| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356353
Identifier: 119356353
GI number: 119356353
Start: 565905
End: 566627
Strand: Reverse
Name: 119356353
Synonym: Cpha266_0516
Alternate gene names: NA
Gene position: 566627-565905 (Counterclockwise)
Preceding gene: 119356354
Following gene: 119356345
Centisome position: 18.08
GC content: 43.98
Gene sequence:
>723_bases ATGATGAAAGAAACTCTTGAAAAAACAGGTCATGAAAAAACAGATCCCGCATGCCAGCTCTGCGGAAACAAAAAAACCAG CCAGCTTAAAAGAGCCATCTTTGTAGGACCTTCAGTCGCACAAGTCATTATAAAAGAGACCGGAGGATGGGATGAAACCG GGTGGATCTGTAGTGATGATTTCCTCAAATACCAGCAGAAATATGTCGAAAAACTCCTTGCGGAAGAAAAAGGGGAACTG ACCACACTTGACAGGGAGGTTCTCAGGGCACTGCATGAACAGGAGATCTTTTCAAAAAACCCCGACATCGACTATGATGC CAATCTTGGTTTCGCAGACCGCTTGTCCGATAAGCTTGCTTCGTTTGGCGGCAGTTGGACATTCATCATCATGTTCGGCT TTTTTATTTTCGGATGGATGGCCATCAACACATGGATACTTTTCTCAAAACCCTTTGATCCATTTCCCTTTATACTCCTG AACCTTGTACTCTCTTCCCTTGCGGCCATACAGGCTCCCGTCATCATGATGAGCCAAAATCGACAGGAAGCACGTGACCG GAAAAGGGCTATCCATGACTATCAGATCAACCTTAAGGCAGAACTCGAAATCAGGCAACTCCACCAGAAAATCGATCATA TTCTCTCTCATCAATGGGAAAGACTGATAGAAATACAGAAAATCCAGATGGAATTGATCGATGAAATCCGTAACAACAAC TAA
Upstream 100 bases:
>100_bases ACACTCCCATACCGGAAGATACCTTGCTGTCGAACTGGAGGCAAAACACTCACCCGAGCTACCCGAACAAGGGATTCAAA ACCCGATTTCCGAATGAATC
Downstream 100 bases:
>100_bases AGCAAACCTCTGCTAACCGTCGTCGTAAACCTCGACAAATTCAGGCAACCTTATCGCAACAACGCTTATCAGAGGCACCC CGATCTGACCGAAATGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MMKETLEKTGHEKTDPACQLCGNKKTSQLKRAIFVGPSVAQVIIKETGGWDETGWICSDDFLKYQQKYVEKLLAEEKGEL TTLDREVLRALHEQEIFSKNPDIDYDANLGFADRLSDKLASFGGSWTFIIMFGFFIFGWMAINTWILFSKPFDPFPFILL NLVLSSLAAIQAPVIMMSQNRQEARDRKRAIHDYQINLKAELEIRQLHQKIDHILSHQWERLIEIQKIQMELIDEIRNNN
Sequences:
>Translated_240_residues MMKETLEKTGHEKTDPACQLCGNKKTSQLKRAIFVGPSVAQVIIKETGGWDETGWICSDDFLKYQQKYVEKLLAEEKGEL TTLDREVLRALHEQEIFSKNPDIDYDANLGFADRLSDKLASFGGSWTFIIMFGFFIFGWMAINTWILFSKPFDPFPFILL NLVLSSLAAIQAPVIMMSQNRQEARDRKRAIHDYQINLKAELEIRQLHQKIDHILSHQWERLIEIQKIQMELIDEIRNNN >Mature_240_residues MMKETLEKTGHEKTDPACQLCGNKKTSQLKRAIFVGPSVAQVIIKETGGWDETGWICSDDFLKYQQKYVEKLLAEEKGEL TTLDREVLRALHEQEIFSKNPDIDYDANLGFADRLSDKLASFGGSWTFIIMFGFFIFGWMAINTWILFSKPFDPFPFILL NLVLSSLAAIQAPVIMMSQNRQEARDRKRAIHDYQINLKAELEIRQLHQKIDHILSHQWERLIEIQKIQMELIDEIRNNN
Specific function: Unknown
COG id: COG4420
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27893; Mature: 27893
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKETLEKTGHEKTDPACQLCGNKKTSQLKRAIFVGPSVAQVIIKETGGWDETGWICSDD CCHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEECHH FLKYQQKYVEKLLAEEKGELTTLDREVLRALHEQEIFSKNPDIDYDANLGFADRLSDKLA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH SFGGSWTFIIMFGFFIFGWMAINTWILFSKPFDPFPFILLNLVLSSLAAIQAPVIMMSQN HCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC RQEARDRKRAIHDYQINLKAELEIRQLHQKIDHILSHQWERLIEIQKIQMELIDEIRNNN HHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMKETLEKTGHEKTDPACQLCGNKKTSQLKRAIFVGPSVAQVIIKETGGWDETGWICSDD CCHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEECHH FLKYQQKYVEKLLAEEKGELTTLDREVLRALHEQEIFSKNPDIDYDANLGFADRLSDKLA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH SFGGSWTFIIMFGFFIFGWMAINTWILFSKPFDPFPFILLNLVLSSLAAIQAPVIMMSQN HCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC RQEARDRKRAIHDYQINLKAELEIRQLHQKIDHILSHQWERLIEIQKIQMELIDEIRNNN HHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA