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The map label for this gene is dnaG [H]

Identifier: 119356438

GI number: 119356438

Start: 675077

End: 676987

Strand: Reverse

Name: dnaG [H]

Synonym: Cpha266_0602

Alternate gene names: 119356438

Gene position: 676987-675077 (Counterclockwise)

Preceding gene: 119356443

Following gene: 119356435

Centisome position: 21.6

GC content: 47.57

Gene sequence:

>1911_bases
ATGGATCAAGAAGTTATGATTCCTCAAAACATCATTGACGACATCCGTCGAAGCACTGACATTGTTGATCTGATAGCCGA
CTATGTCAAGCTGCACCCTTCAGGAAGGAACTATAAGGCTCTTTCACCGTTCACGCAGGAAAAAACGCCTTCGTTCGTCG
TTTCTCCAGACAAACAGATATTCAAATGTTTTTCAACCGGCAAAGGAGGCAATGTCTACACCTTTGTCATGGAAATGGAA
AAGATCTCTTTTCCGGAAGCCGTAGAACTTCTGGCAAAAAGAACCGGCATTGATATAAGCCGTTTCACAAAACAGCAAAA
AATACAAAACGAAGAAAACGAGAGCCAGACCGGAACTCTCCGTTGGGCGGCTAGAACTTTTCACAACACCCTTGAAAGCC
CAAAAGGAGTTCAAGGATTGTCCTATCTCACCGAAGCGCGAGGACTGAGCAGAGCGATAATACAACAATTCGGCATCGGC
TATGCGCCAGATCAGTGGGACAACCTTATCAATGAAGCAAAGCAGGCTTCTATCCCGCTGGCCAACCTCACCGAACTCGG
TCTGACGACACACCATAAAGAACGTGGTTCCTGGTATGATACCTTTCGCAACAGGGTGATTTTTCCGATTTTCTCAATTG
GCGGACAGGTTGCAGGATTTGGCGGGCGAACCCTTGACTCCGATCCGCGTACGCCAAAATATCTTAATTCACCGGAAAAC
CCCCTTTTTGAAAAGTCAAAGCTGCTTTATGGTCTGCATGCAGCCAAGGATGAAATCAGGCGCTCTGAATCAGCGCTGCT
CGTCGAAGGGTACATGGATGTGCTTGCCCTGCATCAAGCAGGAATAACCACAGCCGTAGCCTCTTGCGGAACATCCCTGA
CCCGCTACCAGGCAAAAATTCTACAACGCTATACGAACCGTGTCCTGTTCGTCTATGATGCCGATCCGGCAGGAAAAAAA
TCAATGATGGCTGGTATAGACACTCTCGTTACAGAAGGAATCACCCCGTTTGTACTGGAACTTCCCTCCGGAGACGATCC
GGACAGCTTTGTACAGAGAGCAGGAAAAGAGGAGTTCCTTCGTTACAGCGAAAAAAACAAACAGTCATTTATCGATTTCC
AGATCCGGTTTTTCACCCAATCAGGCAACTTCGCCCAAACTGACGTCAAAGCCAAAGCAATCAGGGCCATTACTCACACC
ATCGCGCTTATCCCGGATCGTATCCGACAGGAACTCTACCTTCAGGAACTGTCGGAAAAACTCGGCATCAGCTTCTCGTC
ACTCAAGGAACTTCTCGTTATTGAATCCACAATGAGAAGAGAAAAAAATATTCCCGGCGAAAACAGCATGAGAGCCCGGC
CAACTCCCGTTCCAGAAAAAAAAATGTCCGTACTTGAACGAACCTTTTTAAAAGCCCTGCTTGAAAGCTCCTTTTACGGC
AATGCCGTGCTTGAATTCGCGGCATCTCACGAAAATATGCTGACCTTGCCAAACCCACTGGCTCAAAACATTTTCACACA
CCTCATCCGGCGATACCACTCGCTCTCAGGCTCTCCGAACGACCATCTTGACATTATCAGCGAGATCAGCATGTTCAGTG
AGCCCGAAGCCCGGAATCTCGCATCCGGCTTGCTTCTTGATCAGCCGGTCAGCAAAAAGTGGCATGAGCAAACCGATCTC
AATGCGGAAAATGCCCGACAATGCCTTGCGTCATTCCTCGACGCCTTCAAAAGCCTTGTGCTTGAGCCGTTAATCCGGCA
GAAAGAGATTCTGACGGAACAGATTCGGAATGAAAATGACGCGGCCCTCGAAACAGAGCTTCTCAGAGAAAAAATTACGC
TTGACAGAAAAATCAGAAAAACCTCAGATGATCTCAGAGCAATGATCAGAAGCATTATTGATAACCGATAA

Upstream 100 bases:

>100_bases
TATCGAAAAAAAACTGATGAAAAGGGCTTTACTAACTTGCGGTGACGGATGATTTCCCTTTTCTTGAACCTGGGACTCTA
TGCCGGGGAAAAACGAATGA

Downstream 100 bases:

>100_bases
ACAGAGGTAACGCGAAAAAAAAGCCGCCTCAGAAGCGAAAGCTCCGAAAGGCGGCAAAAAAAAATCCGAAAAGAGCACGG
CAGCTTATGGCGTCATCTCA

Product: DNA primase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 636; Mature: 636

Protein sequence:

>636_residues
MDQEVMIPQNIIDDIRRSTDIVDLIADYVKLHPSGRNYKALSPFTQEKTPSFVVSPDKQIFKCFSTGKGGNVYTFVMEME
KISFPEAVELLAKRTGIDISRFTKQQKIQNEENESQTGTLRWAARTFHNTLESPKGVQGLSYLTEARGLSRAIIQQFGIG
YAPDQWDNLINEAKQASIPLANLTELGLTTHHKERGSWYDTFRNRVIFPIFSIGGQVAGFGGRTLDSDPRTPKYLNSPEN
PLFEKSKLLYGLHAAKDEIRRSESALLVEGYMDVLALHQAGITTAVASCGTSLTRYQAKILQRYTNRVLFVYDADPAGKK
SMMAGIDTLVTEGITPFVLELPSGDDPDSFVQRAGKEEFLRYSEKNKQSFIDFQIRFFTQSGNFAQTDVKAKAIRAITHT
IALIPDRIRQELYLQELSEKLGISFSSLKELLVIESTMRREKNIPGENSMRARPTPVPEKKMSVLERTFLKALLESSFYG
NAVLEFAASHENMLTLPNPLAQNIFTHLIRRYHSLSGSPNDHLDIISEISMFSEPEARNLASGLLLDQPVSKKWHEQTDL
NAENARQCLASFLDAFKSLVLEPLIRQKEILTEQIRNENDAALETELLREKITLDRKIRKTSDDLRAMIRSIIDNR

Sequences:

>Translated_636_residues
MDQEVMIPQNIIDDIRRSTDIVDLIADYVKLHPSGRNYKALSPFTQEKTPSFVVSPDKQIFKCFSTGKGGNVYTFVMEME
KISFPEAVELLAKRTGIDISRFTKQQKIQNEENESQTGTLRWAARTFHNTLESPKGVQGLSYLTEARGLSRAIIQQFGIG
YAPDQWDNLINEAKQASIPLANLTELGLTTHHKERGSWYDTFRNRVIFPIFSIGGQVAGFGGRTLDSDPRTPKYLNSPEN
PLFEKSKLLYGLHAAKDEIRRSESALLVEGYMDVLALHQAGITTAVASCGTSLTRYQAKILQRYTNRVLFVYDADPAGKK
SMMAGIDTLVTEGITPFVLELPSGDDPDSFVQRAGKEEFLRYSEKNKQSFIDFQIRFFTQSGNFAQTDVKAKAIRAITHT
IALIPDRIRQELYLQELSEKLGISFSSLKELLVIESTMRREKNIPGENSMRARPTPVPEKKMSVLERTFLKALLESSFYG
NAVLEFAASHENMLTLPNPLAQNIFTHLIRRYHSLSGSPNDHLDIISEISMFSEPEARNLASGLLLDQPVSKKWHEQTDL
NAENARQCLASFLDAFKSLVLEPLIRQKEILTEQIRNENDAALETELLREKITLDRKIRKTSDDLRAMIRSIIDNR
>Mature_636_residues
MDQEVMIPQNIIDDIRRSTDIVDLIADYVKLHPSGRNYKALSPFTQEKTPSFVVSPDKQIFKCFSTGKGGNVYTFVMEME
KISFPEAVELLAKRTGIDISRFTKQQKIQNEENESQTGTLRWAARTFHNTLESPKGVQGLSYLTEARGLSRAIIQQFGIG
YAPDQWDNLINEAKQASIPLANLTELGLTTHHKERGSWYDTFRNRVIFPIFSIGGQVAGFGGRTLDSDPRTPKYLNSPEN
PLFEKSKLLYGLHAAKDEIRRSESALLVEGYMDVLALHQAGITTAVASCGTSLTRYQAKILQRYTNRVLFVYDADPAGKK
SMMAGIDTLVTEGITPFVLELPSGDDPDSFVQRAGKEEFLRYSEKNKQSFIDFQIRFFTQSGNFAQTDVKAKAIRAITHT
IALIPDRIRQELYLQELSEKLGISFSSLKELLVIESTMRREKNIPGENSMRARPTPVPEKKMSVLERTFLKALLESSFYG
NAVLEFAASHENMLTLPNPLAQNIFTHLIRRYHSLSGSPNDHLDIISEISMFSEPEARNLASGLLLDQPVSKKWHEQTDL
NAENARQCLASFLDAFKSLVLEPLIRQKEILTEQIRNENDAALETELLREKITLDRKIRKTSDDLRAMIRSIIDNR

Specific function: DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments on both template strands at replication forks during chromosomal DNA synthesis [H]

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1789447, Length=427, Percent_Identity=38.8758782201405, Blast_Score=261, Evalue=8e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007693
- InterPro:   IPR013264
- InterPro:   IPR019475
- InterPro:   IPR006295
- InterPro:   IPR006171
- InterPro:   IPR002694 [H]

Pfam domain/function: PF10410 DnaB_bind; PF01751 Toprim; PF08275 Toprim_N; PF01807 zf-CHC2 [H]

EC number: 2.7.7.-

Molecular weight: Translated: 71951; Mature: 71951

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQEVMIPQNIIDDIRRSTDIVDLIADYVKLHPSGRNYKALSPFTQEKTPSFVVSPDKQI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHH
FKCFSTGKGGNVYTFVMEMEKISFPEAVELLAKRTGIDISRFTKQQKIQNEENESQTGTL
HHHHHCCCCCCEEEEEEEHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHH
RWAARTFHNTLESPKGVQGLSYLTEARGLSRAIIQQFGIGYAPDQWDNLINEAKQASIPL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCH
ANLTELGLTTHHKERGSWYDTFRNRVIFPIFSIGGQVAGFGGRTLDSDPRTPKYLNSPEN
HHHHHHCCCCCCHHCCCHHHHHHCCEEEEHHHCCCCEECCCCCCCCCCCCCCCCCCCCCC
PLFEKSKLLYGLHAAKDEIRRSESALLVEGYMDVLALHQAGITTAVASCGTSLTRYQAKI
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LQRYTNRVLFVYDADPAGKKSMMAGIDTLVTEGITPFVLELPSGDDPDSFVQRAGKEEFL
HHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCHHHHH
RYSEKNKQSFIDFQIRFFTQSGNFAQTDVKAKAIRAITHTIALIPDRIRQELYLQELSEK
HHHHHCCHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGISFSSLKELLVIESTMRREKNIPGENSMRARPTPVPEKKMSVLERTFLKALLESSFYG
HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
NAVLEFAASHENMLTLPNPLAQNIFTHLIRRYHSLSGSPNDHLDIISEISMFSEPEARNL
HHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHH
ASGLLLDQPVSKKWHEQTDLNAENARQCLASFLDAFKSLVLEPLIRQKEILTEQIRNEND
HHCCHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AALETELLREKITLDRKIRKTSDDLRAMIRSIIDNR
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDQEVMIPQNIIDDIRRSTDIVDLIADYVKLHPSGRNYKALSPFTQEKTPSFVVSPDKQI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHH
FKCFSTGKGGNVYTFVMEMEKISFPEAVELLAKRTGIDISRFTKQQKIQNEENESQTGTL
HHHHHCCCCCCEEEEEEEHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHH
RWAARTFHNTLESPKGVQGLSYLTEARGLSRAIIQQFGIGYAPDQWDNLINEAKQASIPL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCH
ANLTELGLTTHHKERGSWYDTFRNRVIFPIFSIGGQVAGFGGRTLDSDPRTPKYLNSPEN
HHHHHHCCCCCCHHCCCHHHHHHCCEEEEHHHCCCCEECCCCCCCCCCCCCCCCCCCCCC
PLFEKSKLLYGLHAAKDEIRRSESALLVEGYMDVLALHQAGITTAVASCGTSLTRYQAKI
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LQRYTNRVLFVYDADPAGKKSMMAGIDTLVTEGITPFVLELPSGDDPDSFVQRAGKEEFL
HHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCHHHHH
RYSEKNKQSFIDFQIRFFTQSGNFAQTDVKAKAIRAITHTIALIPDRIRQELYLQELSEK
HHHHHCCHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGISFSSLKELLVIESTMRREKNIPGENSMRARPTPVPEKKMSVLERTFLKALLESSFYG
HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
NAVLEFAASHENMLTLPNPLAQNIFTHLIRRYHSLSGSPNDHLDIISEISMFSEPEARNL
HHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHH
ASGLLLDQPVSKKWHEQTDLNAENARQCLASFLDAFKSLVLEPLIRQKEILTEQIRNEND
HHCCHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AALETELLREKITLDRKIRKTSDDLRAMIRSIIDNR
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups; Nucleotidyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]