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The map label for this gene is 119356346

Identifier: 119356346

GI number: 119356346

Start: 559546

End: 560040

Strand: Direct

Name: 119356346

Synonym: Cpha266_0509

Alternate gene names: NA

Gene position: 559546-560040 (Clockwise)

Preceding gene: 119356337

Following gene: 119356347

Centisome position: 17.85

GC content: 48.08

Gene sequence:

>495_bases
ATGAAAGTACTGACAAAAAATACCGATTACGCGATACGCGCGCTGCTCTTTCTTGGAGCAAGAAAAGGGAGTTATGTATC
GGCAAAAACCATTGCTGCTGAACAGGAGATCCCATACCAGTTTTTACGCAGACTCATGCAGGATATGATCGGTCATGGAC
TGGTTGTCTCGAAGGGCGGGGCAAGCGGCGGCTTCATGCTTTTGAAGGAACCCGACGGGATCAGGATTAACGATCTGATA
GAGATTTTTCAGGGAAAGATTCAGGTTTCGGAATGCATGTTTCGAAAGAAGCTCTGTTCGAACAGGGCTACTTGTGTGCT
GCGTCACGAGATTATGCGTATCGAGCAGGTGGTTCATCAGGAGTTTGAAAAGGTAACCATCGGAAAGCTTATGCGCGATC
TTGACGAGGCTCGTTTGCGTCTTTCCGGTGTCGAACCTGATACACAAAAGAGTATGCCTCAGCATGGCGCGGAAAATCAA
GGGGGGAACATATGA

Upstream 100 bases:

>100_bases
CAGGATGCGGGTTAAAAAAAACAAAAGAGATGAAACGAATTAAAATTGTTTTTTGTATTTATATAAATCTGATACTAAAT
TAGTATCAATTAGATTACCT

Downstream 100 bases:

>100_bases
AACGACAGATTATTGCGATAGATGAAAAAAAATGTACTGGTTGCGGCGACTGTATTCCCGGTTGTCCTGAAGGTGCCCTG
CAGGTGATTGACGGTAAGGC

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKVLTKNTDYAIRALLFLGARKGSYVSAKTIAAEQEIPYQFLRRLMQDMIGHGLVVSKGGASGGFMLLKEPDGIRINDLI
EIFQGKIQVSECMFRKKLCSNRATCVLRHEIMRIEQVVHQEFEKVTIGKLMRDLDEARLRLSGVEPDTQKSMPQHGAENQ
GGNI

Sequences:

>Translated_164_residues
MKVLTKNTDYAIRALLFLGARKGSYVSAKTIAAEQEIPYQFLRRLMQDMIGHGLVVSKGGASGGFMLLKEPDGIRINDLI
EIFQGKIQVSECMFRKKLCSNRATCVLRHEIMRIEQVVHQEFEKVTIGKLMRDLDEARLRLSGVEPDTQKSMPQHGAENQ
GGNI
>Mature_164_residues
MKVLTKNTDYAIRALLFLGARKGSYVSAKTIAAEQEIPYQFLRRLMQDMIGHGLVVSKGGASGGFMLLKEPDGIRINDLI
EIFQGKIQVSECMFRKKLCSNRATCVLRHEIMRIEQVVHQEFEKVTIGKLMRDLDEARLRLSGVEPDTQKSMPQHGAENQ
GGNI

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 18449; Mature: 18449

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLTKNTDYAIRALLFLGARKGSYVSAKTIAAEQEIPYQFLRRLMQDMIGHGLVVSKGG
CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCC
ASGGFMLLKEPDGIRINDLIEIFQGKIQVSECMFRKKLCSNRATCVLRHEIMRIEQVVHQ
CCCCEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
EFEKVTIGKLMRDLDEARLRLSGVEPDTQKSMPQHGAENQGGNI
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKVLTKNTDYAIRALLFLGARKGSYVSAKTIAAEQEIPYQFLRRLMQDMIGHGLVVSKGG
CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCC
ASGGFMLLKEPDGIRINDLIEIFQGKIQVSECMFRKKLCSNRATCVLRHEIMRIEQVVHQ
CCCCEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
EFEKVTIGKLMRDLDEARLRLSGVEPDTQKSMPQHGAENQGGNI
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]