| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356345
Identifier: 119356345
GI number: 119356345
Start: 558304
End: 559254
Strand: Reverse
Name: 119356345
Synonym: Cpha266_0508
Alternate gene names: NA
Gene position: 559254-558304 (Counterclockwise)
Preceding gene: 119356353
Following gene: 119356344
Centisome position: 17.85
GC content: 48.79
Gene sequence:
>951_bases ATGCAAAAGGCCGATCTTTTGAACCGGATAAAAAAGGCAACAATGCTTCAGTTAAGAACTGCCGGTTTTCAGGCACTGCA AAAGCTTGAAAGAGAGCGCGACTTTCCCCCAGCATGGAACAGCATGAAAGAACTTGAAGTGGTGACAAATAATTTTCACC AAAGGTTTCTTGACGAACGTTTCGAACAGTCGAAATCGCTGGGAGGGTTCTTCCTGCTCAATGAGCTGCTTGACAGGGCG CTGCGAAGCAGTGAAACTGAAAACATGGATAACGAAAACCTCTCGGGCGATGAAAAACTCACACTGGTTAAGGCTCTTGA CCGTCAAAACGAGATGATGGGACTTTATAATCGTTATCCCGCCATTATTCTCCCCCTGGCAGAGGAAATCGCAAGAAAAG AAAACCGATCGATACGACTGCTTGAACTTGCAAGCGGATCGGGTGGGCTGGCCCTTGCCCTGGCACATGCGGCGAAAATA AAAAACATCCCACTTTCTGTTACCGGCTCCGATATCGTCCCTGCATATCAGGATGAGGCAAACCGGCTTGCGGATGAAAA ACAACTCCCGGTCACGTTCCGCATCATCAATGCGTTTGATATGGATCGATCGATAACCGAACCTTTTGATCTTGTGGTTA TTTCCCAGAGCCTCCATCATTTCACTCCCGGCCAGCTTGCAATGATAATAGCACAAGCCGGAAAACAGGCATCAACGTTA TTTATCGGTATAGACGGCTACCGTGACCCGCTGCTCATGGCCGGAGTTCCGCTGACAGCCAGCTTGCAGGGAATCCCGTC GTTCACCCTTGACGGATTTATCTCTGCAAGAAAATTCTACTCGAACATCGAACTCGATATCATTGCCGGAATCGCAAAAG GCCGCGGAAGTCACAGCGTCCAGTGTTCATGGCCCATGAGTGTTATGACGGTTGACTTCAAACCGGAGTAG
Upstream 100 bases:
>100_bases AATGATCGATATTATAGAACAACAGAAGAAAAAAAAGCAGTGTTTCAGATACGCGGCGAGCTGGTTATATTAAGGTACAT ATCCTTTTGCCGACGATCTC
Downstream 100 bases:
>100_bases CCCGACAAGTCGAAAAAAAGGTACACAAACAAGTCGGATGCTTCAACGCATAAGATGCGTGAACACACTGACGAATCATC AGTAAATCCGAACACAAACA
Product: methyltransferase type 12
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MQKADLLNRIKKATMLQLRTAGFQALQKLERERDFPPAWNSMKELEVVTNNFHQRFLDERFEQSKSLGGFFLLNELLDRA LRSSETENMDNENLSGDEKLTLVKALDRQNEMMGLYNRYPAIILPLAEEIARKENRSIRLLELASGSGGLALALAHAAKI KNIPLSVTGSDIVPAYQDEANRLADEKQLPVTFRIINAFDMDRSITEPFDLVVISQSLHHFTPGQLAMIIAQAGKQASTL FIGIDGYRDPLLMAGVPLTASLQGIPSFTLDGFISARKFYSNIELDIIAGIAKGRGSHSVQCSWPMSVMTVDFKPE
Sequences:
>Translated_316_residues MQKADLLNRIKKATMLQLRTAGFQALQKLERERDFPPAWNSMKELEVVTNNFHQRFLDERFEQSKSLGGFFLLNELLDRA LRSSETENMDNENLSGDEKLTLVKALDRQNEMMGLYNRYPAIILPLAEEIARKENRSIRLLELASGSGGLALALAHAAKI KNIPLSVTGSDIVPAYQDEANRLADEKQLPVTFRIINAFDMDRSITEPFDLVVISQSLHHFTPGQLAMIIAQAGKQASTL FIGIDGYRDPLLMAGVPLTASLQGIPSFTLDGFISARKFYSNIELDIIAGIAKGRGSHSVQCSWPMSVMTVDFKPE >Mature_316_residues MQKADLLNRIKKATMLQLRTAGFQALQKLERERDFPPAWNSMKELEVVTNNFHQRFLDERFEQSKSLGGFFLLNELLDRA LRSSETENMDNENLSGDEKLTLVKALDRQNEMMGLYNRYPAIILPLAEEIARKENRSIRLLELASGSGGLALALAHAAKI KNIPLSVTGSDIVPAYQDEANRLADEKQLPVTFRIINAFDMDRSITEPFDLVVISQSLHHFTPGQLAMIIAQAGKQASTL FIGIDGYRDPLLMAGVPLTASLQGIPSFTLDGFISARKFYSNIELDIIAGIAKGRGSHSVQCSWPMSVMTVDFKPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35256; Mature: 35256
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKADLLNRIKKATMLQLRTAGFQALQKLERERDFPPAWNSMKELEVVTNNFHQRFLDER CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH FEQSKSLGGFFLLNELLDRALRSSETENMDNENLSGDEKLTLVKALDRQNEMMGLYNRYP HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC AIILPLAEEIARKENRSIRLLELASGSGGLALALAHAAKIKNIPLSVTGSDIVPAYQDEA EEEEHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHH NRLADEKQLPVTFRIINAFDMDRSITEPFDLVVISQSLHHFTPGQLAMIIAQAGKQASTL HHHHCCCCCCEEEEEEEHHCCCCCCCCCHHEEEEEHHHHCCCCHHHHHHHHHCCCCCEEE FIGIDGYRDPLLMAGVPLTASLQGIPSFTLDGFISARKFYSNIELDIIAGIAKGRGSHSV EEEECCCCCCCEEECCCCEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCEE QCSWPMSVMTVDFKPE EEECCCEEEEEECCCC >Mature Secondary Structure MQKADLLNRIKKATMLQLRTAGFQALQKLERERDFPPAWNSMKELEVVTNNFHQRFLDER CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH FEQSKSLGGFFLLNELLDRALRSSETENMDNENLSGDEKLTLVKALDRQNEMMGLYNRYP HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC AIILPLAEEIARKENRSIRLLELASGSGGLALALAHAAKIKNIPLSVTGSDIVPAYQDEA EEEEHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHH NRLADEKQLPVTFRIINAFDMDRSITEPFDLVVISQSLHHFTPGQLAMIIAQAGKQASTL HHHHCCCCCCEEEEEEEHHCCCCCCCCCHHEEEEEHHHHCCCCHHHHHHHHHCCCCCEEE FIGIDGYRDPLLMAGVPLTASLQGIPSFTLDGFISARKFYSNIELDIIAGIAKGRGSHSV EEEECCCCCCCEEECCCCEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCEE QCSWPMSVMTVDFKPE EEECCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA