| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is leuS
Identifier: 119356387
GI number: 119356387
Start: 612695
End: 615145
Strand: Reverse
Name: leuS
Synonym: Cpha266_0551
Alternate gene names: 119356387
Gene position: 615145-612695 (Counterclockwise)
Preceding gene: 119356388
Following gene: 119356386
Centisome position: 19.63
GC content: 47.08
Gene sequence:
>2451_bases ATGCGTTACGATTTTTCAACGATCGAAAAAAAATGGCAGTCTTTCTGGCTGAAAAACAACTCCTTTTCTTCAGGTGAAAG CACTGATAAACCAAAATACTATGTCCTCGACATGTTCCCCTATCCAAGCGGATCGGGACTTCACGTAGGACACCTTGAAG GGTACACGGCTACCGACATCGTAGCCAGATACAAACGCAGTTGCGGATATAATGTTCTGCACCCGATGGGATGGGATGCC TTCGGGCTTCCGGCAGAACAGTTTGCCATCAAAACCGGAACACATCCAAAAAATACTACTGAAAAAAATATCAGCAGTTT CAGGGAAACACTGCAGGCAATGGGTTTTTCCTATGATTGGTCGCGAGAAATCAATACGACCAGCCCGGATTATTTCAGAT GGACACAATGGATCTTTATCAAATTGTATGAACTGGGTCTCGCATACGTTTCGGAGGTAGACATTAACTGGTGCGAAGAG TTGAAAACAGTTCTGGCTAATGAGGAGGTAGAGGAAAAGGTGAAGGAGGGGTACACGGTTATCCGTAAACCGCTGCGCCA GTGGGTACTGAAAATTACCGCCTATGCCGAAAGGCTTCTCGACGACCTTGACGAACTCGACTGGCCTGAAAATGTCAAAC AGATGCAGCGCAACTGGATCGGACGTTCCGAAGGCATGGAAATTGATTTCGAACTTCGCTGCCACAACCGTAAATTGAGG GTCTATACAACCAGACCTGACACTCTTTTCGGTGCAACCTTTCTGGTAATTTCCCCTGAACACCCCCTTGCCTTGAAGCT GGCAACGGCACAGCAGCTCGTTGCCGTAACACAATACATCAAAGAGGCTAAATTGAAGTCCGAACTGGAACGGACAGGTC TGCAAAAAGATAAAACCGGCATCTTTACAGGTTCCTTTGCCATCAATCCTGCAACGGGCGACCCTCTGCCTGTATGGATC TCCGACTTCGTTCTGACCAGTTATGGCACTGGAGCAATCATGTCAGTACCAGCTCATGACAGCAGGGACTGGGAGTTCGC AAAGAAATTCGGGTTACCCATAATCGAGGTCATCAAAAGCCCTGATGGTGTTGACGATGCTGCGTTTGAAGGAAAGGAGA GCGTCTCAATCAATTCATCGAACCCGGAAATCAGTATTGACGGACTCCATTTCAGCGAAGCATTTCAAATTATGGCCCAC TGGCTGGAGACAAAAGGGCTTGGTGAACGCAAAGTCACCTACAAACTTCGAGACTGGATATTCAGCCGGCAACGTTACTG GGGTGAACCGATTCCTGTAAAACATTATGAAGATGGCTCAATCCGAACAGAAAGCAATCTGCCGCTCCAGCTTCCTGAAG TCGAAGCCTATCAACCCTCGGAAACAGGTGAATCGCCGCTTGCAACCATGCATGATTGGCTCTATGGTGCTGATGAATTC GGATCATTCAGAAGAGAGACCAACACCATGCCCCAATGGGCCGGAAGCTGCTGGTACTACCTGCGCTTTATCGATCCGGA AAATAATGCGCAGCTTATTGACCCGGCGAAAGAAAAGTACTGGATGAATGTCGATCTCTATATCGGAGGTGCGGAACATG CCGTTCTGCATCTGCTCTATGCTCGATTCTGGCACAAGGTACTCTACGATCTCGGGGTCGTGAGCAGCAGAGAACCATTT AAAAAACTCTTCAATCAGGGAATGATTCTTGGTGAAGACAATGAAAAAATGTCCAAATCACGAGGGAACGTCATCCCTGC TGACCAGGTGCTGAAAGACTACGGGGCAGATGCTGTCCGGCTCTATGAAATGTTTCTCGGCCCTCTCGAACAGGTAAAAC CATGGAATACCAATGGTATAGAAGGCATAAGCCGTTTTCTTGGAAAAGTCTGGAGACTTGTTTATCCGGATTCAGAAAAT CCAGACCAAAGAGATCAGGCAGCTGTACTTGATGAAAACCCGTTGCCCGAAATACTGCAACGCAGAATGCATAAAACCAT CAAAAAAGTTACTGAAGACACTGATCATCTCAAATTCAATACCGCCATCTCTGAAATGATGGTATTTGTCAATGAACTGC AGAAAAACGGGTGCCGTCAGAAAAGCGCCGTCGAAAACCTGCTCCTCATGCTTGCACCATATGCGCCGCATATCACAGCA GAGCTCTGGCAGGCAATAGGCCATACATCGCCAATCAGCGCAGAACCGTTTCCCGTATTTGATCCTGCAATTGCCGAAGA CCCTGTTGTGACCATAGCCGTACAGGTCAACGGAAAACTCAGAGGCAGGTTTACGGCTCCGGCAAAAAGCCCTGAAGAAT CACTTGTTGACATGGCAAAACACGTTGATACCGTTATTAAATTTCTGGAAGGACAGACGATTGTCAAAGAAATTGTCATC CAGGACAAACTTGTAAATTTCGCTGTAAAACAATCAATTCCAAACCATTGA
Upstream 100 bases:
>100_bases CTGGCACAGAAGGAAACTGACCGGTTAATCACAAAAAAAGCAGTGCAGGAAATCCTGCACTGCTTTTTTTATAAAATAAA ATGCACGACATCAAGAGCAT
Downstream 100 bases:
>100_bases AATCGGGCAGCCCCGGTGTAACGATTATTGAAATGTCCATTTATTTTATGTAAACTGAAGGTTACAATTATCGACTGCCC TTTCGGCTTGTTCCTTATCC
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS
Number of amino acids: Translated: 816; Mature: 816
Protein sequence:
>816_residues MRYDFSTIEKKWQSFWLKNNSFSSGESTDKPKYYVLDMFPYPSGSGLHVGHLEGYTATDIVARYKRSCGYNVLHPMGWDA FGLPAEQFAIKTGTHPKNTTEKNISSFRETLQAMGFSYDWSREINTTSPDYFRWTQWIFIKLYELGLAYVSEVDINWCEE LKTVLANEEVEEKVKEGYTVIRKPLRQWVLKITAYAERLLDDLDELDWPENVKQMQRNWIGRSEGMEIDFELRCHNRKLR VYTTRPDTLFGATFLVISPEHPLALKLATAQQLVAVTQYIKEAKLKSELERTGLQKDKTGIFTGSFAINPATGDPLPVWI SDFVLTSYGTGAIMSVPAHDSRDWEFAKKFGLPIIEVIKSPDGVDDAAFEGKESVSINSSNPEISIDGLHFSEAFQIMAH WLETKGLGERKVTYKLRDWIFSRQRYWGEPIPVKHYEDGSIRTESNLPLQLPEVEAYQPSETGESPLATMHDWLYGADEF GSFRRETNTMPQWAGSCWYYLRFIDPENNAQLIDPAKEKYWMNVDLYIGGAEHAVLHLLYARFWHKVLYDLGVVSSREPF KKLFNQGMILGEDNEKMSKSRGNVIPADQVLKDYGADAVRLYEMFLGPLEQVKPWNTNGIEGISRFLGKVWRLVYPDSEN PDQRDQAAVLDENPLPEILQRRMHKTIKKVTEDTDHLKFNTAISEMMVFVNELQKNGCRQKSAVENLLLMLAPYAPHITA ELWQAIGHTSPISAEPFPVFDPAIAEDPVVTIAVQVNGKLRGRFTAPAKSPEESLVDMAKHVDTVIKFLEGQTIVKEIVI QDKLVNFAVKQSIPNH
Sequences:
>Translated_816_residues MRYDFSTIEKKWQSFWLKNNSFSSGESTDKPKYYVLDMFPYPSGSGLHVGHLEGYTATDIVARYKRSCGYNVLHPMGWDA FGLPAEQFAIKTGTHPKNTTEKNISSFRETLQAMGFSYDWSREINTTSPDYFRWTQWIFIKLYELGLAYVSEVDINWCEE LKTVLANEEVEEKVKEGYTVIRKPLRQWVLKITAYAERLLDDLDELDWPENVKQMQRNWIGRSEGMEIDFELRCHNRKLR VYTTRPDTLFGATFLVISPEHPLALKLATAQQLVAVTQYIKEAKLKSELERTGLQKDKTGIFTGSFAINPATGDPLPVWI SDFVLTSYGTGAIMSVPAHDSRDWEFAKKFGLPIIEVIKSPDGVDDAAFEGKESVSINSSNPEISIDGLHFSEAFQIMAH WLETKGLGERKVTYKLRDWIFSRQRYWGEPIPVKHYEDGSIRTESNLPLQLPEVEAYQPSETGESPLATMHDWLYGADEF GSFRRETNTMPQWAGSCWYYLRFIDPENNAQLIDPAKEKYWMNVDLYIGGAEHAVLHLLYARFWHKVLYDLGVVSSREPF KKLFNQGMILGEDNEKMSKSRGNVIPADQVLKDYGADAVRLYEMFLGPLEQVKPWNTNGIEGISRFLGKVWRLVYPDSEN PDQRDQAAVLDENPLPEILQRRMHKTIKKVTEDTDHLKFNTAISEMMVFVNELQKNGCRQKSAVENLLLMLAPYAPHITA ELWQAIGHTSPISAEPFPVFDPAIAEDPVVTIAVQVNGKLRGRFTAPAKSPEESLVDMAKHVDTVIKFLEGQTIVKEIVI QDKLVNFAVKQSIPNH >Mature_816_residues MRYDFSTIEKKWQSFWLKNNSFSSGESTDKPKYYVLDMFPYPSGSGLHVGHLEGYTATDIVARYKRSCGYNVLHPMGWDA FGLPAEQFAIKTGTHPKNTTEKNISSFRETLQAMGFSYDWSREINTTSPDYFRWTQWIFIKLYELGLAYVSEVDINWCEE LKTVLANEEVEEKVKEGYTVIRKPLRQWVLKITAYAERLLDDLDELDWPENVKQMQRNWIGRSEGMEIDFELRCHNRKLR VYTTRPDTLFGATFLVISPEHPLALKLATAQQLVAVTQYIKEAKLKSELERTGLQKDKTGIFTGSFAINPATGDPLPVWI SDFVLTSYGTGAIMSVPAHDSRDWEFAKKFGLPIIEVIKSPDGVDDAAFEGKESVSINSSNPEISIDGLHFSEAFQIMAH WLETKGLGERKVTYKLRDWIFSRQRYWGEPIPVKHYEDGSIRTESNLPLQLPEVEAYQPSETGESPLATMHDWLYGADEF GSFRRETNTMPQWAGSCWYYLRFIDPENNAQLIDPAKEKYWMNVDLYIGGAEHAVLHLLYARFWHKVLYDLGVVSSREPF KKLFNQGMILGEDNEKMSKSRGNVIPADQVLKDYGADAVRLYEMFLGPLEQVKPWNTNGIEGISRFLGKVWRLVYPDSEN PDQRDQAAVLDENPLPEILQRRMHKTIKKVTEDTDHLKFNTAISEMMVFVNELQKNGCRQKSAVENLLLMLAPYAPHITA ELWQAIGHTSPISAEPFPVFDPAIAEDPVVTIAVQVNGKLRGRFTAPAKSPEESLVDMAKHVDTVIKFLEGQTIVKEIVI QDKLVNFAVKQSIPNH
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI7661872, Length=884, Percent_Identity=32.9185520361991, Blast_Score=446, Evalue=1e-125, Organism=Homo sapiens, GI94721239, Length=192, Percent_Identity=28.125, Blast_Score=73, Evalue=9e-13, Organism=Homo sapiens, GI94721241, Length=192, Percent_Identity=28.125, Blast_Score=73, Evalue=9e-13, Organism=Escherichia coli, GI1786861, Length=871, Percent_Identity=41.5614236509759, Blast_Score=625, Evalue=1e-180, Organism=Caenorhabditis elegans, GI71997517, Length=836, Percent_Identity=28.7081339712919, Blast_Score=289, Evalue=5e-78, Organism=Caenorhabditis elegans, GI71997510, Length=836, Percent_Identity=28.7081339712919, Blast_Score=289, Evalue=5e-78, Organism=Caenorhabditis elegans, GI212645227, Length=352, Percent_Identity=27.2727272727273, Blast_Score=115, Evalue=8e-26, Organism=Caenorhabditis elegans, GI17510661, Length=853, Percent_Identity=21.3364595545135, Blast_Score=102, Evalue=6e-22, Organism=Saccharomyces cerevisiae, GI6323414, Length=873, Percent_Identity=33.1042382588774, Blast_Score=431, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6321531, Length=386, Percent_Identity=25.1295336787565, Blast_Score=99, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6325217, Length=357, Percent_Identity=24.6498599439776, Blast_Score=75, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6319395, Length=214, Percent_Identity=28.5046728971963, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI21355409, Length=862, Percent_Identity=31.6705336426914, Blast_Score=372, Evalue=1e-103, Organism=Drosophila melanogaster, GI28574730, Length=181, Percent_Identity=29.2817679558011, Blast_Score=67, Evalue=7e-11, Organism=Drosophila melanogaster, GI24668547, Length=181, Percent_Identity=29.2817679558011, Blast_Score=67, Evalue=7e-11, Organism=Drosophila melanogaster, GI24668543, Length=181, Percent_Identity=29.2817679558011, Blast_Score=67, Evalue=7e-11,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYL_CHLPD (A1BDY0)
Other databases:
- EMBL: CP000492 - RefSeq: YP_911031.1 - ProteinModelPortal: A1BDY0 - SMR: A1BDY0 - STRING: A1BDY0 - GeneID: 4569418 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_0551 - NMPDR: fig|290317.7.peg.576 - eggNOG: COG0495 - HOGENOM: HBG693845 - OMA: ERGNFPV - ProtClustDB: PRK00390 - GO: GO:0005737 - HAMAP: MF_00049_B - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR11946:SF7 - PRINTS: PR00985 - TIGRFAMs: TIGR00396
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1; SSF47323 tRNAsyn_1a_bind; SSF50677 ValRS_IleRS_edit
EC number: =6.1.1.4
Molecular weight: Translated: 93336; Mature: 93336
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 579-579
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYDFSTIEKKWQSFWLKNNSFSSGESTDKPKYYVLDMFPYPSGSGLHVGHLEGYTATDI CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCHHHHH VARYKRSCGYNVLHPMGWDAFGLPAEQFAIKTGTHPKNTTEKNISSFRETLQAMGFSYDW HHHHHHHCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC SREINTTSPDYFRWTQWIFIKLYELGLAYVSEVDINWCEELKTVLANEEVEEKVKEGYTV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH IRKPLRQWVLKITAYAERLLDDLDELDWPENVKQMQRNWIGRSEGMEIDFELRCHNRKLR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCEEE VYTTRPDTLFGATFLVISPEHPLALKLATAQQLVAVTQYIKEAKLKSELERTGLQKDKTG EEECCCCCEECCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC IFTGSFAINPATGDPLPVWISDFVLTSYGTGAIMSVPAHDSRDWEFAKKFGLPIIEVIKS EEECCEEECCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHCCHHHHHHCC PDGVDDAAFEGKESVSINSSNPEISIDGLHFSEAFQIMAHWLETKGLGERKVTYKLRDWI CCCCCHHHCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FSRQRYWGEPIPVKHYEDGSIRTESNLPLQLPEVEAYQPSETGESPLATMHDWLYGADEF HHHHHHCCCCCCCEECCCCCEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHH GSFRRETNTMPQWAGSCWYYLRFIDPENNAQLIDPAKEKYWMNVDLYIGGAEHAVLHLLY HHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCEEEEEEEEECCHHHHHHHHHH ARFWHKVLYDLGVVSSREPFKKLFNQGMILGEDNEKMSKSRGNVIPADQVLKDYGADAVR HHHHHHHHHHHCCCCCCHHHHHHHHCCCEECCCCHHHHHHCCCCCCHHHHHHHHCCHHHH LYEMFLGPLEQVKPWNTNGIEGISRFLGKVWRLVYPDSENPDQRDQAAVLDENPLPEILQ HHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCHHHCCCCCCCHHHHH RRMHKTIKKVTEDTDHLKFNTAISEMMVFVNELQKNGCRQKSAVENLLLMLAPYAPHITA HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHH ELWQAIGHTSPISAEPFPVFDPAIAEDPVVTIAVQVNGKLRGRFTAPAKSPEESLVDMAK HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEECCCCCHHHHHHHHHH HVDTVIKFLEGQTIVKEIVIQDKLVNFAVKQSIPNH HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRYDFSTIEKKWQSFWLKNNSFSSGESTDKPKYYVLDMFPYPSGSGLHVGHLEGYTATDI CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCHHHHH VARYKRSCGYNVLHPMGWDAFGLPAEQFAIKTGTHPKNTTEKNISSFRETLQAMGFSYDW HHHHHHHCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC SREINTTSPDYFRWTQWIFIKLYELGLAYVSEVDINWCEELKTVLANEEVEEKVKEGYTV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH IRKPLRQWVLKITAYAERLLDDLDELDWPENVKQMQRNWIGRSEGMEIDFELRCHNRKLR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCEEE VYTTRPDTLFGATFLVISPEHPLALKLATAQQLVAVTQYIKEAKLKSELERTGLQKDKTG EEECCCCCEECCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC IFTGSFAINPATGDPLPVWISDFVLTSYGTGAIMSVPAHDSRDWEFAKKFGLPIIEVIKS EEECCEEECCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHCCHHHHHHCC PDGVDDAAFEGKESVSINSSNPEISIDGLHFSEAFQIMAHWLETKGLGERKVTYKLRDWI CCCCCHHHCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FSRQRYWGEPIPVKHYEDGSIRTESNLPLQLPEVEAYQPSETGESPLATMHDWLYGADEF HHHHHHCCCCCCCEECCCCCEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHH GSFRRETNTMPQWAGSCWYYLRFIDPENNAQLIDPAKEKYWMNVDLYIGGAEHAVLHLLY HHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCEEEEEEEEECCHHHHHHHHHH ARFWHKVLYDLGVVSSREPFKKLFNQGMILGEDNEKMSKSRGNVIPADQVLKDYGADAVR HHHHHHHHHHHCCCCCCHHHHHHHHCCCEECCCCHHHHHHCCCCCCHHHHHHHHCCHHHH LYEMFLGPLEQVKPWNTNGIEGISRFLGKVWRLVYPDSENPDQRDQAAVLDENPLPEILQ HHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCHHHCCCCCCCHHHHH RRMHKTIKKVTEDTDHLKFNTAISEMMVFVNELQKNGCRQKSAVENLLLMLAPYAPHITA HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHH ELWQAIGHTSPISAEPFPVFDPAIAEDPVVTIAVQVNGKLRGRFTAPAKSPEESLVDMAK HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEECCCCCHHHHHHHHHH HVDTVIKFLEGQTIVKEIVIQDKLVNFAVKQSIPNH HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA