| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is ppc [H]
Identifier: 119356395
GI number: 119356395
Start: 625602
End: 628370
Strand: Reverse
Name: ppc [H]
Synonym: Cpha266_0559
Alternate gene names: 119356395
Gene position: 628370-625602 (Counterclockwise)
Preceding gene: 119356397
Following gene: 119356394
Centisome position: 20.05
GC content: 51.68
Gene sequence:
>2769_bases ATGATCACCACGACAAGCAGCGTCATTAATTTTGAAAAAGCGGAAAGGGACTTCACCTTTCTGCTCCAGTGTTTTCAGGA AATGCTTCATGATCTGGGCGAAAAAGAGCTTGCCGAACATCTTCCGTGGAAACGGGCGTCCATGCGCCTCGATGATTATC CCGACATTGAGCGAGCCATACAGGCATACTCGATTTTTTTCCAACTGCTCAACATGGCAGAAGAAAACTCAGGCGCGCAG TATCGACGCACAATTGAAACAGAAAAAGGACTATCGGAGCTCAAGGGACTCTGGGGAAAAAACCTGCATCGGCTCAAAAA AAACGGCATAACCGAAGAGGAAATTTTGAGCGAACTATCGCGGGTCACCGTCGATGTCGCCCTGACAGCCCACCCCACCG AGGCAAAACGAAAAACCGTTCTTGAACAGCACCGCCAGCTCTACATTCTTCTGGTAAAACGTGAAAACCAGATGTGGACA CCACTTGAACAAGAGGATATCCGTAAAGAGATAAAGGTCGTCATGGAAAGATTGTGGCGAACCGGTGAGCTCCTGTACGA CAAACCGGCCGTATCGGCTGAACGCAGAAATATTGTTCACTACCTCTATAACATTTTTCCCGAAGTGCTGCCCATGCTTG ACAAACGGCTTCTTCACGCATGGCAGGAATGCGGGTTCGCTCCCGAAAAACTCGCAGACCCGCAAACGCTTCCCCTGCTT CGTTTTGGAAGCTGGGTTGGCGGCGACAGGGACGGCCACCCTCTTGTCACCGCAAAAGTAACCAGAGAGACCCTTCTGGA AATGCGTCGCAAAGCGCTTGCCCTGATCGCCTTTCATCTTACCAGGCTTGCCTCAAAGCTCAGCCTGTCTGAAAAACACC AGTTGCCCCCGGACGCACTGGAAGAAAGAATCAGAACGCTCGCCAACCATCTGGGAGAAGATGGCGAGGTGGCACTCATA AGAAACCGGCATGAGCCATGGCGCCAGTTCATAAATCTCATGATTGCATCCCTGCCGAAAAACCCCCGGAACGAACATGA CACAGGAAACCAGAACGACATATTCTCGTACGGTTCTTCGCGTGAGCTGCTCGACGACCTTGAGCTGTTGCGACAATCCC TGCTTAACGTAGGAGCCCGGCATATTGCCGATTCCGATGTGGCTCCGGTCTATCGCATTGTTCAGACTTTCGGCTTCCAT CTGGCATCACTCGATATCCGGCAAAACAGCGAGTTTCACGATCTGGCCCTCTCTCAGCTTATGAGCGCTGCCGGCTTGAA CGGAAGTGCATTTCTGACCTGGAATGAAGAAGAACGAACAGCCTTTCTTGACAGGGAGCTGCAATCACCCCGACCGTTCA CCCATCCCGATATGAAAGCCGGCCCTGAAGCCGAGGCGGTTCTCGACTGCTATCGGGTTCTTCTGGACCATTGCAAGGAG TATGGAAGCGAAGGAATAGGCTCCCTGATCGTCAGCATGACAAGAAATGCCTCCGATCTTCTTGTGGTCTATCTTTTTAT GAGAGAAGTCGGCCTGATGACCCCTTTCAAAGAGCACGATGCCTGTATGCTTCCCGTCGTCCCGCTCTTTGAAACCATTG AAGACCTTGAAAAAAGCCCTGATATCATGAGAACATTTCTCTCCCATCCGCTCACCCGGCGAACTCTTGGCATGCAGCAA GAGATGAACGGCTGGGAAAAACCGGCACAACAGGTGATGATCGGATACAGCGACAGCAACAAGGACGGAGGAATTTTTGC CAGTATCTGGAACCTGTACCGGGCACAGGAGTCGTTGCTTGAGGCCGGCAAAAAATCAGAAACAGAGATACTTTTCTTTC ATGGCCGAGGAGGAAGCATCAGCAGGGGCGCTGGCCCGACCCACCGGTTTTTGCGAGCCCAGCCTCACGGTTCATTCCAG GCGGGCATCCGCTTTACCGAACAGGGTGAAACAATTGCACAAAAATATGCAAACAGGATCAGTGCACTCTACAACCTCGA ACTCTTCATGGCGGGAGTAACCGGAGAGCTGCTGAAACACCGCAATAAAGAAAAAACAAGCCATGAACTTGAGCCGTTGA TGGATATGCTCTCACGGACAAGCAACCTTGCCTACCGCAGGCTGATCGAGGCAGAAGGGTTTATTGATTTTTTCAGGGAG GCAACGCCGATAGATATTATTGAGGCTACCCGGATAGGATCCCGTCCCTCAAGGCGTTCAGGGAAAAAAAGCCTTGCGGA TTTACGCGCAATCCCGTGGGTATTCAGCTGGAACCAGGCGAGGTTCTCCCTTTCAGGATGGTTCGGCATCGGCTCAGCAC TCGAACAGCTTCAGCATGAACATCCCGAAGCGTGCGACAACATTCGACGCCAGGATGCGTCATGGGCACCCCTCCGCTAC ATCATAAGCAATGCGGATGCAAGCCTTGCAACGGTCGATACCGAGATTATGAGAGAGTATGCCGCCCTTGTCGAAAACAG CGAACTCCGCTCAAGAATCTTCGGCATCATTGAAAACGAGTACCATAAAACCCGAACAATGATAGAGAGCCTCTATGGCG CGCATCTTGAAGAACAACGCCTCAATGTCTCCAGATTCATCTCCCTGCGTCAGGAAGGGCTCAGGGAGCTGCACCGCCAG CAGATCCGGCTGCTGAAAAAATGGCGGAAGCTGCACCAAACAGGACAGAACAAAAAAGCTGACAATCTGCTGGCAGAACT TTTTCTTACCGTCAATGCCATATCAGGAGGACTGAGAACCACCGGATGA
Upstream 100 bases:
>100_bases AAAAAAGAAAACACTGTTGCAGCTCTCCCGTTTTTTTCAAATACTGAACATAAAATTCAAGTCGCACTGAACTTTGCATC CGGTAACTCACAGACAAACC
Downstream 100 bases:
>100_bases TCCTCCGACCGGCCTTAAAAACCTTGCCAATGCCGGACAGCAGATCCTGCATTGGCAAAAAGTTGATGAACCTGTTATTT TTTTGGTACTTTCAAAGAAG
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 922; Mature: 922
Protein sequence:
>922_residues MITTTSSVINFEKAERDFTFLLQCFQEMLHDLGEKELAEHLPWKRASMRLDDYPDIERAIQAYSIFFQLLNMAEENSGAQ YRRTIETEKGLSELKGLWGKNLHRLKKNGITEEEILSELSRVTVDVALTAHPTEAKRKTVLEQHRQLYILLVKRENQMWT PLEQEDIRKEIKVVMERLWRTGELLYDKPAVSAERRNIVHYLYNIFPEVLPMLDKRLLHAWQECGFAPEKLADPQTLPLL RFGSWVGGDRDGHPLVTAKVTRETLLEMRRKALALIAFHLTRLASKLSLSEKHQLPPDALEERIRTLANHLGEDGEVALI RNRHEPWRQFINLMIASLPKNPRNEHDTGNQNDIFSYGSSRELLDDLELLRQSLLNVGARHIADSDVAPVYRIVQTFGFH LASLDIRQNSEFHDLALSQLMSAAGLNGSAFLTWNEEERTAFLDRELQSPRPFTHPDMKAGPEAEAVLDCYRVLLDHCKE YGSEGIGSLIVSMTRNASDLLVVYLFMREVGLMTPFKEHDACMLPVVPLFETIEDLEKSPDIMRTFLSHPLTRRTLGMQQ EMNGWEKPAQQVMIGYSDSNKDGGIFASIWNLYRAQESLLEAGKKSETEILFFHGRGGSISRGAGPTHRFLRAQPHGSFQ AGIRFTEQGETIAQKYANRISALYNLELFMAGVTGELLKHRNKEKTSHELEPLMDMLSRTSNLAYRRLIEAEGFIDFFRE ATPIDIIEATRIGSRPSRRSGKKSLADLRAIPWVFSWNQARFSLSGWFGIGSALEQLQHEHPEACDNIRRQDASWAPLRY IISNADASLATVDTEIMREYAALVENSELRSRIFGIIENEYHKTRTMIESLYGAHLEEQRLNVSRFISLRQEGLRELHRQ QIRLLKKWRKLHQTGQNKKADNLLAELFLTVNAISGGLRTTG
Sequences:
>Translated_922_residues MITTTSSVINFEKAERDFTFLLQCFQEMLHDLGEKELAEHLPWKRASMRLDDYPDIERAIQAYSIFFQLLNMAEENSGAQ YRRTIETEKGLSELKGLWGKNLHRLKKNGITEEEILSELSRVTVDVALTAHPTEAKRKTVLEQHRQLYILLVKRENQMWT PLEQEDIRKEIKVVMERLWRTGELLYDKPAVSAERRNIVHYLYNIFPEVLPMLDKRLLHAWQECGFAPEKLADPQTLPLL RFGSWVGGDRDGHPLVTAKVTRETLLEMRRKALALIAFHLTRLASKLSLSEKHQLPPDALEERIRTLANHLGEDGEVALI RNRHEPWRQFINLMIASLPKNPRNEHDTGNQNDIFSYGSSRELLDDLELLRQSLLNVGARHIADSDVAPVYRIVQTFGFH LASLDIRQNSEFHDLALSQLMSAAGLNGSAFLTWNEEERTAFLDRELQSPRPFTHPDMKAGPEAEAVLDCYRVLLDHCKE YGSEGIGSLIVSMTRNASDLLVVYLFMREVGLMTPFKEHDACMLPVVPLFETIEDLEKSPDIMRTFLSHPLTRRTLGMQQ EMNGWEKPAQQVMIGYSDSNKDGGIFASIWNLYRAQESLLEAGKKSETEILFFHGRGGSISRGAGPTHRFLRAQPHGSFQ AGIRFTEQGETIAQKYANRISALYNLELFMAGVTGELLKHRNKEKTSHELEPLMDMLSRTSNLAYRRLIEAEGFIDFFRE ATPIDIIEATRIGSRPSRRSGKKSLADLRAIPWVFSWNQARFSLSGWFGIGSALEQLQHEHPEACDNIRRQDASWAPLRY IISNADASLATVDTEIMREYAALVENSELRSRIFGIIENEYHKTRTMIESLYGAHLEEQRLNVSRFISLRQEGLRELHRQ QIRLLKKWRKLHQTGQNKKADNLLAELFLTVNAISGGLRTTG >Mature_922_residues MITTTSSVINFEKAERDFTFLLQCFQEMLHDLGEKELAEHLPWKRASMRLDDYPDIERAIQAYSIFFQLLNMAEENSGAQ YRRTIETEKGLSELKGLWGKNLHRLKKNGITEEEILSELSRVTVDVALTAHPTEAKRKTVLEQHRQLYILLVKRENQMWT PLEQEDIRKEIKVVMERLWRTGELLYDKPAVSAERRNIVHYLYNIFPEVLPMLDKRLLHAWQECGFAPEKLADPQTLPLL RFGSWVGGDRDGHPLVTAKVTRETLLEMRRKALALIAFHLTRLASKLSLSEKHQLPPDALEERIRTLANHLGEDGEVALI RNRHEPWRQFINLMIASLPKNPRNEHDTGNQNDIFSYGSSRELLDDLELLRQSLLNVGARHIADSDVAPVYRIVQTFGFH LASLDIRQNSEFHDLALSQLMSAAGLNGSAFLTWNEEERTAFLDRELQSPRPFTHPDMKAGPEAEAVLDCYRVLLDHCKE YGSEGIGSLIVSMTRNASDLLVVYLFMREVGLMTPFKEHDACMLPVVPLFETIEDLEKSPDIMRTFLSHPLTRRTLGMQQ EMNGWEKPAQQVMIGYSDSNKDGGIFASIWNLYRAQESLLEAGKKSETEILFFHGRGGSISRGAGPTHRFLRAQPHGSFQ AGIRFTEQGETIAQKYANRISALYNLELFMAGVTGELLKHRNKEKTSHELEPLMDMLSRTSNLAYRRLIEAEGFIDFFRE ATPIDIIEATRIGSRPSRRSGKKSLADLRAIPWVFSWNQARFSLSGWFGIGSALEQLQHEHPEACDNIRRQDASWAPLRY IISNADASLATVDTEIMREYAALVENSELRSRIFGIIENEYHKTRTMIESLYGAHLEEQRLNVSRFISLRQEGLRELHRQ QIRLLKKWRKLHQTGQNKKADNLLAELFLTVNAISGGLRTTG
Specific function: Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=868, Percent_Identity=30.4147465437788, Blast_Score=304, Evalue=2e-83,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 105728; Mature: 105728
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITTTSSVINFEKAERDFTFLLQCFQEMLHDLGEKELAEHLPWKRASMRLDDYPDIERAI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHCCCCCCCCCHHHHH QAYSIFFQLLNMAEENSGAQYRRTIETEKGLSELKGLWGKNLHRLKKNGITEEEILSELS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RVTVDVALTAHPTEAKRKTVLEQHRQLYILLVKRENQMWTPLEQEDIRKEIKVVMERLWR HHEEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH TGELLYDKPAVSAERRNIVHYLYNIFPEVLPMLDKRLLHAWQECGFAPEKLADPQTLPLL CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHH RFGSWVGGDRDGHPLVTAKVTRETLLEMRRKALALIAFHLTRLASKLSLSEKHQLPPDAL HHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHH EERIRTLANHLGEDGEVALIRNRHEPWRQFINLMIASLPKNPRNEHDTGNQNDIFSYGSS HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCC RELLDDLELLRQSLLNVGARHIADSDVAPVYRIVQTFGFHLASLDIRQNSEFHDLALSQL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH MSAAGLNGSAFLTWNEEERTAFLDRELQSPRPFTHPDMKAGPEAEAVLDCYRVLLDHCKE HHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH YGSEGIGSLIVSMTRNASDLLVVYLFMREVGLMTPFKEHDACMLPVVPLFETIEDLEKSP HCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHCCH DIMRTFLSHPLTRRTLGMQQEMNGWEKPAQQVMIGYSDSNKDGGIFASIWNLYRAQESLL HHHHHHHHCCHHHHHHCHHHHHCHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHH EAGKKSETEILFFHGRGGSISRGAGPTHRFLRAQPHGSFQAGIRFTEQGETIAQKYANRI HCCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCHHHCCEECCCCHHHHHHHHHHH SALYNLELFMAGVTGELLKHRNKEKTSHELEPLMDMLSRTSNLAYRRLIEAEGFIDFFRE HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ATPIDIIEATRIGSRPSRRSGKKSLADLRAIPWVFSWNQARFSLSGWFGIGSALEQLQHE CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEECCCCEEEECHHHHHHHHHHHHHHC HPEACDNIRRQDASWAPLRYIISNADASLATVDTEIMREYAALVENSELRSRIFGIIENE CCHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH YHKTRTMIESLYGAHLEEQRLNVSRFISLRQEGLRELHRQQIRLLKKWRKLHQTGQNKKA HHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH DNLLAELFLTVNAISGGLRTTG HHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MITTTSSVINFEKAERDFTFLLQCFQEMLHDLGEKELAEHLPWKRASMRLDDYPDIERAI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHCCCCCCCCCHHHHH QAYSIFFQLLNMAEENSGAQYRRTIETEKGLSELKGLWGKNLHRLKKNGITEEEILSELS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RVTVDVALTAHPTEAKRKTVLEQHRQLYILLVKRENQMWTPLEQEDIRKEIKVVMERLWR HHEEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH TGELLYDKPAVSAERRNIVHYLYNIFPEVLPMLDKRLLHAWQECGFAPEKLADPQTLPLL CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHH RFGSWVGGDRDGHPLVTAKVTRETLLEMRRKALALIAFHLTRLASKLSLSEKHQLPPDAL HHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHH EERIRTLANHLGEDGEVALIRNRHEPWRQFINLMIASLPKNPRNEHDTGNQNDIFSYGSS HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCC RELLDDLELLRQSLLNVGARHIADSDVAPVYRIVQTFGFHLASLDIRQNSEFHDLALSQL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH MSAAGLNGSAFLTWNEEERTAFLDRELQSPRPFTHPDMKAGPEAEAVLDCYRVLLDHCKE HHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH YGSEGIGSLIVSMTRNASDLLVVYLFMREVGLMTPFKEHDACMLPVVPLFETIEDLEKSP HCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHCCH DIMRTFLSHPLTRRTLGMQQEMNGWEKPAQQVMIGYSDSNKDGGIFASIWNLYRAQESLL HHHHHHHHCCHHHHHHCHHHHHCHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHH EAGKKSETEILFFHGRGGSISRGAGPTHRFLRAQPHGSFQAGIRFTEQGETIAQKYANRI HCCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCHHHCCEECCCCHHHHHHHHHHH SALYNLELFMAGVTGELLKHRNKEKTSHELEPLMDMLSRTSNLAYRRLIEAEGFIDFFRE HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ATPIDIIEATRIGSRPSRRSGKKSLADLRAIPWVFSWNQARFSLSGWFGIGSALEQLQHE CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEECCCCEEEECHHHHHHHHHHHHHHC HPEACDNIRRQDASWAPLRYIISNADASLATVDTEIMREYAALVENSELRSRIFGIIENE CCHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH YHKTRTMIESLYGAHLEEQRLNVSRFISLRQEGLRELHRQQIRLLKKWRKLHQTGQNKKA HHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH DNLLAELFLTVNAISGGLRTTG HHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9168622; 7961516 [H]