTCCGACTACGTACTTTTTTCAGCAGCTATCCCTT TTCAAGGTGGCCAACATCACGTCAACGAGCAGTGGCAACACTACTGGGTAGAGCTGTTCAGGAAGATGGATTATCTTGTT TATGACATAATCCGGCCAAAAATCTGGAATGACAACCGCATTCCGTTCTGGTACAGACAAAACATTTTATTGTTTGTCAG AAAACAGAAAACAACATCCACGTTAAATGGCTGGCCATATGTCGAACTTTCGTCATCGCCCATAGACATTGTACATCCTG ATCTCTATCTGATCAGGCAATCAGGCAAACCGGAATAA
Upstream 100 bases:
>100_bases CCATTCGCCCTCGTTTCGGCATATGTCGGCATTGCCTTTGCTGTCCTGTACCGCAGGAAATCAGCTGAATCGAATAGAAA TCGATCAAACAAATAAAAGC
Downstream 100 bases:
>100_bases AAACCATCACGCGTTGACTCGGAAGACGATATTCGAACCTCATAAACGTGGCATTAATCGAGCTGAAAACGGATCGGAAC CGTAAACCATACCTTGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTAYEKEFYVNRHEKTIHAANTILSMLLDRIPTVHSAVDVGCGTGTWLSVLQQKGVNEIQGFDGSWMDRNLLAIPYSCFT EIDLTRSMIRSITKYDLAISLEVAEHLPSDCAEEFIFSLTELSDYVLFSAAIPFQGGQHHVNEQWQHYWVELFRKMDYLV YDIIRPKIWNDNRIPFWYRQNILLFVRKQKTTSTLNGWPYVELSSSPIDIVHPDLYLIRQSGKPE
Sequences:
>Translated_225_residues MTAYEKEFYVNRHEKTIHAANTILSMLLDRIPTVHSAVDVGCGTGTWLSVLQQKGVNEIQGFDGSWMDRNLLAIPYSCFT EIDLTRSMIRSITKYDLAISLEVAEHLPSDCAEEFIFSLTELSDYVLFSAAIPFQGGQHHVNEQWQHYWVELFRKMDYLV YDIIRPKIWNDNRIPFWYRQNILLFVRKQKTTSTLNGWPYVELSSSPIDIVHPDLYLIRQSGKPE >Mature_224_residues TAYEKEFYVNRHEKTIHAANTILSMLLDRIPTVHSAVDVGCGTGTWLSVLQQKGVNEIQGFDGSWMDRNLLAIPYSCFTE IDLTRSMIRSITKYDLAISLEVAEHLPSDCAEEFIFSLTELSDYVLFSAAIPFQGGQHHVNEQWQHYWVELFRKMDYLVY DIIRPKIWNDNRIPFWYRQNILLFVRKQKTTSTLNGWPYVELSSSPIDIVHPDLYLIRQSGKPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26209; Mature: 26078
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAYEKEFYVNRHEKTIHAANTILSMLLDRIPTVHSAVDVGCGTGTWLSVLQQKGVNEIQ CCCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCHHHC GFDGSWMDRNLLAIPYSCFTEIDLTRSMIRSITKYDLAISLEVAEHLPSDCAEEFIFSLT CCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHCCCHHHHHHHHHHHH ELSDYVLFSAAIPFQGGQHHVNEQWQHYWVELFRKMDYLVYDIIRPKIWNDNRIPFWYRQ HHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEC NILLFVRKQKTTSTLNGWPYVELSSSPIDIVHPDLYLIRQSGKPE CEEEEEECCCCCCCCCCCCEEEECCCCCEEECCCEEEEECCCCCC >Mature Secondary Structure TAYEKEFYVNRHEKTIHAANTILSMLLDRIPTVHSAVDVGCGTGTWLSVLQQKGVNEIQ CCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCHHHC GFDGSWMDRNLLAIPYSCFTEIDLTRSMIRSITKYDLAISLEVAEHLPSDCAEEFIFSLT CCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHCCCHHHHHHHHHHHH ELSDYVLFSAAIPFQGGQHHVNEQWQHYWVELFRKMDYLVYDIIRPKIWNDNRIPFWYRQ HHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEC NILLFVRKQKTTSTLNGWPYVELSSSPIDIVHPDLYLIRQSGKPE CEEEEEECCCCCCCCCCCCEEEECCCCCEEECCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA