| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356398
Identifier: 119356398
GI number: 119356398
Start: 630005
End: 630724
Strand: Direct
Name: 119356398
Synonym: Cpha266_0562
Alternate gene names: NA
Gene position: 630005-630724 (Clockwise)
Preceding gene: 119356396
Following gene: 119356399
Centisome position: 20.1
GC content: 49.72
Gene sequence:
>720_bases ATGGACAGGATGTTGATTTCCGCTGATAAGCAAAGCCGGGAGATGGCTGAGCTTTATGATGCACTTTCCGGAGAGTATGA TCTTCGGGAGAGCCCCTTTACATTTGCCGATCAAACGTTCAGTTTTCTCAGTGTTCTCGACAGTTACGCGCTGCTTGACA GAATAACGCAGGAAGAGTTTGTCAAGGATGAGCAGATGCCCTACTGGGCAGAAATATGGCCTGCTGCGATCGCGCTTTCT TCTTTTATTGCCGAAGATCTGATGCTCGAAGGGAGGCGGGTGATTGAAATCGGCGCAGGAGTCGGCATGGTGTCTGTAAC AGCAGCGCGTTTTGGTGCCGGTGTGCTGGCTACTGACTATTCGACTGAAGCGCTGAGGTTTGTTCGCTATAATGCGCTGC TTAACCGAGTCTCTCTTGAGACAGCCCGTCTTGACTGGCGAAGCGTGATGTGCAGTGAGCAGTTTGATTTTCTCTTTGCT GCCGATGTCCTTTATGAAAGGGTCAACTTGCTTCCTGTTGTTACAGCCATTGACAAGCTGCTTAAACCGGACGGTGTCGC TTATGTGGCTGATCCTCGACGAAGACTCGCTGAACAGTTTCTTGAGCTGGCCGCTGAAAACAGCTTTATCATTACGCCTG AGTTGCATGAGTTCAGAATAGGCAGGCCTCCTGTCGCGGTGACTATCTATAGAATAACAAGATGTCAGCAGTTGTCATGA
Upstream 100 bases:
>100_bases CGTTTGACTTTCTGTAAATTTTCATGCCTGTTTTTTTCTGAAATATAAAAGAAGGGTTTCTTCTACTAACCAAAGATTCA ATCGATGCAGAGGATACGTT
Downstream 100 bases:
>100_bases ACAACGGAACCATGAGGTTTACACGCCGGTGGTCATTTCACGCGGGAGAGGGTGCGTTGGTATGGCAGCTTGTTTTTCCT CAAACGGGCGAGGTGGTTGG
Product: methyltransferase type 12
Products: NA
Alternate protein names: Methyltransferase Small; Methyltransferase; Methyltransferase Domain Protein; Methyltransferase-; Ribosomal Methyltransferase; Lipocalin; Methyltransferase Domain Family
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MDRMLISADKQSREMAELYDALSGEYDLRESPFTFADQTFSFLSVLDSYALLDRITQEEFVKDEQMPYWAEIWPAAIALS SFIAEDLMLEGRRVIEIGAGVGMVSVTAARFGAGVLATDYSTEALRFVRYNALLNRVSLETARLDWRSVMCSEQFDFLFA ADVLYERVNLLPVVTAIDKLLKPDGVAYVADPRRRLAEQFLELAAENSFIITPELHEFRIGRPPVAVTIYRITRCQQLS
Sequences:
>Translated_239_residues MDRMLISADKQSREMAELYDALSGEYDLRESPFTFADQTFSFLSVLDSYALLDRITQEEFVKDEQMPYWAEIWPAAIALS SFIAEDLMLEGRRVIEIGAGVGMVSVTAARFGAGVLATDYSTEALRFVRYNALLNRVSLETARLDWRSVMCSEQFDFLFA ADVLYERVNLLPVVTAIDKLLKPDGVAYVADPRRRLAEQFLELAAENSFIITPELHEFRIGRPPVAVTIYRITRCQQLS >Mature_239_residues MDRMLISADKQSREMAELYDALSGEYDLRESPFTFADQTFSFLSVLDSYALLDRITQEEFVKDEQMPYWAEIWPAAIALS SFIAEDLMLEGRRVIEIGAGVGMVSVTAARFGAGVLATDYSTEALRFVRYNALLNRVSLETARLDWRSVMCSEQFDFLFA ADVLYERVNLLPVVTAIDKLLKPDGVAYVADPRRRLAEQFLELAAENSFIITPELHEFRIGRPPVAVTIYRITRCQQLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27145; Mature: 27145
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRMLISADKQSREMAELYDALSGEYDLRESPFTFADQTFSFLSVLDSYALLDRITQEEF CCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VKDEQMPYWAEIWPAAIALSSFIAEDLMLEGRRVIEIGAGVGMVSVTAARFGAGVLATDY HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCEEEECC STEALRFVRYNALLNRVSLETARLDWRSVMCSEQFDFLFAADVLYERVNLLPVVTAIDKL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKPDGVAYVADPRRRLAEQFLELAAENSFIITPELHEFRIGRPPVAVTIYRITRCQQLS HCCCCEEEECCHHHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCEEEEEEHHHHHCCC >Mature Secondary Structure MDRMLISADKQSREMAELYDALSGEYDLRESPFTFADQTFSFLSVLDSYALLDRITQEEF CCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VKDEQMPYWAEIWPAAIALSSFIAEDLMLEGRRVIEIGAGVGMVSVTAARFGAGVLATDY HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCEEEECC STEALRFVRYNALLNRVSLETARLDWRSVMCSEQFDFLFAADVLYERVNLLPVVTAIDKL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKPDGVAYVADPRRRLAEQFLELAAENSFIITPELHEFRIGRPPVAVTIYRITRCQQLS HCCCCEEEECCHHHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCEEEEEEHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA