| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356399
Identifier: 119356399
GI number: 119356399
Start: 630721
End: 631581
Strand: Direct
Name: 119356399
Synonym: Cpha266_0563
Alternate gene names: NA
Gene position: 630721-631581 (Clockwise)
Preceding gene: 119356398
Following gene: 119356400
Centisome position: 20.13
GC content: 50.29
Gene sequence:
>861_bases ATGAACAACGGAACCATGAGGTTTACACGCCGGTGGTCATTTCACGCGGGAGAGGGTGCGTTGGTATGGCAGCTTGTTTT TCCTCAAACGGGCGAGGTGGTTGGGCAGAAGCTTCTCCGTGAGAGCCGTCGTTCGCTCTTTTTCTCTCTTGATTCGGCAA CAGGGCGGGTGCTTTTTGACGATCTTCCTCTTATCGGCGATGATGGTTCTCTCAATACTCCGGACGGGTGGTATACCGGC ATTGAGACTACAGCTCACCATCTTGTATACTGTTATTGTTATCAACGGGAAAGTCCGGAACATCTCGGCCTGTGGGCGAT TGATCCGGGATCGGGACAGGTGGTCTGGGCGAGAAGGGATGTTGTTTTTGTCGCTAACCTTGAAGAGACATTTCTTGTCT ATACCCCGTCTTCTTTTGGCGGGTTTCCTGAACGTCACTATCTGCTTCTTGATCCTCTTGCTGGCAGTACGGTCAGAACG ATCGGGTTTGATAGCATGACGGCAAATGCGCTTCGACGTGAAATGACACCTGAAGAGGATCGCCAGGGGCTGTTATTGCC TCAATTCGTTTCGGAAGGTATGGTGGAGGAGACCCTTGCGCTTCGTCGTGCAGGCATTGATGCTCCGCAACATTGTGAAT GCATTGTGCTCGGGCCGCTTCTTGTGGCTGCAAGGTATGAGCCATCCTCCGTTTCCGGTCGATGGAATACCGTTCTCGGT GTCTGGTTTGATGCGGTTCGGGTCTATGAAGAGGTGATGGAGAAAGATGGAGAAAAACCCTGTTTGAACAATTTTCTCAT CAGGGACTTATCACTGTATTACATAAAAGAGAAAGAAGAACTGATTTCAGTCAGCCTATGA
Upstream 100 bases:
>100_bases AAAACAGCTTTATCATTACGCCTGAGTTGCATGAGTTCAGAATAGGCAGGCCTCCTGTCGCGGTGACTATCTATAGAATA ACAAGATGTCAGCAGTTGTC
Downstream 100 bases:
>100_bases AAAAGCACGATGCTTATGGCACCACGGATTCAGGAGAGGATGGGTGCTACAGGGAGGCGGAACGTTTTCTTGGCTATCTG AAAACCAGCAAAAATGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MNNGTMRFTRRWSFHAGEGALVWQLVFPQTGEVVGQKLLRESRRSLFFSLDSATGRVLFDDLPLIGDDGSLNTPDGWYTG IETTAHHLVYCYCYQRESPEHLGLWAIDPGSGQVVWARRDVVFVANLEETFLVYTPSSFGGFPERHYLLLDPLAGSTVRT IGFDSMTANALRREMTPEEDRQGLLLPQFVSEGMVEETLALRRAGIDAPQHCECIVLGPLLVAARYEPSSVSGRWNTVLG VWFDAVRVYEEVMEKDGEKPCLNNFLIRDLSLYYIKEKEELISVSL
Sequences:
>Translated_286_residues MNNGTMRFTRRWSFHAGEGALVWQLVFPQTGEVVGQKLLRESRRSLFFSLDSATGRVLFDDLPLIGDDGSLNTPDGWYTG IETTAHHLVYCYCYQRESPEHLGLWAIDPGSGQVVWARRDVVFVANLEETFLVYTPSSFGGFPERHYLLLDPLAGSTVRT IGFDSMTANALRREMTPEEDRQGLLLPQFVSEGMVEETLALRRAGIDAPQHCECIVLGPLLVAARYEPSSVSGRWNTVLG VWFDAVRVYEEVMEKDGEKPCLNNFLIRDLSLYYIKEKEELISVSL >Mature_286_residues MNNGTMRFTRRWSFHAGEGALVWQLVFPQTGEVVGQKLLRESRRSLFFSLDSATGRVLFDDLPLIGDDGSLNTPDGWYTG IETTAHHLVYCYCYQRESPEHLGLWAIDPGSGQVVWARRDVVFVANLEETFLVYTPSSFGGFPERHYLLLDPLAGSTVRT IGFDSMTANALRREMTPEEDRQGLLLPQFVSEGMVEETLALRRAGIDAPQHCECIVLGPLLVAARYEPSSVSGRWNTVLG VWFDAVRVYEEVMEKDGEKPCLNNFLIRDLSLYYIKEKEELISVSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32320; Mature: 32320
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNGTMRFTRRWSFHAGEGALVWQLVFPQTGEVVGQKLLRESRRSLFFSLDSATGRVLFD CCCCEEEEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHEEEEECCCCCEEEEE DLPLIGDDGSLNTPDGWYTGIETTAHHLVYCYCYQRESPEHLGLWAIDPGSGQVVWARRD CCCEECCCCCCCCCCCCCCCHHHCCCEEEEEEEECCCCCCCCEEEEECCCCCEEEEEECC VVFVANLEETFLVYTPSSFGGFPERHYLLLDPLAGSTVRTIGFDSMTANALRREMTPEED EEEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCCC RQGLLLPQFVSEGMVEETLALRRAGIDAPQHCECIVLGPLLVAARYEPSSVSGRWNTVLG CCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEECCCCCCCCCHHHHHH VWFDAVRVYEEVMEKDGEKPCLNNFLIRDLSLYYIKEKEELISVSL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEEECCHHEEEECC >Mature Secondary Structure MNNGTMRFTRRWSFHAGEGALVWQLVFPQTGEVVGQKLLRESRRSLFFSLDSATGRVLFD CCCCEEEEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHEEEEECCCCCEEEEE DLPLIGDDGSLNTPDGWYTGIETTAHHLVYCYCYQRESPEHLGLWAIDPGSGQVVWARRD CCCEECCCCCCCCCCCCCCCHHHCCCEEEEEEEECCCCCCCCEEEEECCCCCEEEEEECC VVFVANLEETFLVYTPSSFGGFPERHYLLLDPLAGSTVRTIGFDSMTANALRREMTPEED EEEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCCC RQGLLLPQFVSEGMVEETLALRRAGIDAPQHCECIVLGPLLVAARYEPSSVSGRWNTVLG CCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEECCCCCCCCCHHHHHH VWFDAVRVYEEVMEKDGEKPCLNNFLIRDLSLYYIKEKEELISVSL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEEECCHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA